Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PEF1	Gene	0	124.77	53.56	101.95	93.07	117.04	133.59	84.60	154.14	109.34	211.79	321.19	84.04	87.31	305.59	345.46	296.29	237.44	98.74	70.83	64.22	182.64	131.17	128.25
2	478502	Transcript	0	6.93	4.35	1.51	0.85	3.66	14.82	21.95	4.35	1.63	3.81	10.67	0.00	0.00	3.94	9.49	5.79	11.27	0.97	16.02	0.00	3.95	14.27	1.96
3	373703	Transcript	0	170.31	68.20	133.07	122.32	180.85	168.64	105.11	222.29	150.50	283.58	455.09	118.06	103.33	369.32	509.77	394.86	303.48	122.63	96.61	73.11	225.26	182.46	167.02
4	440872	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	492061	Transcript	0	0.00	0.00	0.00	0.00	1.17	1.03	1.23	1.51	0.69	0.81	1.48	0.00	2.36	2.01	1.37	0.03	0.89	1.65	0.90	1.56	2.26	0.58	2.62
6	472443	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.12	0.00
7	489164	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	496805	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00	0.00	0.00
9	471219	Transcript	0	4.32	0.00	0.00	0.68	0.00	0.00	0.11	0.00	0.57	0.57	1.45	0.00	2.35	0.95	0.00	2.85	1.65	0.91	0.00	0.35	1.65	1.91	0.49
10	461006	Transcript	0	3.41	0.00	3.78	0.00	0.00	0.00	0.00	2.55	5.38	0.00	2.42	5.70	6.82	11.95	4.45	0.00	7.85	0.00	0.00	0.00	0.00	2.94	0.00
11	ER1a	ExonRegion	0	0.00	2.64	0.00	0.00	3.75	0.00	0.00	0.00	0.00	0.00	2.71	0.00	0.00	3.41	3.77	0.30	0.00	0.00	0.32	0.00	0.00	0.00	0.00
12	ER1b	ExonRegion	0	7.89	9.24	2.78	1.24	12.41	13.67	10.35	0.16	3.14	1.15	17.75	0.00	0.00	21.85	35.61	36.75	16.80	1.01	11.00	3.29	16.83	10.04	34.44
13	ER1c	ExonRegion	1	102.92	39.04	16.14	6.46	54.20	133.03	122.79	9.43	20.04	34.96	143.92	0.00	0.00	248.03	252.49	246.26	156.65	19.16	71.17	19.70	135.18	150.91	128.62
14	E1a_E3a	KnownJunction	1	323.24	95.25	43.85	28.37	135.31	321.86	252.70	59.15	68.92	108.31	299.34	0.00	0.00	301.02	327.83	519.01	313.32	106.37	124.52	41.87	247.36	309.60	218.79
15	E1a_E5a	KnownJunction	0	13.85	6.05	3.02	1.70	3.57	29.64	43.90	8.71	3.27	7.63	18.64	0.00	0.00	4.47	15.20	11.28	22.53	1.95	31.72	0.00	7.91	28.53	3.93
16	E1a_E7a	NovelJunction	0	0.00	0.00	1.83	0.00	7.98	16.18	10.07	7.15	3.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.56	0.00	2.94	0.00
17	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	3.06	0.00	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.65	1.42	0.37	0.00	0.00
18	ER2b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	3.67	0.00	3.46	0.00	0.82	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	3.19	2.13	2.20	0.00	0.00
19	ER2c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	3.67	0.00	3.46	0.00	1.96	0.34	1.15	0.00	0.00	5.21	0.00	0.78	0.00	3.19	2.13	5.70	0.00	0.95
20	E2_Ad	KnownBoundary	0	0.00	0.00	1.60	0.00	0.00	0.00	0.00	4.89	1.10	4.41	0.00	5.85	0.00	0.00	4.45	0.00	7.95	1.91	0.00	0.00	8.65	0.00	3.50
21	ER2d	ExonRegion	0	2.76	1.19	0.15	0.00	0.00	0.66	1.93	3.14	2.80	3.90	3.95	3.12	3.91	2.76	3.96	3.96	4.66	4.30	2.75	4.26	6.95	0.61	11.56
22	E2_Da	KnownBoundary	0	3.78	0.00	1.57	0.00	0.00	0.00	0.00	3.33	6.19	5.43	5.37	0.00	20.45	4.94	0.00	4.36	0.00	5.39	3.58	6.01	2.84	0.00	19.38
23	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER2e	ExonRegion	0	2.30	0.52	1.13	0.88	1.18	5.58	1.14	1.85	2.65	3.33	5.03	3.34	5.80	5.00	4.84	3.78	4.87	4.84	1.27	7.59	0.49	2.24	11.37
