Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LAPTM5 Gene 0 300.57 1.77 29.98 39.16 131.86 64.18 49.22 106.69 94.58 39.85 775.51 548.74 435.72 1100.73 1219.81 997.21 830.17 0.20 0.79 0.16 0.41 35.37 16.52 2 424259 Transcript 0 12.08 0.00 0.22 0.00 2.68 2.97 2.14 0.10 1.45 0.57 39.17 3.95 13.79 142.01 144.72 113.38 44.17 0.00 0.00 0.00 0.00 0.86 1.21 3 294507 Transcript 1 237.10 1.99 25.68 28.12 91.21 57.13 53.84 89.55 64.24 29.89 317.14 549.71 264.45 749.17 851.92 637.73 347.87 0.00 0.00 0.00 0.00 19.39 9.52 4 476492 Transcript 0 31.50 0.00 3.52 2.12 8.98 2.54 3.06 15.62 14.78 0.75 33.02 31.00 38.21 51.22 68.20 56.74 50.46 0.00 0.45 0.00 0.00 1.34 0.16 5 464569 Transcript 0 1.73 0.00 0.00 0.17 0.87 0.00 0.43 0.84 0.30 0.00 16.42 1.50 4.84 17.53 32.29 3.15 19.48 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 1 24.15 0.00 0.43 0.00 5.35 5.93 4.28 0.20 2.91 1.15 78.34 7.89 27.59 284.03 289.44 226.76 88.35 0.00 0.00 0.00 0.00 1.72 2.42 7 ER1b ExonRegion 1 579.86 1.61 4.92 11.70 177.15 137.39 79.84 35.78 29.98 9.48 713.76 106.45 103.48 1026.13 1399.51 1436.10 805.58 0.00 0.00 0.00 2.31 37.80 30.30 8 E1_Ac KnownBoundary 1 1904.78 8.68 10.76 42.09 548.73 388.13 229.65 96.65 78.76 26.67 1489.96 111.49 141.22 1866.57 2865.94 3091.92 1747.36 0.00 0.00 0.00 6.18 65.76 81.09 9 ER1c ExonRegion 0 1040.38 4.25 28.53 44.81 251.68 233.66 119.74 129.48 118.79 48.02 1297.31 420.75 376.30 1839.48 2290.66 2226.94 1661.23 0.00 1.66 0.00 1.96 115.57 47.77 10 E1a_E3a KnownJunction 0 305.09 0.00 35.72 34.66 85.48 48.21 16.12 138.71 91.41 51.33 1254.74 682.87 474.16 1220.27 1355.71 1167.98 1194.58 0.00 0.00 0.00 0.00 21.19 18.44 11 E1a_E4a NovelJunction 0 3.26 0.00 0.00 1.27 0.00 0.00 0.00 0.00 3.24 0.00 35.43 12.60 13.64 32.14 35.97 26.32 37.12 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 3.46 0.00 0.00 0.33 1.75 0.00 0.87 1.68 0.60 0.00 13.88 3.00 2.87 13.05 24.64 6.31 21.11 0.00 0.00 0.00 0.00 0.00 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.95 0.00 6.82 22.01 39.93 0.00 17.86 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 210.93 0.13 44.75 56.31 131.94 62.45 32.62 207.23 202.55 99.10 2489.33 1081.58 755.49 2559.80 2920.64 2458.96 2813.07 0.31 5.79 0.38 2.58 98.28 54.23 15 E3_Da KnownBoundary 0 26.97 0.00 1.83 0.00 0.00 0.00 0.00 3.86 7.00 0.00 2.32 24.16 13.64 27.37 36.71 13.07 37.68 0.00 0.00 0.00 0.00 0.00 0.00 16 E3a_E3b KnownJunction 0 247.01 0.00 57.72 121.66 223.94 95.57 53.53 355.04 332.09 133.69 2309.48 2003.90 1233.52 5281.21 6388.17 5729.95 2583.17 1.95 11.86 3.07 2.41 297.72 111.23 17 E3a_E4a NovelJunction 1 6.52 0.00 1.83 1.43 0.00 0.00 1.72 14.21 0.00 0.00 4.79 0.00 13.15 24.25 25.84 55.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3b ExonRegion 0 31.50 0.00 3.52 2.12 8.98 2.54 3.06 15.62 14.78 0.75 33.02 31.00 38.21 51.22 68.20 56.74 50.46 0.00 0.45 0.00 0.00 1.34 0.16 19 E3_Db NovelBoundary 1 297.98 5.79 75.51 134.58 261.80 77.29 79.14 333.32 327.95 125.23 2370.28 1583.92 1098.79 5378.21 7477.24 6866.06 2342.96 2.49 0.00 2.24 2.72 308.43 106.53 20 ER3c ExonRegion 1 208.83 2.86 65.67 122.51 210.39 76.82 55.21 327.06 315.91 132.19 2360.43 1603.67 1049.00 5525.49 6919.06 6343.51 2407.21 1.85 3.54 2.13 2.20 314.46 