Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC28B Gene 0 23.35 15.46 29.59 22.00 30.35 45.85 26.87 36.49 22.86 50.66 160.39 11.82 16.95 82.86 133.68 99.40 166.41 24.12 24.53 21.85 18.48 8.98 18.12 2 469003 Transcript 0 10.70 3.99 2.17 4.43 7.77 17.97 9.43 6.59 4.16 7.48 26.42 2.23 4.42 20.22 25.97 28.20 37.14 4.69 5.89 3.14 5.10 3.04 5.42 3 421922 Transcript 0 13.86 9.50 10.14 10.21 13.69 12.51 10.88 13.17 8.41 11.76 17.70 3.26 2.88 10.24 10.23 15.96 16.72 3.48 1.47 4.93 6.95 3.25 4.72 4 461819 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 373602 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 483009 Transcript 0 6.66 4.38 7.85 4.10 6.47 20.67 4.26 15.92 10.60 15.21 93.88 19.30 6.83 43.65 45.03 23.98 80.83 4.80 3.78 3.34 4.29 1.88 8.19 7 IG13_AR1 ActiveIntergenicRegion 0 4.71 1.22 5.82 4.08 9.02 3.90 9.83 16.68 8.94 13.58 2.13 1.33 1.55 1.91 3.48 2.98 3.15 3.45 3.35 3.41 5.84 3.90 9.57 8 ER1a ExonRegion 0 20.72 6.35 0.07 5.25 7.46 38.68 12.84 3.25 0.49 8.51 62.79 0.00 1.99 47.44 62.16 73.31 86.02 9.01 10.23 2.84 6.21 1.26 5.43 9 E1_Ab KnownBoundary 0 22.67 9.80 1.83 5.89 7.81 68.54 21.46 2.05 1.22 5.83 54.65 0.00 0.00 60.57 44.01 47.42 78.26 0.00 4.42 8.88 14.89 2.94 4.35 10 E1_Ac KnownBoundary 0 30.23 10.06 1.69 0.00 4.33 5.79 8.92 0.00 0.00 4.54 51.01 0.00 0.00 3.00 0.00 95.53 95.09 0.00 19.20 3.26 3.09 0.00 8.71 11 E1_Ad KnownBoundary 1 72.46 50.85 20.55 24.54 62.14 131.00 58.25 22.80 13.92 51.55 343.61 5.70 0.00 108.19 371.96 587.97 442.36 49.54 43.30 30.87 8.22 16.59 39.86 12 ER1b ExonRegion 1 60.42 24.77 8.02 17.97 42.81 98.86 42.13 14.14 5.61 35.66 262.17 0.00 4.69 113.98 263.49 363.14 338.49 30.57 31.27 17.02 12.62 9.85 21.62 13 ER1c ExonRegion 1 78.84 46.01 22.82 23.17 63.88 146.02 64.87 24.20 10.04 58.64 427.90 0.00 4.69 153.48 422.49 592.94 528.56 51.28 61.32 29.79 15.43 14.58 43.68 14 ER1d ExonRegion 1 111.92 96.36 84.64 50.09 177.87 332.50 174.74 67.05 33.15 140.12 642.77 9.65 23.12 233.59 530.22 926.42 745.08 157.87 278.13 86.60 55.21 29.28 122.36 15 E1_Da NovelBoundary 0 9.93 0.00 0.00 4.59 19.10 20.84 5.65 7.11 8.10 9.78 2.63 0.00 0.00 0.00 0.00 3.25 4.11 6.43 0.00 0.00 5.44 0.00 11.35 16 E1a_E2b KnownJunction 0 80.01 107.09 129.42 62.06 190.32 331.91 212.03 104.70 47.16 186.80 314.34 13.50 12.82 80.17 229.19 397.93 469.28 199.68 235.40 78.62 56.28 17.45 58.05 17 E2_Aa NovelBoundary 0 6.00 3.09 11.32 12.02 6.79 61.73 10.51 18.40 15.71 16.36 36.17 0.00 0.00 35.85 