25	E2_Db	KnownBoundary	0	0.00	6.05	1.54	0.00	0.00	0.00	0.00	0.00	1.79	5.51	12.00	5.70	6.82	0.00	0.00	14.36	4.77	6.84	3.95	6.33	2.53	0.00	15.45
26	E2b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.12	0.00
27	ER2f	ExonRegion	0	0.03	2.03	0.43	0.04	0.52	0.03	5.98	3.62	6.48	4.81	4.03	2.10	5.47	4.08	1.29	5.37	3.62	5.90	0.58	8.30	9.37	2.84	11.87
28	E2_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	3.82	0.00	10.16	4.39	7.41	5.88	2.32	0.00	8.28	5.36	4.45	4.36	0.00	2.57	0.00	6.52	2.59	5.76	4.35
29	E2c_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00	0.00	0.00
30	ER2g	ExonRegion	0	0.00	0.00	0.00	0.00	3.51	0.03	3.70	1.93	2.06	2.43	4.44	0.00	7.07	6.04	4.11	0.09	2.66	2.70	0.05	3.27	6.41	1.74	7.85
31	E2d_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00
32	ER3a	ExonRegion	1	143.34	44.14	31.14	14.91	52.26	150.08	99.76	34.64	26.25	69.33	169.75	2.55	3.77	129.32	168.96	299.84	147.89	50.11	67.70	23.57	133.65	154.79	142.97
33	E3_Ab	KnownBoundary	0	54.31	11.45	27.26	14.35	7.47	29.64	23.72	53.03	16.72	59.53	44.27	12.30	0.00	24.55	9.39	59.90	28.24	39.38	18.07	5.11	35.83	18.31	27.83
34	ER3b	ExonRegion	1	15.07	11.02	38.65	32.05	21.87	23.02	13.01	57.50	50.51	112.46	144.52	10.88	16.44	208.50	173.21	244.15	121.56	76.68	49.54	37.12	104.01	92.85	102.23
35	E3_Ac	KnownBoundary	0	31.26	54.07	71.23	54.90	126.83	141.40	51.63	76.69	66.43	168.59	238.64	24.61	53.73	312.50	368.26	258.56	203.46	76.48	50.17	92.04	125.96	97.79	84.25
36	ER3c	ExonRegion	1	23.78	34.57	70.75	51.83	115.55	171.85	87.73	87.88	67.38	171.40	241.61	17.66	39.00	306.70	302.57	234.88	200.57	60.44	27.58	75.03	156.87	109.71	71.25
37	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	3.90	0.00	0.00	0.00	0.00	0.00	4.47	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E3a_E5a	KnownJunction	1	37.19	36.70	95.83	67.72	116.55	303.86	160.88	125.81	91.43	201.73	275.12	17.86	54.05	277.18	281.85	220.54	213.18	71.30	27.58	95.75	213.81	125.96	87.50
39	ER4a	ExonRegion	0	6.48	1.12	0.00	1.95	14.33	1.95	3.42	1.31	2.73	3.41	8.34	1.86	6.27	13.13	1.07	14.68	16.77	5.24	0.03	5.45	11.04	7.12	4.46
40	E4b_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.66	0.00	0.00	0.00	0.00	0.00
41	ER4b	ExonRegion	0	8.64	0.00	0.00	1.36	0.00	0.00	0.22	0.00	1.13	1.15	2.90	0.00	4.69	1.89	0.00	5.70	3.30	0.15	0.00	0.71	3.31	3.82	0.98
42	I4_SR1	SilentIntronRegion	0	12.58	4.10	3.66	7.94	19.39	3.78	5.81	18.53	5.47	5.84	11.60	12.96	22.05	12.69	12.06	15.56	4.80	4.84	3.80	4.86	6.56	9.52	7.83
43	I4_AR2	ActiveIntronRegion	0	9.69	4.96	8.31	10.07	6.85	15.57	5.84	28.99	10.67	10.22	16.01	9.91	24.68	19.08	14.84	16.37	9.25	7.63	2.02	6.81	13.25	11.39	12.11
44	E5_Aa	NovelBoundary	1	9.41	6.58	1.83	10.75	19.78	5.34	13.78	13.60	10.21	7.06	9.58	6.30	46.43	18.07	13.97	11.19	27.02	19.19	11.86	11.51	11.00	8.14	13.23
45	ER5a	ExonRegion	0	66.46	43.87	94.38	71.96	141.08	322.06	184.49	113.78	104.46	215.85	309.75	36.15	50.42	369.65	361.35	219.71	283.88	60.28	47.54	83.62	246.21	134.13	103.15
46	E5_Da	KnownBoundary	0	56.68	47.56	55.50	57.34	143.55	324.07	163.05	85.52	78.10	146.88	249.22	45.61	40.26	261.35	234.50	197.47	223.19	55.59	28.33	54.65	183.48	93.26	79.73
