Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DEM1 Gene 0 29.46 18.32 30.00 15.01 38.27 31.79 38.98 36.71 24.74 34.96 31.08 11.97 10.98 22.78 25.08 25.39 36.75 32.44 12.61 21.30 18.24 19.28 20.97 2 358527 Transcript 0 0.15 0.00 0.00 0.00 0.00 0.00 1.10 0.00 0.59 1.37 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 372703 Transcript 0 8.87 5.21 7.76 7.86 18.45 11.77 15.65 9.00 11.05 14.01 10.00 4.24 3.72 6.40 3.81 8.32 17.44 17.05 3.89 9.95 8.08 5.58 7.32 4 420209 Transcript 0 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 4.51 2.32 0.00 0.00 4.94 10.75 0.00 8.98 0.00 0.00 0.00 6.30 0.00 0.00 5 296380 Transcript 0 11.27 11.58 11.10 3.79 14.86 7.02 13.98 9.02 7.70 12.20 4.94 7.80 7.54 5.36 8.99 9.96 7.93 7.76 5.79 13.22 5.63 6.67 9.03 6 432259 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 2.53 0.00 0.00 7 418186 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.18 8 415550 Transcript 0 0.00 0.00 3.02 0.00 0.00 0.00 1.90 0.00 0.00 2.61 12.00 0.00 0.00 2.47 0.00 0.00 8.88 1.58 0.00 0.00 2.41 0.00 3.93 9 443729 Transcript 0 0.00 0.00 3.13 0.00 0.00 0.00 0.00 7.97 2.60 3.06 12.27 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 2.97 0.00 0.00 10 419161 Transcript 0 3.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 471429 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1a ExonRegion 0 0.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Af KnownBoundary 0 10.96 0.00 1.63 1.40 3.74 18.68 1.63 4.64 1.45 0.00 7.58 0.00 0.00 2.88 0.00 12.13 9.07 1.82 0.00 0.00 2.84 0.00 0.00 14 ER1b ExonRegion 0 3.02 0.00 0.00 0.00 0.00 2.88 0.00 0.00 0.00 0.00 2.76 0.00 0.00 0.00 1.24 2.55 2.83 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1c ExonRegion 0 4.23 0.00 0.00 0.00 0.00 3.67 0.00 0.00 0.00 0.00 3.87 0.00 0.00 0.00 2.90 2.97 3.30 0.00 0.00 0.00 0.00 0.00 0.00 16 E1_Ag KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 4.33 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 17 ER1d ExonRegion 0 4.23 0.00 0.00 0.00 0.00 3.67 1.99 0.00 0.00 0.00 3.87 0.00 0.00 0.00 2.90 2.97 3.30 0.00 0.00 0.00 0.00 0.00 0.00 18 E1_Ah KnownBoundary 0 0.00 0.00 0.00 0.00 8.66 8.52 4.46 0.00 0.00 0.00 5.37 0.00 0.00 0.00 6.30 4.36 0.00 0.00 0.00 0.00 3.15 3.06 4.35 19 ER1e ExonRegion 0 4.23 0.51 0.15 0.00 1.00 7.11 3.48 0.22 0.46 0.72 6.52 0.00 0.00 3.05 6.17 3.34 4.13 1.15 0.00 0.53 0.83 1.04 1.84 20 E1_Ai KnownBoundary 0 21.56 9.41 15.26 6.63 16.72 62.69 28.88 16.92 