33.38 24.78 68.44 5.02 9.22 5.37 6.05 2.33 7.60 18 ER2a ExonRegion 0 13.31 5.87 12.26 4.63 12.95 29.42 8.52 20.74 14.08 20.49 135.02 7.09 7.49 63.41 38.51 38.13 108.35 9.60 7.55 6.68 6.06 3.77 16.38 19 E2_Ab KnownBoundary 0 7.26 3.29 13.28 16.88 8.57 25.44 14.75 24.11 11.98 25.01 134.24 0.00 0.00 142.03 78.13 85.45 96.21 10.45 4.80 3.26 13.47 3.12 34.74 20 ER2b ExonRegion 0 21.72 16.14 70.02 33.91 43.78 87.14 31.15 61.27 38.87 121.78 439.01 13.94 21.69 208.28 377.05 336.57 523.55 66.99 93.63 46.35 47.36 18.11 42.77 21 E2_Da NovelBoundary 0 3.41 3.35 8.10 2.70 0.00 2.61 13.29 13.47 4.28 6.10 17.21 0.00 0.00 11.48 4.45 10.85 13.74 13.51 9.04 0.00 7.85 0.00 7.68 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 0.00 2.51 0.00 23 E2a_E4a KnownJunction 0 29.12 17.83 81.16 57.20 50.17 133.16 27.12 101.95 62.07 151.77 509.34 24.46 46.59 290.25 425.12 583.27 456.57 149.02 100.99 78.23 29.65 13.41 76.49 24 E3_Aa NovelBoundary 0 9.63 0.00 4.97 3.60 25.38 34.92 15.10 19.80 9.29 7.15 22.32 6.30 6.82 10.12 0.00 0.00 33.85 3.69 0.00 6.14 11.55 5.69 7.60 25 ER3a ExonRegion 0 11.38 5.63 6.43 8.05 15.84 15.23 15.45 16.51 11.99 13.93 16.47 6.68 11.27 13.23 15.75 11.30 20.73 5.04 7.44 6.59 9.09 5.34 10.85 26 I3 Intron 0 21.52 3.67 6.29 13.99 27.64 18.04 23.01 16.05 9.96 10.37 14.58 3.51 5.70 14.04 15.11 19.98 13.53 4.52 7.84 8.72 13.00 10.25 18.78 27 I3_SR1 SilentIntronRegion 0 21.66 3.69 6.33 14.08 27.82 18.16 23.16 16.15 10.02 10.43 14.68 3.53 5.74 14.13 15.21 20.11 13.62 4.55 7.89 8.78 13.09 10.32 18.90 28 E4_Aa NovelBoundary 0 26.38 9.93 12.00 12.82 12.65 10.73 19.48 10.93 14.44 15.58 9.53 0.00 0.00 19.78 13.35 4.36 12.25 6.34 9.41 9.78 2.29 2.94 31.50 29 ER4a ExonRegion 0 54.99 44.78 73.97 57.90 99.10 191.96 102.71 115.56 64.00 147.88 481.33 44.36 37.83 274.90 438.66 223.12 469.56 71.13 39.56 69.42 39.76 22.46 33.92 30 E4_Da NovelBoundary 0 15.93 0.00 8.22 16.61 7.30 7.38 3.58 8.58 2.75 13.03 4.53 0.00 6.82 7.06 11.13 4.10 14.03 6.34 4.14 5.69 17.05 2.45 11.95 31 E4a_E5a KnownJunction 0 91.87 90.05 96.24 63.56 53.14 117.89 54.63 124.95 64.12 207.00 548.03 57.62 48.54 278.00 433.03 240.71 510.89 51.94 29.18 63.21 38.43 13.47 29.96 32 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E4a_E6a KnownJunction 1 0.00 2.89 3.43 3.56 0.00 11.92 0.00 11.09 7.12 9.94 52.75 31.51 6.17 23.90 51.55 9.83 53.30 0.00 0.00 0.00 2.53 0.00 0.00 34 E5_Aa NovelBoundary 0 23.34 3.35 6.53 13.22 4.33 10.11 14.31 18.73 9.26 14.72 8.90 