Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PTP4A2	Gene	0	346.96	153.03	112.25	119.28	370.68	214.60	262.22	282.80	225.03	257.69	473.21	436.94	344.85	336.09	296.42	191.42	201.80	72.51	79.78	103.56	300.24	528.44	262.46
2	468531	Transcript	0	0.11	0.02	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.12	0.00	0.00	0.00	0.00	2.18	0.00	0.00	0.00	0.00	0.09	0.21	0.02	0.00
3	344035	Transcript	0	570.97	186.60	167.48	170.65	556.40	304.83	373.20	383.90	295.23	343.69	802.88	864.88	1097.56	597.11	565.88	435.56	393.58	165.00	164.52	166.21	532.32	717.15	500.98
4	457805	Transcript	0	89.79	33.35	44.41	20.21	91.68	35.60	48.27	70.48	47.63	66.11	193.84	180.51	123.53	157.93	169.23	93.48	72.37	14.96	4.80	21.48	107.49	95.40	61.97
5	356536	Transcript	0	9.11	0.00	3.19	3.13	19.44	12.44	4.33	2.42	8.80	7.71	9.53	13.80	13.31	19.72	4.45	4.36	8.13	0.00	0.00	3.26	11.80	0.00	3.76
6	494444	Transcript	0	5.94	0.65	0.00	4.72	9.81	3.12	8.47	5.81	5.37	3.64	15.71	7.43	6.28	8.55	12.17	7.12	4.01	3.33	2.86	6.21	16.77	8.92	6.18
7	475464	Transcript	0	5.79	1.64	1.82	3.73	5.13	1.52	3.12	1.20	1.05	1.01	1.45	4.69	7.64	2.54	5.46	2.26	4.50	0.26	2.32	0.89	6.92	2.77	8.63
8	484483	Transcript	0	43.58	4.69	3.92	5.13	21.45	7.42	10.50	10.53	8.06	5.06	12.04	11.29	9.68	4.05	14.98	9.92	11.77	1.99	1.40	0.38	14.78	4.23	8.82
9	470404	Transcript	0	0.00	0.00	2.69	0.00	0.00	0.00	0.00	1.60	1.36	0.00	2.11	0.00	0.00	10.89	4.45	3.67	0.00	0.00	0.00	0.00	0.00	12.25	4.10
10	489313	Transcript	0	16.92	1.21	2.67	2.35	11.67	4.24	9.76	5.49	4.86	3.86	8.11	9.56	8.65	5.39	7.13	4.83	6.10	1.79	0.86	2.30	7.98	3.99	7.79
11	ER1a	ExonRegion	0	0.22	0.04	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.24	0.00	0.00	0.00	0.00	4.35	0.00	0.00	0.00	0.00	0.18	0.41	0.04	0.00
12	E1a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER2b	ExonRegion	1	4.75	2.62	1.26	1.66	6.55	10.25	7.82	3.56	4.72	4.60	115.68	9.64	18.49	37.76	27.83	20.43	37.30	9.33	5.72	5.16	93.77	15.24	28.68
15	E2_Ac	KnownBoundary	1	77.35	42.69	19.46	31.10	94.31	51.62	57.32	68.76	62.30	72.50	235.32	63.77	118.99	350.29	331.17	192.17	76.02	118.72	60.05	80.92	254.65	285.35	198.04
16	ER2c	ExonRegion	1	85.12	45.88	33.02	51.47	92.53	67.55	87.41	152.67	129.24	153.08	472.54	64.94	55.60	580.25	404.91	285.43	222.78	132.94	70.83	121.66	442.95	443.11	323.14
17	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	1.83	0.00	0.00	0.00	1.56	1.30	1.18	0.00	0.00	0.00	5.47	0.00	7.18	0.00	1.87	0.00	0.00	11.49	0.00	0.00
18	E2a_E8a	KnownJunction	1	61.34	82.49	49.76	77.51	131.07	95.91	127.72	230.26	204.71	249.31	677.07	106.68	53.24	671.91	300.27	325.04	392.99	157.61	73.60	165.93	654.90	440.21	326.34
19	E2a_E10a	NovelJunction	0	0.00	0.00	1.83	0.00	3.82	0.00	0.00	5.83	5.35	5.59	22.53	0.00	7.63	12.24	14.96	16.06	4.77	1.78	0.00	0.00	8.59	0.00	8.19
20	ER3a	ExonRegion	0	0.00	0.00	0.26	0.00	0.00	0.00	0.00	0.00	0.00	0.20	0.00	0.00	0.00	1.10	0.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.21
21	ER4a	ExonRegion	0	6.08	1.46	1.21	0.00	7.61	3.87	7.51	0.00	0.00	1.15	2.78	7.68	30.65	6.27	14.83	6.40	11.72	0.00	2.29	3.06	6.33	2.99	14.68
22	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER5a	ExonRegion	0	0.07	0.00	0.00	0.05	0.18	0.19	0.23	0.06	0.00	0.08	0.00	0.00	0.32	0.11	0.10	0.00	0.46	0.00	0.00	0.00	0.46	0.14	0.00