11.72 19.99 20.37 0.00 0.00 2.94 0.00 29.14 13.09 57.25 4.42 11.89 6.24 9.12 12.29 21 ER1f ExonRegion 0 14.67 10.71 4.17 0.82 15.52 49.63 21.18 6.57 5.27 10.02 26.29 0.00 0.00 20.14 11.02 12.28 20.69 27.22 0.21 6.10 13.81 9.86 24.28 22 ER1g ExonRegion 0 20.90 14.24 5.67 2.73 24.08 69.68 30.45 8.64 7.41 13.62 34.55 0.00 0.00 24.36 8.70 26.75 26.41 35.34 3.19 10.64 17.63 14.58 26.43 23 ER1h ExonRegion 0 20.37 14.24 6.13 2.73 24.08 74.96 31.94 8.64 8.34 15.34 37.69 0.00 0.00 24.36 8.70 32.69 23.52 42.50 3.19 12.77 17.63 15.37 27.90 24 ER1i ExonRegion 0 10.52 7.16 4.35 2.80 18.96 37.09 17.06 10.27 9.03 17.43 18.62 0.37 1.52 5.99 4.78 21.56 12.23 40.52 1.53 7.88 9.44 7.51 11.13 25 E1_Da KnownBoundary 0 0.00 3.03 0.00 0.00 4.33 0.00 6.14 5.09 0.00 5.43 2.32 6.15 6.82 4.94 0.00 0.00 8.32 14.38 0.00 2.36 8.71 3.00 3.67 26 E1a_E1k KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 1.19 2.74 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E1a_E1l KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.18 29 E1_Db KnownBoundary 0 0.00 0.00 0.00 4.03 0.00 0.00 2.25 0.00 0.00 2.15 2.37 6.30 0.00 2.35 0.00 0.00 9.44 5.14 0.00 0.00 2.97 0.00 0.00 30 E1b_E1k KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 2.53 0.00 0.00 31 E1b_E2a KnownJunction 0 3.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E1_Dc KnownBoundary 0 3.78 0.00 1.12 0.00 4.16 7.78 2.03 4.68 2.69 1.02 2.68 0.00 0.00 0.00 0.00 0.00 12.81 0.00 0.00 0.00 5.44 0.00 3.67 33 E1c_E1k KnownJunction 0 0.00 0.00 3.02 0.00 0.00 0.00 1.90 0.00 0.00 2.61 12.00 0.00 0.00 2.47 0.00 0.00 8.88 1.58 0.00 0.00 2.41 0.00 3.93 34 E1c_E1l KnownJunction 0 0.00 0.00 3.13 0.00 0.00 0.00 0.00 7.97 2.60 3.06 12.27 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 2.97 0.00 0.00 35 E1c_E2a KnownJunction 0 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 4.51 2.32 0.00 0.00 4.94 10.75 0.00 8.98 0.00 0.00 0.00 6.30 0.00 0.00 36 ER1j ExonRegion 1 4.41 2.03 2.65 2.73 7.14 4.43 6.18 10.23 0.93 9.27 12.24 7.22 4.69 9.34 5.80 0.00 21.46 15.86 0.00 2.48 14.51 2.60 0.00 37 ER1k ExonRegion 1 2.12 0.64 5.68 3.23 6.34 3.67 4.32 13.01 1.76 9.90 21.26 4.56 1.73 8.98 5.80 0.00 32.31 14.20 0.00 0.00 15.31 0.66 4.95 38 ER1l ExonRegion 0 2.54 1.41 1.48 2.03 5.81 2.62 2.06 3.55 5.62 3.52 7.05 0.12 2.07 5.17 1.97 8.97 10.39 17.67 0.92 6.54 7.00 1.48 6.57 39 E1_Aj KnownBoundary 0 3.26 9.08 0.00 3.60 11.21 17.15 5.39 2.55 10.33 6.31 12.32 0.00 6.17 7.00 4.45 12.48 