Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF643 Gene 0 12.79 16.06 22.14 27.79 30.45 38.80 35.33 25.79 34.11 36.27 21.13 18.01 52.93 12.46 8.33 8.94 26.64 23.82 15.37 38.52 9.92 32.74 13.29 2 419492 Transcript 0 1.67 4.08 2.68 0.00 1.34 2.41 4.26 6.85 2.55 3.42 2.07 0.00 3.41 6.12 0.00 0.00 1.92 6.05 0.00 0.00 0.28 4.10 2.05 3 469416 Transcript 0 5.41 5.54 5.54 9.65 10.57 4.04 14.02 3.78 14.47 5.95 3.95 0.75 1.42 3.35 0.88 3.72 2.47 10.29 7.36 12.03 3.25 5.47 2.37 4 235657 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 484445 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 361584 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 411995 Transcript 0 0.00 0.00 0.61 3.41 0.00 0.00 0.00 0.00 1.85 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 8 431552 Transcript 0 0.00 0.00 17.56 17.31 0.00 0.00 0.00 14.50 11.49 16.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.37 0.00 0.00 0.00 0.00 0.00 9 ER1a ExonRegion 0 0.00 2.03 0.00 0.00 2.68 0.00 0.00 0.43 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 3.23 0.00 0.00 0.55 0.00 0.00 10 ER1b ExonRegion 0 0.00 2.03 0.00 0.00 2.68 0.00 0.00 3.11 0.00 0.00 2.71 0.00 0.00 0.00 0.00 0.00 3.96 5.17 0.64 0.00 2.20 0.00 0.00 11 ER1c ExonRegion 0 3.17 2.78 2.81 1.34 5.23 11.30 6.35 7.50 3.41 4.55 5.40 0.00 0.00 5.42 3.24 4.76 10.34 20.19 4.73 9.76 10.05 2.21 4.66 12 E1a_E2a KnownJunction 0 0.00 0.00 4.88 3.30 8.49 5.79 4.20 15.28 11.40 16.68 5.32 0.00 0.00 5.36 0.00 8.72 17.77 39.42 0.00 14.32 14.52 5.76 0.00 13 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E2_Ab NovelBoundary 0 2.96 0.00 0.00 3.16 0.00 9.77 3.58 8.46 7.12 14.91 7.21 0.00 0.00 0.00 0.00 0.00 7.48 15.92 4.14 7.86 9.76 2.51 10.50 15 ER2a ExonRegion 0 3.60 0.00 3.68 2.04 5.35 9.54 5.43 13.14 9.88 10.67 5.80 0.00 0.00 3.41 1.45 5.94 16.83 28.82 0.96 13.83 15.65 6.25 8.81 16 ER2b ExonRegion 0 2.55 4.88 8.96 9.03 8.75 19.92 13.31 15.58 21.05 19.08 14.87 1.44 4.86 11.08 3.26 5.79 23.65 32.24 7.55 27.77 14.37 10.90 11.65 17 E2_Ac KnownBoundary 0 3.11 6.25 8.46 14.95 16.98 23.57 16.87 20.45 21.09 15.98 9.32 0.00 8.28 2.83 4.45 0.00 24.68 40.25 8.28 31.51 11.24 13.41 11.44 18 ER2c ExonRegion 0 9.33 5.04 11.59 10.41 4.74 29.38 15.77 12.30 22.29 18.98 17.13 0.00 8.95 7.97 6.20 10.81 26.71 46.74 12.96 30.66 23.79 13.83 5.01 19 E2a_E3a KnownJunction 0 7.56 0.00 13.60 5.59 8.32 12.32 10.33 6.04 19.62 17.62 11.48 0.00 6.82 9.83 0.00 7.52 4.77 