Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C1orf149	Gene	0	67.24	92.00	38.11	38.28	100.91	163.38	87.63	92.87	80.70	84.50	88.84	22.32	43.33	73.09	60.39	67.99	85.04	37.28	34.85	32.78	68.28	56.42	43.91
2	296214	Transcript	0	7.06	3.22	1.12	0.45	5.35	11.77	2.32	1.73	0.41	0.29	1.77	0.00	0.00	0.95	0.00	3.96	0.28	1.39	0.53	1.77	2.39	0.00	2.69
3	373073	Transcript	0	19.48	6.25	1.27	1.56	11.71	4.77	10.73	2.51	3.82	2.87	14.27	7.65	20.45	7.42	31.15	39.65	4.21	0.00	0.00	0.00	5.19	21.68	7.85
4	373075	Transcript	0	21.44	60.50	22.88	32.21	71.22	88.89	44.16	75.77	64.31	71.57	20.60	13.56	18.01	16.71	19.65	13.18	14.54	11.65	11.79	21.75	11.34	17.09	10.08
5	475828	Transcript	0	46.45	5.79	1.83	5.56	12.31	2.73	6.76	1.89	9.20	7.01	50.43	6.30	21.91	19.01	23.73	23.75	43.95	0.00	12.80	3.00	11.18	40.72	23.13
6	448519	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	487788	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	487792	Transcript	0	0.39	0.74	0.00	0.00	0.49	0.33	0.48	0.00	0.01	1.39	0.70	0.00	0.00	0.24	0.00	0.00	0.00	0.00	0.00	0.01	2.16	0.00	0.53
9	373074	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	373071	Transcript	0	0.35	0.00	0.00	0.00	0.00	0.31	0.22	0.00	0.21	0.00	0.64	2.16	2.35	1.62	1.45	0.50	0.00	0.00	0.00	0.00	0.00	2.43	0.49
11	485039	Transcript	1	10.40	11.46	5.57	9.96	18.81	21.81	19.85	15.24	18.25	16.38	26.32	21.60	31.30	33.25	11.61	29.53	33.39	4.33	3.59	11.61	14.93	16.53	15.60
12	IG39_AR5	ActiveIntergenicRegion	0	2.47	5.88	8.83	13.11	29.19	25.66	17.62	16.64	9.88	20.64	3.65	18.63	17.43	10.28	9.46	7.87	6.51	4.65	5.67	5.68	3.89	13.54	12.68
13	IG39_AR4	ActiveIntergenicRegion	0	14.00	13.98	21.83	22.58	33.51	31.82	21.96	18.16	11.99	37.25	5.17	18.38	16.60	18.09	23.52	11.84	17.32	5.74	7.60	6.28	12.68	10.39	5.11
14	IG39_AR3	ActiveIntergenicRegion	0	10.40	15.21	13.16	14.46	26.76	22.32	9.50	9.99	6.77	29.47	8.07	4.89	3.87	11.02	11.10	1.68	7.18	2.41	13.02	3.89	9.87	7.79	8.68
15	IG39_SR2	SilentIntergenicRegion	0	10.15	8.81	9.47	16.37	22.07	16.04	16.07	10.77	7.19	19.86	5.01	5.95	5.05	7.59	9.60	8.93	6.97	2.77	9.00	3.78	3.87	14.01	11.86
16	IG39_AR2	ActiveIntergenicRegion	0	31.29	17.13	16.54	23.40	61.14	35.75	30.15	32.50	21.75	36.60	8.36	12.49	10.06	9.74	22.14	14.07	13.87	5.33	3.12	6.77	11.33	23.12	17.01
17	ER1a	ExonRegion	0	7.06	3.22	1.12	0.45	5.35	11.77	2.32	1.73	0.41	0.29	1.77	0.00	0.00	0.95	0.00	3.96	0.28	1.39	0.53	1.77	2.39	0.00	2.69
18	E1_Ae	KnownBoundary	1	695.83	431.63	91.84	95.33	1002.12	1665.92	728.86	209.64	205.93	195.80	473.70	11.40	0.00	377.48	492.99	619.24	515.38	240.18	264.10	222.24	537.77	254.61	416.66
19	ER1b	ExonRegion	0	36.59	25.56	12.60	2.92	41.67	144.35	46.72	20.25	21.00	12.94	25.68	0.00	0.00	17.87	14.51	42.46	36.31	13.46	18.66	24.01	27.70	17.26	25.59