11.78 13.56 0.00 2.94 5.44 3.12 0.00 40 ER1m ExonRegion 0 7.91 7.76 6.84 6.01 10.36 11.61 12.30 11.34 9.17 19.43 9.80 2.48 4.99 11.27 6.10 7.78 14.75 17.18 6.15 12.18 11.78 3.50 5.45 41 E1_Dd KnownBoundary 0 3.48 0.00 8.13 3.30 22.67 13.40 14.57 18.57 10.27 31.86 7.48 6.30 6.82 2.47 0.00 7.60 12.72 19.11 0.00 20.26 9.14 5.14 4.35 42 E1d_E1k NovelJunction 0 0.00 0.00 0.00 0.00 7.72 0.00 5.65 2.55 0.00 0.00 2.37 0.00 8.28 0.00 0.00 0.00 3.74 4.27 0.00 2.62 0.00 7.78 0.00 43 E1d_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER1n ExonRegion 0 11.56 6.68 7.58 9.98 21.06 11.45 19.29 13.90 14.19 22.18 10.42 6.07 3.17 6.27 3.64 5.77 22.88 14.49 9.06 12.29 5.88 4.06 5.27 45 E1_Ak KnownBoundary 0 9.78 14.93 13.93 12.49 21.14 4.66 31.00 10.06 14.09 20.09 2.21 0.00 6.82 7.77 5.07 11.19 25.06 4.48 4.80 17.32 9.20 6.06 3.24 46 ER1o ExonRegion 0 20.50 14.56 21.56 15.59 25.30 23.31 40.23 31.96 25.47 31.30 25.53 6.27 12.35 20.90 19.44 18.07 38.53 28.51 6.99 18.32 12.83 18.34 19.16 47 E1_De KnownBoundary 0 24.15 5.79 11.80 6.33 19.19 31.00 19.87 17.00 20.46 22.97 16.06 0.00 0.00 7.30 4.45 12.22 16.27 13.97 0.00 6.20 14.58 8.27 8.28 48 E1e_E1l KnownJunction 0 10.15 2.70 18.54 11.62 19.44 13.74 24.11 25.30 6.05 15.93 25.69 0.00 14.28 16.89 20.27 7.18 12.34 17.04 4.24 11.70 12.29 10.10 3.67 49 ER1p ExonRegion 0 12.52 7.53 14.23 11.57 28.47 21.22 25.60 9.54 13.33 16.31 12.51 6.53 5.91 7.76 5.83 10.24 19.04 18.99 1.68 11.01 11.37 11.19 10.12 50 E1_Al KnownBoundary 0 20.23 19.14 11.95 5.96 37.01 25.44 26.72 7.31 11.95 20.87 17.16 0.00 0.00 2.41 5.69 8.12 8.79 11.65 0.00 0.00 2.84 11.76 8.62 51 ER1q ExonRegion 0 27.77 17.20 31.24 12.15 35.35 46.75 42.60 29.51 18.61 30.54 54.83 10.79 12.42 27.41 19.44 24.30 25.31 35.59 9.95 20.42 20.45 23.87 14.12 52 E1_Df NovelBoundary 0 3.78 0.00 16.56 4.20 20.20 7.95 10.64 6.82 5.38 8.33 2.68 12.00 0.00 2.47 0.00 4.02 3.65 0.00 0.00 2.68 3.09 0.00 8.54 53 E1f_E2a KnownJunction 0 44.75 17.30 28.15 11.22 39.73 29.19 29.63 16.72 16.81 31.21 50.80 6.30 19.48 26.72 29.54 35.97 35.16 35.40 3.76 23.27 18.59 8.45 20.57 54 E2_Aa NovelBoundary 0 3.63 11.84 4.20 4.13 4.33 0.00 10.51 2.42 1.68 10.40 4.21 0.00 0.00 0.00 0.00 0.00 13.65 0.00 0.00 6.01 2.78 0.00 11.44 55 ER2a ExonRegion 0 20.25 9.76 37.24 22.96 19.37 16.98 26.21 54.22 25.89 42.92 56.57 21.45 17.43 35.18 32.55 31.28 52.12 49.86 11.19 25.47 29.25 19.42 28.56 56 E2_Da KnownBoundary 0 41.49 3.09 22.86 13.25 15.87 28.05 57.28 