24	ER6a	ExonRegion	0	10.69	1.94	0.00	8.20	20.93	9.35	20.89	9.99	13.38	8.10	24.66	22.29	18.85	8.04	20.18	9.82	12.02	5.76	4.44	9.23	29.99	12.74	18.54
25	E6a_E8a	KnownJunction	0	7.11	0.00	0.00	4.13	8.49	0.00	4.50	5.87	1.42	1.64	22.48	0.00	0.00	12.13	16.32	4.36	0.00	2.36	4.14	9.40	8.83	14.02	0.00
26	ER7a	ExonRegion	0	25.03	8.41	9.44	18.21	22.96	5.06	10.99	7.11	6.32	4.64	5.94	20.45	14.89	7.75	17.60	7.17	14.81	1.59	11.64	2.27	30.03	10.39	33.12
27	E7a_E8a	KnownJunction	0	3.56	0.00	0.00	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.70	3.12	3.76
28	ER8a	ExonRegion	1	133.79	56.06	67.60	94.16	180.94	171.73	202.61	229.56	257.43	268.89	738.69	142.73	87.08	531.07	318.85	221.09	366.66	88.38	41.73	145.82	669.10	383.67	260.84
29	E8_Da	KnownBoundary	1	315.61	78.93	121.49	100.79	256.45	231.51	249.83	324.61	300.98	321.91	1077.33	212.77	192.20	588.38	315.35	302.23	325.76	142.48	33.51	152.38	810.27	541.37	315.67
30	ER8b	ExonRegion	0	626.73	277.15	149.17	193.92	685.75	401.67	504.94	532.23	461.54	514.30	1473.76	1058.28	880.83	882.56	725.99	475.71	551.32	133.23	134.96	220.04	551.70	1453.55	538.64
31	E8_Db	KnownBoundary	0	469.49	148.39	136.36	145.90	429.54	255.53	532.43	342.80	332.23	348.00	1078.17	472.95	507.27	329.92	333.77	222.59	373.35	35.73	73.32	126.62	325.63	849.68	245.42
32	E8b_E8b	NovelJunction	0	0.00	0.00	177.08	134.71	0.00	0.00	0.00	417.31	409.89	502.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	37.76	0.00	0.00	0.00	0.00	0.00
33	E8_Ab	KnownBoundary	0	542.02	154.18	105.56	88.13	492.45	329.07	440.21	324.28	252.69	306.74	739.61	547.08	337.80	287.54	184.68	190.29	185.79	27.32	51.20	96.07	212.27	487.72	162.53
34	ER8c	ExonRegion	0	869.47	301.38	244.83	249.68	902.80	581.68	877.79	824.47	713.40	798.25	2070.13	1556.01	1232.54	1000.78	753.17	444.63	631.13	93.50	128.05	218.30	621.01	1436.79	467.51
35	ER8d	ExonRegion	0	1377.03	422.15	233.82	238.42	1095.91	593.93	846.82	778.58	652.12	750.24	1762.17	1972.82	1457.64	1136.92	859.19	616.81	613.70	141.41	157.51	242.29	556.46	2242.04	730.27
36	E8_Ac	KnownBoundary	0	2118.89	645.81	221.75	264.80	1406.11	579.16	954.84	650.74	534.86	606.41	1655.37	2283.29	1899.55	1337.34	1272.39	854.90	754.74	182.48	266.08	292.74	614.87	3322.77	1099.90
37	ER8e	ExonRegion	0	1177.35	427.89	242.12	237.23	834.40	521.84	647.36	599.38	527.81	570.53	1887.62	2038.22	2048.41	1292.23	1116.47	732.93	752.50	209.77	240.82	270.78	980.29	1671.95	845.02
38	E8c_E9a	KnownJunction	0	680.57	317.71	230.06	176.67	671.14	501.36	705.28	511.29	394.06	472.72	1817.35	1890.62	1985.91	1155.52	853.58	381.35	732.77	142.43	134.50	253.37	930.80	903.99	505.18
39	E8c_E10a	KnownJunction	0	89.79	33.35	44.41	20.21	91.68	35.60	48.27	70.48	47.63	66.11	193.84	180.51	123.53	157.93	169.23	93.48	72.37	14.96	4.80	21.48	107.49	95.40	61.97
40	ER9a	ExonRegion	0	746.61	224.42	239.46	229.74	879.72	544.18	693.73	536.68	491.06	517.11	1774.09	1975.21	2127.71	1401.11	1040.49	643.86	769.29	247.18	221.06	307.02	984.11	1060.38	732.99
41	E9_Da	KnownBoundary	0	20.82	5.26	3.67	2.06	3.90	10.39	0.00	22.88	5.84	7.09	21.01	34.66	20.45	4.77	22.25	8.29	4.02	0.00	0.00	2.75	3.15	2.33	3.33