31.84 4.42 30.49 14.58 6.25 7.77 20 E2a_E4a KnownJunction 0 6.22 0.00 1.66 1.63 0.00 5.56 14.00 1.64 6.31 7.06 5.26 0.00 0.00 8.18 4.94 11.36 13.28 20.81 4.80 14.00 16.87 11.51 0.00 21 ER3a ExonRegion 0 6.72 6.74 11.30 5.29 14.75 15.08 10.59 7.48 17.68 22.32 8.14 4.78 4.31 8.20 1.48 2.21 20.30 27.95 6.48 22.17 13.63 4.85 14.51 22 E3a_E4a KnownJunction 0 10.37 5.39 3.93 10.75 8.32 16.64 10.11 7.52 8.83 15.63 4.47 0.00 0.00 19.13 4.45 3.76 13.84 14.59 3.58 12.66 13.10 5.63 28.08 23 ER4a ExonRegion 0 12.92 15.48 7.19 12.19 9.48 33.72 21.84 17.05 20.44 31.05 13.94 5.97 17.58 15.68 5.07 8.82 17.31 33.39 13.37 38.43 20.75 17.47 18.52 24 E4_Da KnownBoundary 0 7.56 9.80 4.64 8.42 0.00 0.00 10.55 6.70 17.27 5.43 4.21 12.60 0.00 4.94 0.00 0.00 0.00 14.22 7.72 13.29 5.81 8.45 3.76 25 E4a_E4c KnownJunction 0 3.33 6.12 5.35 0.00 0.00 4.83 8.52 13.27 5.09 6.85 2.68 0.00 6.82 12.24 0.00 0.00 3.83 8.87 0.00 0.00 0.00 8.21 4.10 26 E4a_E4d KnownJunction 0 0.00 6.31 2.96 2.06 7.47 16.35 2.12 13.02 8.54 13.51 7.00 6.90 5.84 7.42 10.63 3.59 16.64 21.10 12.89 12.66 17.42 13.66 3.84 27 ER4b ExonRegion 0 5.41 5.54 5.54 9.65 10.57 4.04 14.02 3.78 14.47 5.95 3.95 0.75 1.42 3.35 0.88 3.72 2.47 10.29 7.36 12.03 3.25 5.47 2.37 28 E4_Ab KnownBoundary 0 7.19 0.00 10.29 12.22 4.33 0.00 14.49 5.09 12.24 7.04 5.26 0.00 0.00 0.00 0.00 6.92 0.00 24.13 8.85 9.14 2.41 5.69 4.35 29 ER4c ExonRegion 0 7.66 1.09 7.82 11.31 6.23 10.15 13.73 8.21 8.25 11.37 2.63 1.39 1.54 1.64 0.93 3.97 8.74 15.46 7.34 12.77 1.83 4.33 2.94 30 E4_Ac KnownBoundary 0 7.19 0.00 3.02 5.46 0.00 0.00 7.68 1.81 4.22 4.70 4.42 0.00 0.00 0.00 0.00 0.00 4.30 2.49 0.00 5.05 0.00 3.00 0.00 31 E4_Ad KnownBoundary 0 0.00 0.00 1.54 0.00 0.00 0.00 4.42 2.30 1.77 7.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.43 0.00 6.14 0.00 2.63 0.00 32 ER4d ExonRegion 0 8.47 14.24 8.17 12.27 6.24 18.34 18.98 12.68 16.47 22.56 9.66 1.44 7.82 11.91 4.84 6.93 16.50 28.95 10.62 19.15 5.14 12.50 6.85 33 ER4e ExonRegion 0 7.03 17.17 16.18 14.07 23.06 38.46 24.34 23.54 22.67 26.65 11.88 7.51 20.97 13.90 6.57 8.83 45.24 45.22 21.74 33.35 13.35 19.30 19.52 34 E4_Db KnownBoundary 0 3.78 20.39 7.33 8.19 45.93 45.03 27.69 13.84 18.49 12.33 7.53 0.00 12.82 15.66 0.00 8.20 50.21 35.19 18.26 23.91 5.75 14.45 28.60 35 E4_Dc KnownBoundary 0 3.78 0.00 5.50 2.06 8.66 8.69 4.50 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 7.71 4.71 3.26 3.15 3.06 0.00 36 E4c_E4e KnownJunction 0 0.00 0.00 17.56 17.31 0.00 0.00 0.00 14.50 11.49 16.