0.00 6.17 14.54 0.00 12.65 7.76 7.67 8.47 5.18 32.00 8.88 31.33 35 ER5a ExonRegion 0 97.93 86.00 106.15 74.14 54.24 90.54 39.36 129.99 68.32 187.23 640.96 49.61 53.25 279.28 464.80 216.04 570.78 56.39 41.41 86.39 49.12 31.77 28.94 36 E5_Ab KnownBoundary 0 175.36 69.46 139.14 101.75 88.46 85.01 54.23 162.20 85.71 206.17 645.85 42.76 47.72 263.82 486.43 199.26 557.36 78.18 45.74 101.05 59.55 35.39 31.76 37 ER5b ExonRegion 0 51.42 27.73 99.78 73.49 72.90 60.47 41.89 107.27 65.71 174.22 543.22 33.48 71.89 251.73 437.21 209.86 502.91 81.06 40.34 70.07 50.02 20.79 39.44 38 E5_Da NovelBoundary 0 11.26 0.00 16.76 10.12 18.76 39.35 14.00 17.83 12.41 10.88 16.37 0.00 20.94 16.66 0.00 4.10 12.62 4.81 4.80 8.76 11.68 0.00 24.58 39 E5a_E6a KnownJunction 0 17.78 8.81 74.78 42.65 47.03 16.47 15.46 66.83 54.74 99.04 416.47 36.46 59.09 150.86 311.76 168.84 354.46 41.33 26.07 29.08 19.21 19.59 11.18 40 I5 Intron 0 13.86 2.85 10.25 10.93 16.90 9.01 8.98 18.68 9.90 13.99 10.85 8.58 3.74 8.49 13.02 9.73 6.95 5.59 2.24 5.48 17.00 6.82 18.55 41 I5_AR1 ActiveIntronRegion 0 13.99 2.88 10.35 11.03 17.06 9.09 9.06 18.84 10.00 14.12 10.95 8.66 3.78 8.57 13.11 9.82 7.01 5.64 2.26 5.53 17.14 6.89 18.72 42 E6_Aa NovelBoundary 0 20.82 3.22 15.82 31.33 19.69 10.73 26.63 32.33 11.92 19.69 13.00 12.60 0.00 7.18 40.30 10.94 4.02 8.46 4.80 2.49 10.87 8.82 22.96 43 E6a_E6b KnownJunction 0 30.82 16.38 95.92 63.96 11.54 31.00 10.91 64.49 41.72 114.59 308.97 34.81 34.90 327.39 431.92 207.30 256.10 28.77 49.13 65.58 29.65 20.15 23.47 44 ER6a ExonRegion 0 28.62 28.03 117.64 77.33 37.69 41.46 23.14 102.66 73.68 159.62 483.39 63.62 55.67 279.91 442.76 242.16 440.45 57.92 43.49 59.48 48.96 28.63 35.24 45 ER6b ExonRegion 0 13.86 9.50 10.14 10.21 13.69 12.51 10.88 13.17 8.41 11.76 17.70 3.26 2.88 10.24 10.23 15.96 16.72 3.48 1.47 4.93 6.95 3.25 4.72 46 E6_Ab KnownBoundary 0 0.00 0.00 1.83 1.43 0.00 0.00 6.23 6.86 2.84 7.04 0.00 0.00 0.00 2.47 0.00 3.93 8.42 1.87 0.00 3.20 2.66 0.00 0.00 47 ER6c ExonRegion 0 19.15 13.22 99.62 61.74 12.98 29.34 10.39 85.64 55.33 136.31 311.58 18.62 29.55 264.33 395.59 182.04 294.60 40.37 42.37 57.34 26.33 13.33 25.99 48 ER6d ExonRegion 0 25.70 13.53 45.11 36.38 17.70 35.11 25.08 38.05 27.83 60.69 164.67 8.35 20.65 115.78 192.91 98.04 204.03 17.06 21.15 22.49 22.83 6.72 5.07 49 ER6e ExonRegion 0 13.23 7.12 7.05 3.75 8.70 11.92 11.92 4.32 0.62 7.74 27.54 3.25 5.86 28.83 34.82 11.89 24.76 0.92 3.98 6.38 4.41 0.00 3.67