Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AKIRIN1 Gene 0 133.49 92.55 179.30 93.80 240.33 160.19 200.40 206.22 218.43 212.42 298.47 332.58 187.83 352.42 273.82 237.51 214.40 60.03 89.90 82.48 157.64 238.86 170.53 2 446189 Transcript 0 3.14 1.05 1.21 0.61 10.08 1.56 2.21 4.19 3.89 2.13 1.88 4.55 2.53 2.53 4.34 2.91 1.59 0.00 1.22 0.71 6.69 1.90 4.92 3 432648 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 372984 Transcript 0 0.00 0.00 0.00 2.03 0.00 0.00 0.00 0.00 1.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 372975 Transcript 0 0.53 0.25 0.77 0.34 3.01 0.00 1.16 0.00 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 372976 Transcript 1 91.05 92.09 177.91 129.82 164.86 139.75 287.63 192.14 227.80 225.61 340.82 78.48 30.03 56.15 106.81 395.20 286.86 106.00 158.97 110.19 172.17 372.24 193.77 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 1.23 0.24 1.11 0.00 0.00 5.84 2.49 0.20 0.80 0.91 15.19 0.00 0.00 10.95 10.39 0.14 8.60 0.43 0.07 0.74 6.05 2.52 6.21 9 E1_Ac KnownBoundary 0 6.15 0.00 6.33 0.00 0.00 9.48 9.67 1.85 10.82 4.75 35.75 5.40 0.00 19.54 17.80 11.02 21.41 7.96 0.00 2.56 16.31 5.88 25.18 10 ER1c ExonRegion 1 3.88 5.56 12.90 2.35 11.17 22.64 14.12 15.18 15.45 27.12 83.50 14.47 18.13 115.54 57.88 49.90 75.43 20.05 26.84 16.41 76.78 32.69 52.08 11 E1a_E2a KnownJunction 1 3.78 8.68 44.38 22.91 66.81 54.23 34.23 63.05 69.24 95.98 220.06 24.31 39.77 264.29 97.04 115.61 141.19 37.27 41.32 56.25 148.95 60.01 70.51 12 E1a_E3a KnownJunction 0 0.00 0.00 0.00 2.03 0.00 0.00 0.00 0.00 1.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 I1 Intron 0 38.66 11.63 30.57 19.45 50.99 28.16 49.50 33.06 44.50 27.00 31.64 59.52 71.94 38.80 41.52 54.20 37.72 10.90 13.61 21.65 22.38 37.06 45.74 14 I1_SR2 SilentIntronRegion 0 69.66 18.30 45.00 21.46 37.66 35.03 49.47 45.33 74.51 40.56 46.19 100.45 117.32 63.39 59.33 106.96 74.81 22.80 21.64 38.09 52.48 55.40 85.09 15 I1_AR3 ActiveIntronRegion 0 51.68 17.16 36.47 24.19 75.21 33.53 75.42 33.51 51.64 32.02 45.00 97.71 151.28 50.26 53.24 72.22 44.82 13.55 18.26 25.97 28.95 41.10 57.97 16 I1_SR3 SilentIntronRegion 0 28.90 7.68 23.14 15.65 52.77 28.69 49.76 25.74 29.64 17.78 20.25 38.38 35.07 31.32 38.93 37.15 23.85 5.93 11.85 15.05 12.51 28.82 30.50 17 I1_AR4 ActiveIntronRegion 1 52.31 4.07 51.12 55.68 74.54 33.27 64.12 76.30 97.57 56.20 38.93 84.73 85.76 25.06 70.87 64.11 41.97 8.97 11.38 33.74 6.61 72.03 50.76 18 I1_SR4 SilentIntronRegion 0 63.29 15.39 64.64 47.72 85.60 41.62 61.20 86.71 103.97 53.20 44.31 113.32 135.82 45.95 75.84 82.43 57.04 12.64 18.98 42.18 13.28 103.40 52.98 19 I1_AR5 ActiveIntronRegion 0 42.63 13.71 39.59 26.10 62.76 32.71 54.59 45.80 55.21 37.28 37.34 64.62 69.63 45.30 41.87 56.11 44.73 11.72 10.57 25.12 22.40 43.74 51.03 20 E2_Aa NovelBoundary 0 55.27 9.08 54.29 30.93 74.19 50.03 49.95 44.77 59.84 33.07 39.22 68.27 32.79 44.26 29.30 67.08 16.64 7.21 0.00 17.90 26.38 33.13 38.67 21 ER2a ExonRegion 0 108.39 70.51 106.14 60.60 150.22 140.96 160.80 154.09 183.37 187.82 338.31 358.15 167.64 443.48 183.73 216.35 259.46 65.33 87.59 85.45 252.58 165.41 171.85 22 E2a_E3a KnownJunction 0 91.94 65.32 115.87 61.60 147.62 112.66 110.27 152.88 207.35 223.71 409.05 296.05 267.35 384.07 187.03 220.20 269.94 84.11 74.45 66.86 254.65 151.25 159.63 23 E2a_E4a KnownJunction 0 3.78 3.16 3.64 1.83 29.80 2.84 