20	ER1c	ExonRegion	1	94.19	54.91	22.06	14.31	112.38	340.17	125.78	48.40	49.40	33.26	78.28	0.00	0.00	49.54	59.48	95.11	85.82	29.56	28.67	60.64	74.93	33.34	61.67
21	ER1d	ExonRegion	1	306.03	211.40	54.08	59.60	460.11	880.81	377.69	124.29	114.30	121.73	258.57	0.00	0.85	210.03	264.94	346.25	289.13	109.86	136.97	130.75	313.63	155.13	218.38
22	ER1e	ExonRegion	1	284.10	205.55	70.77	75.80	345.25	623.24	297.40	167.53	170.26	188.18	229.96	6.46	17.82	175.53	168.81	287.52	267.17	135.77	135.79	105.04	270.55	151.36	208.37
23	E1a_E2b	KnownJunction	0	49.64	21.31	25.93	18.28	8.49	34.36	26.98	63.09	61.17	47.44	36.69	34.36	27.27	26.96	44.26	30.59	26.93	28.89	25.69	0.00	57.14	20.33	24.07
24	ER1f	ExonRegion	0	47.41	28.06	32.84	20.72	23.81	32.09	29.66	67.24	81.64	73.52	40.01	21.65	26.73	22.09	35.98	30.91	39.61	36.40	29.94	8.30	55.31	23.96	25.55
25	ER1g	ExonRegion	0	0.77	1.48	0.00	0.01	0.97	0.67	0.96	0.00	0.03	0.26	1.41	0.00	0.00	0.49	0.00	0.00	0.00	0.00	0.00	0.02	1.16	0.00	1.07
26	E1b_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.15	0.00	0.00
27	ER2a	ExonRegion	0	1.83	0.67	0.55	1.49	2.00	2.23	2.62	1.54	1.76	2.30	0.78	2.12	1.86	2.75	0.74	3.78	3.28	0.89	0.04	0.51	1.00	1.63	1.46
28	E2_Ab	KnownBoundary	0	0.00	3.29	0.00	3.80	3.90	7.78	4.02	0.00	1.39	1.50	2.68	0.00	13.31	2.47	4.45	0.00	0.00	2.53	0.00	6.07	0.00	0.00	0.00
29	E2_Ac	KnownBoundary	0	49.19	23.42	24.10	21.48	36.25	44.69	21.64	60.54	70.31	58.69	68.33	6.30	32.63	43.50	29.79	46.23	73.40	31.71	39.15	14.00	76.17	21.13	22.79
30	ER2b	ExonRegion	0	51.50	27.34	25.73	26.12	29.43	47.37	28.61	71.35	81.86	74.49	73.66	23.09	41.43	45.66	51.90	46.07	71.15	35.52	38.93	12.65	87.66	24.08	28.39
31	ER2c	ExonRegion	1	75.37	53.10	115.00	87.69	73.51	155.23	56.11	252.03	232.63	254.29	443.03	38.12	50.57	199.68	202.64	230.69	408.39	102.90	149.81	124.57	368.75	160.77	139.11
32	E2a_E3a	KnownJunction	1	160.55	107.81	170.93	170.01	163.41	256.67	132.22	382.77	324.65	313.75	255.12	29.86	49.51	424.10	531.68	626.16	187.94	210.09	271.82	157.30	200.65	364.40	388.06
33	ER3a	ExonRegion	0	106.91	125.57	138.65	132.82	358.15	513.90	192.34	353.41	284.90	271.92	286.33	73.01	168.52	255.08	259.66	366.18	251.06	126.78	132.41	132.25	221.70	195.07	226.79
34	E3a_E4a	KnownJunction	0	61.71	126.03	119.22	102.48	868.85	1477.96	465.21	327.32	272.48	277.38	334.40	134.29	343.00	178.47	237.72	191.66	336.79	100.73	105.51	137.04	269.66	167.60	118.31
35	ER4a	ExonRegion	0	90.64	175.95	119.47	110.96	617.57	1162.95	508.37	335.70	305.45	310.41	401.08	104.47	276.51	284.68	326.20	218.00	376.37	105.88	115.85	108.23	328.78	198.21	156.60