111.81 21 ER3d ExonRegion 0 225.95 2.70 90.98 136.93 299.19 116.95 58.55 341.18 365.85 162.13 3136.31 2000.57 1859.07 3649.50 4404.63 4960.11 2970.20 1.21 0.00 0.26 0.67 156.39 76.83 22 E3c_E4a KnownJunction 0 410.96 2.57 117.38 144.57 518.25 190.06 92.92 385.23 417.73 196.07 3853.08 2891.89 2276.31 4022.68 5308.13 4823.01 3707.34 0.00 0.00 0.00 0.00 112.85 88.52 23 ER4a ExonRegion 0 470.88 7.11 101.67 145.30 600.43 327.10 206.12 409.62 419.80 170.03 3727.95 2164.20 1653.87 4815.80 5127.73 3949.38 3990.89 1.58 3.78 0.84 2.61 151.43 65.95 24 E4a_E5a KnownJunction 0 1297.42 13.42 103.96 171.81 538.37 363.26 212.25 410.90 488.07 198.19 4228.02 2830.67 1982.66 5837.51 6936.29 4742.60 4466.01 1.99 0.00 0.00 0.00 190.01 62.49 25 ER5a ExonRegion 0 1162.40 7.11 124.11 205.33 529.45 236.44 144.46 463.87 458.22 174.51 3770.52 2528.09 2690.13 5631.69 5749.69 4863.97 4081.49 1.08 1.53 1.70 2.44 155.67 72.01 26 E5a_E6a KnownJunction 0 1291.34 3.35 161.76 223.58 600.85 214.48 180.45 438.92 446.20 156.01 3407.92 3433.42 3825.40 5766.58 5669.46 5471.73 3560.16 2.16 11.39 0.00 2.97 170.41 99.02 27 ER6a ExonRegion 0 987.38 4.79 152.64 197.97 573.61 192.84 182.14 491.71 432.32 192.02 4117.80 3415.77 2167.53 5326.50 4893.36 4692.09 4136.47 0.48 4.81 0.27 0.39 138.01 64.67 28 E6a_E7a KnownJunction 0 1951.09 9.54 153.45 159.39 754.50 265.93 181.11 498.19 406.48 184.14 3501.78 2756.40 1453.96 4844.39 4482.12 3264.96 3434.69 0.00 0.00 2.49 0.00 74.58 79.73 29 ER7a ExonRegion 0 966.98 5.69 128.52 158.36 515.96 213.43 187.83 479.19 380.68 180.95 2671.87 2103.79 2066.79 3859.36 3698.22 2804.18 2879.69 1.43 2.47 0.98 0.00 88.99 41.33 30 E7a_E8a KnownJunction 0 1173.69 9.87 161.88 208.50 969.86 344.29 347.07 540.37 421.64 193.16 3250.77 2412.79 1828.61 4354.19 4372.10 3871.46 3709.21 0.00 4.80 0.00 0.00 155.35 39.18 31 ER8a ExonRegion 0 823.62 11.01 133.27 176.99 639.69 312.19 259.04 463.88 355.71 161.48 2827.03 2818.48 2045.18 3963.13 3902.89 3690.97 3078.71 0.00 3.19 0.00 0.00 138.02 36.86 32 E8_Db KnownBoundary 1 952.76 14.41 134.89 193.58 428.69 255.25 189.77 459.66 341.29 150.10 2261.41 3164.68 2319.00 3234.64 3431.49 4135.84 2386.81 1.99 4.24 0.00 0.00 130.43 43.71 33 E8b_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER8b ExonRegion 1 598.45 10.17 120.39 164.91 370.59 235.64 168.14 401.43 306.31 137.34 2157.12 3052.27 2051.89 3247.83 3217.49 3565.81 2244.61 0.00 0.80 0.00 0.00 114.07 32.30 35 ER8c ExonRegion 1 228.41 3.10 36.90 42.87 131.45 102.28 91.73 150.08 111.06 50.39 533.96 1037.76 474.23 1339.30 1358.92 1191.31 611.73 0.00 0.00 0.00 0.00 34.71 15.50 36 E8_Ab KnownBoundary 0 305.09 3.29 5.65 9.39 158.66 53.09 52.91 24.19 23.55 8.25 100.82 49.97 129.54 58.98 74.29 168.25 88.92 0.00 0.00 0.00 0.00 3.06 7.00 37 ER8d ExonRegion 0 459.39 2.48 0.00 0.03 75.09 73.16 82.17 0.07 2.07 0.00 3.67 7.55 6.93 3.53 5.66 6.37 2.40 0.00 0.00 0.00 0.00 0.00 0.84 38 E8_Dc KnownBoundary 0 286.94 0.00 11.18 10.29 87.18 12.95 10.69 43.62 21.33 8.35 242.27 144.80 72.72 63.04 93.45 167.65 150.82 0.00 0.00 0.00 0.00 10.96 11.95 39 ER8e ExonRegion 0 245.79 0.87 14.47 13.38 50.98 11.99 15.95 29.02 17.43 9.38 100.32 61.66 54.66 159.05 344.92 84.15 84.00 0.00 0.00 0.00 0.00 4.08 3.54