42	E9a_E10a	KnownJunction	1	1228.96	271.40	291.15	286.38	1076.83	604.37	742.46	710.29	554.10	653.79	2054.63	2186.51	3067.01	1519.17	1389.83	1133.63	1014.30	397.79	377.42	361.13	1262.67	1502.00	1190.05
43	E9a_E11b	KnownJunction	0	0.00	0.00	2.69	0.00	0.00	0.00	0.00	1.60	1.36	0.00	2.11	0.00	0.00	10.89	4.45	3.67	0.00	0.00	0.00	0.00	0.00	12.25	4.10
44	E9a_E12a	KnownJunction	0	9.11	0.00	3.19	3.13	19.44	12.44	4.33	2.42	8.80	7.71	9.53	13.80	13.31	19.72	4.45	4.36	8.13	0.00	0.00	3.26	11.80	0.00	3.76
45	ER9b	ExonRegion	0	43.58	4.69	3.92	5.13	21.45	7.42	10.50	10.53	8.06	5.06	12.04	11.29	9.68	4.05	14.98	9.92	11.77	1.99	1.40	0.38	14.78	4.23	8.82
46	E9b_E12a	NovelJunction	0	53.94	14.87	15.85	10.42	12.56	15.22	20.05	3.16	10.13	6.21	22.43	0.00	29.22	7.00	4.33	10.08	15.15	13.10	14.31	14.83	14.21	16.53	12.89
47	ER10a	ExonRegion	0	542.51	157.63	258.25	249.12	712.36	467.60	504.96	647.47	549.56	645.04	2041.92	1789.62	1824.24	1513.82	1235.07	896.13	867.40	342.72	222.44	325.43	1206.10	1235.92	941.68
48	E10a_E11b	KnownJunction	0	379.47	170.50	237.69	204.34	409.76	345.48	441.36	587.40	513.68	607.83	1792.45	1054.09	975.42	1100.01	1071.89	594.72	655.91	254.98	211.39	291.65	1168.77	826.10	562.29
49	E10a_E12a	NovelJunction	0	13.04	3.35	11.44	7.13	15.28	16.13	13.82	23.95	35.21	11.77	47.85	24.61	52.43	33.73	56.86	26.92	17.39	1.91	0.00	9.01	20.63	13.84	39.61
50	ER11a	ExonRegion	0	16.92	1.21	2.67	2.35	11.67	4.24	9.76	5.49	4.86	3.86	8.11	9.56	8.65	5.39	7.13	4.83	6.10	1.79	0.86	2.30	7.98	3.99	7.79
51	E11_Ab	KnownBoundary	0	6.82	0.00	9.58	1.76	12.90	2.33	0.00	8.83	2.23	1.67	12.85	6.90	6.82	0.00	0.00	0.00	9.16	0.00	0.00	6.52	11.92	0.00	11.27
52	ER11b	ExonRegion	0	432.34	137.82	244.99	196.42	598.68	489.85	499.63	600.87	469.84	558.67	1488.93	1040.71	1364.80	1250.55	1084.09	533.42	594.61	209.40	162.54	247.96	980.86	875.30	603.96
53	E11a_E12a	KnownJunction	0	818.44	167.86	278.41	218.92	829.20	591.99	736.94	816.88	611.77	718.91	1422.04	1234.45	1833.48	1367.95	1082.39	628.81	706.87	166.85	188.52	246.27	1111.19	1024.93	751.62
54	ER12a	ExonRegion	0	956.12	241.95	182.70	166.20	613.76	434.81	514.42	567.86	464.35	535.63	1335.31	878.57	813.51	911.34	849.90	507.25	550.17	117.05	163.20	221.22	727.09	1109.68	575.97
55	E12_Da	KnownBoundary	0	1870.11	342.11	183.82	171.31	691.09	448.43	582.20	505.29	392.01	439.97	605.84	610.40	407.12	523.22	515.61	219.86	213.65	46.10	100.14	154.23	184.34	940.55	322.84
56	ER12b	ExonRegion	0	1151.35	298.75	155.04	157.67	924.98	613.02	714.75	526.49	390.14	452.59	550.63	843.85	433.44	483.87	391.67	207.51	210.36	61.31	112.99	127.85	147.53	995.16	349.51
57	E12_Db	KnownBoundary	1	617.07	263.18	153.28	176.00	1117.23	789.55	949.32	543.08	397.94	462.75	294.44	966.16	486.82	403.97	195.19	192.09	215.90	55.59	106.17	142.34	105.52	980.41	334.88
58	ER12c	ExonRegion	0	402.38	144.75	101.05	107.41	514.92	307.20	379.84	377.20	277.10	364.79	399.34	555.04	266.04	313.08	154.43	210.41	204.83	67.88	110.30	122.75	331.00	729.78	357.36
59	E12_Dc	KnownBoundary	0	2.82	0.00	0.00	0.00	0.00	0.00	3.44	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.39	0.00
60	ER12d	ExonRegion	0	483.95	288.41	211.28	225.58	592.39	310.11	377.13	441.42	331.57	377.28	352.08	408.13	225.68	272.17	307.81	173.05	166.44	97.20	116.13	137.50	334.29	649.46	312.91