36	E4_Da	NovelBoundary	0	24.52	6.71	16.71	12.25	4.33	0.00	2.08	15.57	11.20	7.09	0.00	0.00	6.98	0.00	0.00	3.25	0.00	5.14	0.00	3.26	0.00	0.00	7.77
37	E4a_E5a	KnownJunction	1	154.18	325.14	144.26	130.39	566.21	1033.21	589.09	362.60	304.86	324.20	483.44	55.07	238.62	420.51	393.23	299.49	402.06	123.78	164.71	117.86	420.02	247.87	209.57
38	ER5a	ExonRegion	0	257.79	266.41	163.66	154.61	272.30	442.28	225.20	389.23	335.84	357.23	479.09	88.14	185.63	406.98	321.00	332.19	471.22	205.01	162.85	130.16	363.19	306.46	203.51
39	E5_Da	KnownBoundary	0	63.57	18.68	6.03	12.89	23.94	28.28	13.07	13.76	23.58	22.59	26.11	24.61	40.74	29.14	31.77	69.90	47.69	18.99	17.32	5.75	40.65	24.06	30.56
40	E5a_E6a	KnownJunction	0	57.57	422.82	139.44	133.18	241.94	432.54	274.60	308.75	261.51	274.96	5.37	6.15	6.82	0.00	0.00	0.00	0.00	55.63	162.08	169.76	0.00	0.00	0.00
41	E5a_E7a	KnownJunction	0	46.45	5.79	1.83	5.56	12.31	2.73	6.76	1.89	9.20	7.01	50.43	6.30	21.91	19.01	23.73	23.75	43.95	0.00	12.80	3.00	11.18	40.72	23.13
42	E5a_E8a	KnownJunction	0	354.21	42.69	43.43	26.57	114.09	34.24	56.70	26.53	28.76	22.40	425.69	126.04	286.67	418.92	316.71	302.06	474.43	9.53	13.93	0.00	342.56	248.61	213.92
43	E5a_E9b	KnownJunction	0	19.48	6.25	1.27	1.56	11.71	4.77	10.73	2.51	3.82	2.87	14.27	7.65	20.45	7.42	31.15	39.65	4.21	0.00	0.00	0.00	5.19	21.68	7.85
44	ER5b	ExonRegion	0	10.40	11.46	5.57	9.96	18.81	21.81	19.85	15.24	18.25	16.38	26.32	21.60	31.30	33.25	11.61	29.53	33.39	4.33	3.59	11.61	14.93	16.53	15.60
45	E5_Db	NovelBoundary	1	0.00	11.45	3.34	6.33	43.63	7.84	16.03	15.20	29.02	18.05	17.37	60.47	48.86	16.60	5.19	12.05	17.58	4.48	4.80	11.51	2.84	23.51	7.85
46	I5	Intron	0	11.22	6.43	4.59	8.16	17.30	17.95	17.10	12.40	16.97	18.50	23.11	25.32	34.80	25.02	10.84	24.76	21.77	6.42	5.47	8.72	7.21	16.45	12.47
47	I5_SR1	SilentIntronRegion	0	7.01	6.30	3.34	6.85	11.21	16.51	21.99	9.04	17.75	17.63	26.20	32.20	30.22	24.30	9.77	28.01	25.52	9.49	3.93	11.77	10.33	8.18	14.19
48	I5_AR1	ActiveIntronRegion	0	7.18	3.82	3.23	7.83	11.96	18.14	15.87	7.35	13.69	17.57	25.79	11.64	18.94	21.84	7.34	21.71	21.74	7.79	3.66	8.40	7.54	14.78	14.68
49	I5_SR2	SilentIntronRegion	0	10.44	6.04	4.26	7.51	15.94	16.12	14.54	12.23	16.82	17.04	20.98	24.87	37.48	26.01	11.48	24.52	21.35	5.83	6.41	7.99	6.69	16.09	12.00
50	I5_AR2	ActiveIntronRegion	0	28.92	12.82	10.63	14.63	43.54	30.59	25.36	26.76	21.60	29.82	26.14	37.20	51.56	25.54	14.40	25.34	18.05	2.56	5.56	8.27	4.46	35.11	8.95
51	E6a_E7a	KnownJunction	0	10.96	93.54	14.52	22.21	42.61	35.15	54.45	54.87	35.18	50.69	2.58	0.00	0.00	2.47	0.00	0.00	0.00	20.31	39.81	15.21	0.00	0.00	0.00
52	E6a_E8a	KnownJunction	0	72.16	522.93	93.88	84.30	294.65	636.39	266.21	216.17	216.23	217.15	2.68	5.70	0.00	0.00	0.00	7.52	7.76	110.80	66.54	95.81	0.00	0.00	0.00