5.74 10.84 11.05 5.24 4.69 13.65 6.82 7.06 9.64 8.72 4.77 0.00 3.67 0.00 20.08 5.69 12.80 24 ER3a ExonRegion 0 94.08 91.65 147.61 85.67 204.96 146.46 197.49 201.10 258.82 239.18 434.97 587.52 250.48 588.00 270.81 356.08 356.06 87.05 105.59 108.65 249.15 261.06 212.35 25 E3a_E4a KnownJunction 0 133.73 118.86 178.91 125.69 499.66 276.43 335.50 232.03 293.23 273.78 503.23 505.36 199.01 626.29 315.72 429.46 389.25 111.47 139.77 131.29 272.44 315.66 318.40 26 ER4a ExonRegion 0 139.57 86.66 171.95 113.49 486.27 296.51 303.90 230.95 296.50 288.80 505.12 509.21 248.84 608.39 265.52 368.09 383.03 124.12 161.17 111.17 264.19 307.92 270.34 27 E4a_E5a KnownJunction 0 155.06 118.27 159.25 120.63 364.18 233.56 302.69 234.37 301.85 260.70 509.29 561.93 381.79 564.60 349.34 474.06 391.68 150.19 137.89 107.06 238.03 369.18 338.55 28 ER4b ExonRegion 0 139.37 102.19 170.51 125.04 349.59 235.00 264.40 247.69 326.81 292.35 484.67 567.16 334.16 552.69 309.42 403.76 367.06 169.35 136.65 105.85 239.32 319.61 277.37 29 ER5a ExonRegion 0 117.35 122.64 212.16 161.99 313.21 220.41 299.99 267.77 344.12 307.69 570.15 777.62 385.10 599.30 353.71 598.06 405.00 175.59 177.85 127.30 254.71 448.77 335.43 30 E5_Da KnownBoundary 0 48.53 60.78 78.68 75.75 111.55 81.49 149.14 119.57 144.85 112.47 235.32 228.22 124.50 120.73 72.32 242.42 141.00 79.38 93.84 53.18 94.70 192.70 132.65 31 E5a_E5b KnownJunction 1 91.05 92.09 177.91 129.82 164.86 139.75 287.63 192.14 227.80 225.61 340.82 78.48 30.03 56.15 106.81 395.20 286.86 106.00 158.97 110.19 172.17 372.24 193.77 32 E5_Ab KnownBoundary 0 43.86 38.81 161.67 83.07 125.38 68.94 105.73 119.44 149.82 146.08 171.04 200.62 68.18 150.75 111.50 137.91 171.76 40.79 92.14 40.40 97.48 165.94 125.31 33 ER5b ExonRegion 0 112.88 128.79 286.74 197.62 294.33 230.45 324.37 286.35 381.24 329.16 585.02 809.61 322.05 655.06 402.31 577.58 452.22 150.90 207.05 139.72 289.42 497.96 331.84 34 ER5c ExonRegion 0 180.70 136.64 258.20 175.67 368.28 273.03 360.04 317.66 380.54 343.03 606.73 644.12 313.94 577.03 352.04 476.37 440.46 128.53 193.77 138.13 320.47 404.25 321.06 35 E5_Db KnownBoundary 0 397.40 213.71 268.26 207.10 824.62 456.61 650.69 383.39 406.45 358.28 721.45 734.79 448.83 570.43 524.01 659.40 476.02 121.13 292.53 146.43 357.88 420.12 400.87 36 ER5d ExonRegion 0 173.30 117.77 233.58 113.41 293.54 188.59 238.87 256.90 258.25 253.68 317.05 356.03 216.40 375.63 348.70 257.98 217.75 59.75 97.30 95.35 155.23 286.25 187.28 37 E5_Dc KnownBoundary 1 49.71 61.11 79.45 39.06 119.02 75.13 94.07 120.02 101.68 106.32 47.01 191.61 81.16 58.10 99.76 26.49 41.05 2.11 3.95 28.12 4.82 137.71 23.13 38 ER5e ExonRegion 1 45.02 13.49 32.61 31.65 106.21 44.43 55.11 54.71 53.94 46.26 13.71 82.70 52.01 39.82 32.75 8.61 16.02 2.67 2.07 8.68 0.75 45.45 18.38 39 ER5f ExonRegion 0 5.64 0.00 0.00 0.00 0.45 1.83 0.88 1.73 0.62 1.15 0.97 0.00 0.78 0.54 3.38 0.00 0.00 0.00 0.00 2.13 0.00 0.00 1.96 40 I5_AR1 ActiveIntronRegion 0 25.85 7.74 9.41 13.83 50.64 28.55 28.69 33.84 40.56 31.05 3.45 12.69 12.45 19.70 19.42 10.68 13.53 8.60 6.96 8.60 3.30 10.62 15.04 41 I5_AR2 ActiveIntronRegion 0 37.60 1.44 8.15 3.21 68.15 24.38 29.59 33.65 36.40 29.41 0.45 4.84 4.69 32.48 13.99 14.69 11.07 0.87 3.19 1.75 4.41 9.19 9.85 42 ER6a ExonRegion 0 0.53 0.25 0.77 0.34 3.01 0.00 1.16 0.00 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00