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.37 0.00 0.00 0.00 0.00 0.00 37 E4_Ae KnownBoundary 0 3.78 5.59 11.09 20.91 12.90 20.05 14.26 11.34 14.24 25.30 7.84 0.00 0.00 17.60 0.00 8.46 9.26 16.58 9.41 12.08 11.00 10.90 3.50 38 ER4f ExonRegion 0 8.47 18.16 22.06 20.54 35.17 42.31 26.29 20.12 23.73 31.87 12.01 8.97 21.44 17.17 2.90 18.05 50.69 47.65 21.61 36.47 12.59 20.24 21.40 39 ER4g ExonRegion 0 8.47 12.20 24.51 24.80 42.28 42.91 25.42 20.40 30.14 35.78 13.14 8.66 26.26 24.04 7.54 18.43 34.99 41.02 20.39 39.57 13.22 24.59 17.62 40 ER4h ExonRegion 0 4.64 11.38 20.71 26.19 37.91 36.20 22.95 23.70 36.52 51.91 15.88 7.32 40.76 18.52 12.36 22.64 25.70 36.74 10.92 41.59 22.56 27.43 12.66 41 E4d_E5a KnownJunction 0 6.37 19.40 15.76 20.88 30.48 40.37 24.64 30.19 37.41 68.82 15.85 6.15 62.01 9.36 10.75 26.75 24.12 35.73 11.58 53.88 22.43 29.21 19.46 42 E5_Aa NovelBoundary 0 3.78 6.38 2.84 12.65 7.81 2.90 20.45 5.01 6.42 6.82 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 0.00 0.00 43 ER5a ExonRegion 0 19.47 24.89 32.13 42.32 48.34 59.19 54.63 37.62 48.23 51.72 31.62 32.00 97.03 15.98 13.02 11.44 35.99 21.05 21.36 51.71 8.49 50.52 16.48 44 E5_Da KnownBoundary 0 17.26 33.61 64.25 65.36 77.50 28.39 42.53 30.23 63.31 64.25 26.95 38.56 72.24 17.25 0.00 18.46 30.20 20.40 3.86 50.62 5.25 62.70 20.06 45 ER5b ExonRegion 0 14.05 18.86 53.96 59.49 44.87 24.77 43.88 37.21 57.40 57.58 17.69 26.79 50.20 11.71 9.41 9.63 14.80 21.20 22.02 50.11 2.20 74.41 13.68 46 E5_Db KnownBoundary 0 19.86 32.63 52.93 62.36 24.70 26.46 41.51 52.86 48.12 57.78 25.27 30.61 19.97 2.47 18.05 7.35 13.18 26.99 4.14 43.14 5.93 69.99 12.55 47 ER5c ExonRegion 0 8.09 11.60 21.55 19.00 9.52 11.00 16.08 14.90 15.33 14.44 10.63 13.24 9.79 0.81 6.74 2.97 6.02 7.55 2.90 16.21 2.20 35.36 8.21 48 ER5d ExonRegion 0 4.23 4.07 5.51 5.45 0.00 0.00 1.32 1.73 6.18 1.15 1.93 0.00 4.69 0.00 1.45 2.97 0.00 0.00 0.00 4.26 0.00 8.33 1.47 49 ER5e ExonRegion 0 0.00 0.00 0.61 3.41 0.00 0.00 0.00 0.00 1.85 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 50 IG42 Intergenic 0 10.79 16.35 14.01 20.42 30.06 20.66 18.41 17.50 20.59 20.62 4.76 8.55 20.04 4.56 3.71 1.95 3.96 8.68 8.09 16.32 2.78 16.98 4.65 51 IG42_AR2 ActiveIntergenicRegion 0 25.13 35.82 24.25 39.71 61.02 48.85 37.45 36.20 45.08 47.88 12.45 20.25 48.13 10.33 8.65 4.26 8.68 14.04 13.89 32.41 6.08 43.29 9.91