53	ER6a	ExonRegion	0	73.58	509.68	159.79	154.87	259.82	552.40	293.96	371.85	328.38	350.11	5.93	8.95	2.03	0.70	11.41	2.58	2.31	118.38	131.87	145.32	0.00	0.00	0.00
54	I6	Intron	1	15.87	9.15	0.91	9.14	25.42	17.42	11.25	3.86	7.36	5.98	7.73	27.25	46.21	12.42	8.96	17.83	4.95	0.92	0.00	4.26	0.00	8.33	4.40
55	I6_AR1	ActiveIntronRegion	0	16.19	9.33	0.93	9.31	25.87	17.75	11.48	3.94	7.51	6.10	7.89	27.75	47.04	12.67	9.14	18.19	5.05	0.94	0.00	4.34	0.00	8.50	4.49
56	E7_Aa	NovelBoundary	1	40.60	32.43	0.00	15.95	40.07	16.87	40.41	14.95	17.39	34.06	40.96	36.31	83.27	38.14	19.78	18.71	40.67	1.70	8.00	5.88	5.31	17.15	15.02
57	ER7a	ExonRegion	0	42.66	93.54	21.49	27.26	60.31	49.65	64.16	64.35	55.39	70.40	53.08	19.98	30.30	35.98	43.30	26.98	60.18	20.47	39.20	18.82	15.26	41.83	21.91
58	ER7b	ExonRegion	1	60.30	142.08	32.24	24.32	107.33	53.10	97.06	57.92	62.36	65.60	48.02	41.37	45.34	48.43	45.32	29.06	83.84	21.97	31.22	21.65	20.47	37.83	27.60
59	E7_Db	NovelBoundary	1	41.41	30.52	2.25	12.02	32.09	15.05	18.90	15.61	26.30	15.26	5.11	69.32	105.67	30.61	17.80	11.11	4.39	0.00	0.00	5.56	0.00	11.82	11.10
60	E7b_E8a	KnownJunction	0	114.61	180.36	37.25	14.55	130.56	72.00	151.12	46.58	51.59	43.41	45.91	12.60	6.82	33.79	26.70	26.40	73.77	12.31	13.46	17.26	19.34	25.04	44.64
61	I7	Intron	1	50.17	32.54	7.50	15.81	51.52	20.56	30.36	25.35	27.72	26.03	19.52	38.18	76.61	18.94	18.94	19.33	12.43	3.86	5.45	10.20	4.71	24.42	6.03
62	I7_AR1	ActiveIntronRegion	0	50.34	32.65	7.53	15.86	51.69	20.63	30.46	25.43	27.81	26.11	19.58	38.31	76.86	19.01	19.00	19.39	12.47	3.88	5.47	10.23	4.73	24.50	6.05
63	E8_Aa	NovelBoundary	1	122.61	53.21	4.23	15.18	84.38	38.90	55.47	31.42	10.65	22.03	37.54	25.51	80.19	35.61	33.25	37.26	31.88	0.00	4.80	2.56	19.40	17.88	15.79
64	ER8a	ExonRegion	0	375.18	618.51	204.60	176.65	651.86	935.51	578.92	452.09	392.62	395.48	545.08	136.63	312.44	488.57	331.08	327.63	465.72	174.12	109.90	111.83	363.35	323.19	215.58
65	E8_Da	NovelBoundary	0	16.97	34.01	6.95	5.89	47.62	22.83	33.65	15.16	22.60	17.81	2.42	6.30	6.82	9.01	0.00	12.73	4.39	1.95	8.38	11.63	11.49	2.88	3.41
66	E8a_E9a	KnownJunction	0	333.61	552.93	145.38	143.87	826.57	1081.99	716.10	412.59	310.50	326.27	504.23	85.68	244.95	476.72	257.87	293.77	325.48	163.08	123.49	82.64	316.05	326.68	158.52
67	E8a_E9b	NovelJunction	0	3.41	3.16	0.00	0.00	10.27	5.79	2.25	6.74	0.00	1.56	2.37	6.00	0.00	7.59	13.23	7.69	16.18	1.95	12.71	2.94	0.00	11.63	0.00
68	E9_Aa	NovelBoundary	0	37.04	21.31	16.06	15.68	37.27	27.71	35.15	16.84	11.43	9.62	2.63	0.00	0.00	11.71	0.00	0.00	3.83	1.99	0.00	5.82	7.78	3.12	14.77
69	ER9a	ExonRegion	0	198.58	240.85	151.23	144.91	377.91	562.04	303.90	321.80	286.31	282.09	326.35	63.57	156.52	268.38	175.68	208.56	292.62	152.94	122.75	95.37	230.22	227.10	140.45