47	E5_Db	KnownBoundary	0	43.56	39.14	55.32	51.01	41.77	110.56	57.63	41.53	47.51	87.36	158.57	13.50	39.77	156.69	192.35	142.44	121.46	23.79	26.26	22.12	120.65	61.78	65.56
48	ER5b	ExonRegion	0	70.42	64.34	116.41	90.32	122.35	287.91	137.45	145.98	121.94	246.38	298.90	35.82	64.81	379.45	386.66	257.22	283.88	49.89	35.91	56.09	240.40	114.97	108.92
49	E5_Dc	KnownBoundary	0	87.79	84.00	76.76	73.25	68.34	102.67	39.00	155.92	112.56	181.75	282.18	75.62	84.90	335.45	373.70	208.15	247.59	62.76	62.68	56.12	179.65	100.30	72.13
50	ER5c	ExonRegion	0	73.20	74.56	103.95	95.91	82.17	185.75	81.75	154.41	134.78	242.19	330.85	46.18	79.93	370.98	369.06	248.54	282.09	65.44	55.35	52.66	231.76	120.84	99.48
51	ER5d	ExonRegion	0	166.08	77.35	138.88	115.24	117.80	142.61	75.42	204.06	173.95	338.85	457.83	104.55	125.99	513.06	437.52	471.39	397.33	169.54	89.35	103.05	292.98	175.07	208.25
52	E5d_E6a	KnownJunction	1	335.91	127.48	176.87	170.57	200.42	177.51	120.52	281.19	216.38	427.02	549.61	80.28	189.27	658.43	822.30	678.37	509.49	228.91	169.32	160.88	345.77	362.07	312.17
53	ER6a	ExonRegion	0	195.34	67.50	164.84	141.57	135.65	156.90	103.62	250.73	196.34	367.17	519.57	160.73	145.20	535.08	553.53	487.64	463.82	151.87	112.64	99.78	341.36	194.69	187.33
54	E6a_E7a	KnownJunction	0	134.10	76.96	222.20	193.65	92.02	146.05	136.37	281.36	214.00	422.67	446.43	152.15	155.67	389.90	413.01	460.90	361.57	237.49	103.91	104.25	276.89	165.88	214.69
55	E6a_E7b	KnownJunction	0	3.41	0.00	3.78	0.00	0.00	0.00	0.00	2.55	5.38	0.00	2.42	5.70	6.82	11.95	4.45	0.00	7.85	0.00	0.00	0.00	0.00	2.94	0.00
56	ER7a	ExonRegion	0	169.13	105.71	203.87	196.91	163.42	245.22	139.90	311.38	209.86	415.01	612.87	190.74	242.93	512.44	565.96	558.37	474.47	263.99	150.48	126.95	357.08	247.82	244.45
57	E7_Da	KnownBoundary	0	259.08	159.97	224.59	200.17	265.20	331.29	182.79	354.67	193.55	377.97	578.99	165.35	231.97	541.47	685.83	550.28	441.51	227.45	182.03	148.16	353.61	259.39	230.31
58	ER7b	ExonRegion	0	150.53	88.44	189.09	167.52	177.35	204.26	115.28	274.95	179.63	359.77	437.21	139.15	130.74	511.26	521.05	377.36	319.90	145.81	92.60	99.81	306.12	164.52	184.85
59	E7_Ab	KnownBoundary	0	239.30	109.91	212.00	167.71	252.80	261.38	160.93	268.58	197.68	368.38	541.14	209.02	132.46	563.07	533.53	473.21	366.62	165.52	103.34	146.37	336.32	204.58	225.61
60	ER7c	ExonRegion	0	276.40	118.54	224.50	220.98	269.39	296.00	200.18	311.37	213.16	394.25	638.30	191.43	228.40	578.03	630.82	519.63	432.80	190.15	139.02	136.46	333.25	234.04	220.58
61	E7_Db	KnownBoundary	0	432.52	169.11	234.41	261.51	321.56	338.10	259.50	350.36	265.10	461.68	611.79	179.01	292.03	556.13	849.75	632.14	430.67	246.98	205.28	152.57	318.15	288.35	239.96
62	ER7d	ExonRegion	0	340.80	130.50	204.72	184.48	233.11	262.12	168.94	319.62	197.35	431.18	615.71	177.47	146.98	574.86	698.62	535.36	431.33	188.44	121.95	121.37	308.46	234.63	241.18
63	E7_Dc	KnownBoundary	0	332.06	203.38	197.72	162.12	253.23	272.34	184.20	322.72	219.44	460.39	571.14	197.16	139.76	518.93	726.87	603.94	387.84	161.00	92.90	139.91	293.26	186.82	162.36
64	ER7e	ExonRegion	0	170.31	68.20	133.07	122.32	180.85	168.64	105.11	222.29	150.50	283.58	455.09	118.06	103.33	369.32	509.77	394.86	303.48	122.63	96.61	73.11	225.26	182.46	167.02