51.47 29.77 32.13 34.43 25.96 0.00 38.08 26.33 16.41 43.57 32.42 9.60 9.78 23.48 8.45 24.33 57 ER2b ExonRegion 0 48.62 28.52 45.07 23.56 64.87 70.85 69.54 62.12 44.00 61.48 67.21 22.93 23.60 45.53 38.21 54.07 58.16 57.72 20.38 22.79 31.03 33.81 33.45 58 E2_Db KnownBoundary 0 41.71 47.95 44.62 17.78 18.68 26.12 47.74 56.02 21.67 54.66 30.85 6.30 26.30 21.01 50.31 42.72 25.25 48.87 20.89 15.79 11.86 25.84 23.30 59 ER2c ExonRegion 0 39.24 19.14 42.32 22.90 34.02 46.28 67.20 49.38 32.80 48.96 34.53 15.00 15.99 39.95 42.08 46.98 37.62 56.76 25.66 27.72 19.40 30.25 29.16 60 E2_Dc KnownBoundary 0 48.90 27.50 45.89 32.56 68.93 37.59 79.67 65.64 42.45 48.46 49.70 7.20 6.66 33.08 51.55 37.77 56.76 53.68 16.28 34.90 30.70 20.21 23.47 61 ER2d ExonRegion 0 47.21 28.50 50.58 25.09 74.68 57.36 70.24 62.90 41.64 53.93 72.25 17.04 20.97 39.49 46.80 39.28 74.42 68.31 30.94 38.29 33.04 31.19 37.34 62 E2_Dd KnownBoundary 0 27.26 33.22 35.39 12.79 65.70 32.37 62.09 52.29 33.45 31.16 44.17 24.76 6.01 21.43 21.51 25.12 56.29 32.62 28.71 22.24 21.19 23.94 49.77 63 E2_De KnownBoundary 0 41.64 32.82 40.27 14.62 95.16 84.10 102.63 43.87 25.23 27.45 46.27 13.50 18.83 14.66 15.95 35.97 54.42 34.82 17.13 18.15 47.32 33.07 17.16 64 ER2e ExonRegion 0 55.73 51.18 68.62 24.99 138.25 104.83 121.14 95.06 54.96 57.73 86.98 31.03 18.76 52.78 40.62 55.98 102.88 72.37 36.63 31.91 60.97 52.09 60.20 65 ER2f ExonRegion 0 67.13 34.60 67.85 27.11 103.69 68.31 82.50 72.00 52.72 56.16 63.42 22.86 22.35 40.63 40.07 43.65 90.98 57.37 31.60 32.85 47.10 47.60 40.06 66 E2_Df KnownBoundary 0 54.31 16.77 61.03 34.93 55.35 74.67 45.58 61.32 47.13 60.25 60.59 37.36 21.75 38.79 49.69 62.97 81.72 54.72 22.49 29.72 36.63 19.53 40.04 67 ER2g ExonRegion 0 45.27 23.41 46.14 21.29 54.66 40.84 48.24 58.29 34.22 46.85 39.53 13.28 6.49 28.38 38.01 28.68 51.49 32.11 12.85 23.59 21.47 26.62 26.09 68 E2_Dg KnownBoundary 0 3.33 0.00 14.10 0.00 3.23 2.78 9.27 2.05 1.16 2.36 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 3.41 69 E2_Dh KnownBoundary 0 3.78 2.89 2.37 0.00 0.00 2.56 0.00 7.15 0.00 3.89 0.00 0.00 6.49 0.00 0.00 0.00 0.00 3.73 0.00 0.00 0.00 3.00 0.00 70 ER2h ExonRegion 0 21.17 14.24 19.61 0.00 5.35 12.84 18.54 8.64 3.71 9.18 0.00 4.33 4.69 0.00 5.80 8.92 3.30 5.54 0.00 4.26 2.20 4.17 5.87 71 ER2i ExonRegion 0 22.54 23.16 22.21 7.58 29.72 14.03 27.97 18.03 15.41 24.41 7.78 15.60 15.07 10.71 17.98 19.93 15.86 15.53 11.58 26.44 11.26 13.34 18.06