70	E9_Da	KnownBoundary	0	88.53	86.10	99.91	118.53	211.71	324.59	188.62	237.08	177.80	178.93	176.31	61.07	52.43	231.50	170.47	157.14	175.50	66.28	104.94	75.23	114.78	208.13	112.76
71	ER9b	ExonRegion	1	163.01	295.77	37.81	38.83	197.80	469.27	320.66	70.18	47.52	55.28	22.99	32.36	70.47	80.80	54.59	53.13	29.79	33.38	36.42	21.12	17.65	57.09	44.93
72	E9_Ab	KnownBoundary	0	534.69	917.99	19.16	20.71	591.43	1181.48	753.33	54.22	21.47	16.90	50.38	12.90	18.51	2.47	21.39	29.56	29.17	20.77	50.17	0.00	7.54	12.92	10.67
73	ER9c	ExonRegion	0	192.24	341.56	1.13	0.00	91.64	328.99	213.31	2.23	3.66	1.61	10.74	1.75	3.70	5.34	11.27	11.66	2.73	3.70	0.00	0.00	2.80	9.06	2.15
74	E9_Db	KnownBoundary	0	153.29	251.86	11.53	6.93	50.17	97.27	66.55	12.65	12.93	10.10	22.32	11.40	17.69	6.00	9.77	8.63	9.16	6.51	4.52	8.82	7.60	8.94	4.35
75	ER9d	ExonRegion	0	76.36	50.91	3.54	0.03	5.06	10.21	8.13	1.91	2.11	0.89	2.88	0.55	1.48	1.56	3.09	1.46	0.19	0.58	0.45	0.00	1.87	4.09	1.45
76	E9_Dc	KnownBoundary	0	68.01	92.29	18.27	8.99	32.68	27.71	10.91	29.57	10.42	9.24	10.37	5.70	13.64	2.24	0.00	3.50	3.74	0.00	0.00	2.43	0.00	2.51	4.18
77	ER9e	ExonRegion	1	45.02	99.13	5.45	8.11	12.83	27.83	23.56	28.59	11.14	18.59	0.00	18.83	13.92	4.85	7.74	3.21	0.16	0.44	3.39	4.63	0.00	4.40	0.00
78	E9_Dd	KnownBoundary	1	62.53	125.57	20.28	11.69	102.12	115.62	89.34	54.96	28.41	56.20	9.84	40.66	32.14	14.42	9.15	22.64	4.39	1.91	4.42	5.94	0.00	49.48	0.00
79	E9_De	KnownBoundary	0	53.05	209.90	13.63	11.09	123.51	35.26	43.59	46.13	30.41	23.88	9.84	6.30	27.27	2.88	6.06	0.00	4.77	0.00	0.00	21.54	0.00	17.51	4.35
80	ER9f	ExonRegion	0	30.16	164.80	10.52	13.91	52.18	50.51	54.34	53.37	27.89	35.70	2.82	8.12	14.66	7.17	5.44	3.96	3.30	1.85	3.19	15.78	0.00	4.17	2.45
81	ER9g	ExonRegion	1	31.83	120.87	21.69	29.79	92.12	103.35	64.26	78.18	49.68	60.60	9.85	22.14	39.21	12.15	14.64	6.39	6.83	4.81	7.88	21.16	1.79	10.76	5.65
82	E9_Df	KnownBoundary	1	20.00	92.42	42.02	53.81	85.06	125.16	54.06	108.76	88.71	102.48	22.11	64.22	60.87	21.60	23.61	7.35	8.23	16.33	19.01	27.04	5.87	29.27	12.63
83	ER9h	ExonRegion	0	21.44	60.50	22.88	32.21	71.22	88.89	44.16	75.77	64.31	71.57	20.60	13.56	18.01	16.71	19.65	13.18	14.54	11.65	11.79	21.75	11.34	17.09	10.08
84	I9	Intron	0	6.95	10.10	7.89	5.79	15.71	28.27	12.41	21.14	16.93	15.65	2.75	1.39	2.12	3.02	2.05	3.98	2.71	2.62	4.26	7.63	2.66	5.22	5.08
85	I9_AR1	ActiveIntronRegion	0	10.48	14.36	12.73	6.90	18.16	26.91	14.94	26.93	19.58	21.95	3.19	1.31	1.42	3.60	2.40	4.36	2.42	2.70	1.46	11.71	4.85	6.69	4.32
86	ER10a	ExonRegion	0	0.35	0.00	0.00	0.00	0.00	0.31	0.22	0.00	0.21	0.00	0.64	2.16	2.35	1.62	1.45	0.50	0.00	0.00	0.00	0.00	0.00	2.43	0.49