Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MED18 Gene 0 29.88 19.32 24.72 23.24 44.94 53.36 41.00 26.49 26.64 34.24 107.17 43.34 45.42 103.61 117.67 95.04 82.46 22.35 25.66 22.95 33.94 30.42 45.92 2 479574 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 437227 Transcript 0 0.00 0.00 0.00 1.36 6.69 0.00 0.00 1.73 0.00 0.00 0.00 2.16 2.35 6.50 4.35 0.00 1.65 0.00 0.00 0.00 0.00 0.00 0.00 4 373842 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 398997 Transcript 0 0.00 17.23 10.53 15.75 3.48 2.33 1.99 7.85 1.19 3.49 0.00 11.70 39.12 2.65 11.13 7.09 4.21 1.74 4.33 7.80 2.72 0.00 0.00 6 475655 Transcript 0 0.00 0.00 0.58 0.57 2.39 0.00 1.18 0.33 0.43 0.00 0.34 0.00 0.00 0.00 0.61 1.93 0.00 0.00 0.00 0.00 0.39 0.00 0.05 7 474683 Transcript 0 2.32 0.00 0.00 1.67 1.47 1.01 1.08 0.00 0.50 1.37 5.90 0.98 2.12 2.84 6.60 4.14 4.66 0.00 0.00 0.00 0.00 0.57 0.00 8 ER1a ExonRegion 0 4.63 0.66 1.06 0.77 6.29 14.57 2.72 0.84 0.70 1.67 7.00 0.00 0.00 11.68 11.68 19.52 3.39 1.95 1.72 0.00 3.87 4.00 9.92 9 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 5.28 1.77 0.00 1.56 0.00 0.00 0.00 0.00 4.77 4.45 12.82 0.00 0.00 0.00 0.00 0.00 3.00 0.00 10 E1_Ac KnownBoundary 0 11.34 0.00 0.00 1.50 25.64 28.62 4.50 0.00 0.00 0.00 13.11 0.00 0.00 18.89 0.00 34.26 13.56 0.00 0.00 0.00 6.30 0.00 30.47 11 E1_Ad KnownBoundary 1 49.71 0.00 11.44 12.82 58.32 151.79 32.42 9.08 2.86 22.70 54.43 0.00 0.00 21.07 56.74 117.15 45.07 17.24 33.51 2.56 32.31 63.81 56.94 12 ER1b ExonRegion 1 26.39 4.19 9.44 6.73 51.94 113.37 28.04 5.80 2.69 13.90 55.14 0.00 0.00 104.13 68.78 129.90 23.88 15.43 26.79 0.38 32.41 50.25 72.03 13 ER1c ExonRegion 1 58.05 6.10 9.80 8.76 63.45 157.18 45.01 7.41 5.12 20.48 79.52 0.00 0.00 132.48 93.67 164.32 45.27 21.91 29.58 2.13 39.35 66.97 92.71 14 ER1d ExonRegion 1 86.74 12.37 17.59 23.39 118.90 197.37 79.74 15.89 16.42 32.69 162.02 0.00 8.62 192.51 131.40 224.25 116.06 35.67 57.34 12.42 51.61 58.04 98.95 15 E1_Da KnownBoundary 1 102.98 11.05 26.97 39.52 163.50 152.92 64.35 20.41 32.90 31.70 156.72 5.25 19.64 132.32 133.75 219.09 148.48 46.43 45.08 18.15 49.98 31.54 72.90 16 E1a_E3a KnownJunction 0 0.00 0.00 0.00 1.43 0.00 13.97 10.86 0.00 0.00 1.05 1.95 0.00 0.00 5.12 4.45 4.36 3.93 0.00 0.00 0.00 0.00 0.00 4.35 17 ER1e ExonRegion 1 44.22 5.27 25.32 22.34 48.59 54.16 28.54 18.92 29.25 32.85 128.40 13.22 13.65 73.00 83.20 116.97 100.32 34.74 28.27 12.27 40.22 19.91 44.47 18 E1b_E3a KnownJunction 0 18.15 5.85 28.65 9.99 15.11 37.36 25.75 20.00 23.73 44.67 139.19 30.01 37.98 37.50 67.62 64.68 96.40 18.49 8.66 2.94 41.51 12.86 22.62 19 E2_Aa NovelBoundary 0 702.12 373.75 145.97 172.14 467.91 313.91 464.02 140.60 121.38 112.09 70.54 65.27 88.96 41.26 62.67 180.98 172.70 99.28 170.83 209.33 88.40 109.36 115.24 20 ER2a ExonRegion 0 4.64 0.00 0.00 1.48 2.93 2.01 2.16 0.00 1.01 1.25 9.12 1.96 4.24 5.68 6.89 3.93 4.54 0.00 0.00 0.00 0.00 1.14 0.00 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 1.50 2.68 0.00 0.00 0.00 6.30 4.36 4.77 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3a ExonRegion 1 13.51 5.78 25.59 30.03 25.79 29.99 11.14 27.85 23.79 57.40 217.81 34.79 33.44 172.57 147.92 164.94 134.34 25.99 44.09 11.91 57.57 50.68 73.54 23 E3_Da KnownBoundary 0 0.00 0.00 1.71 1.83 0.00 0.00 0.00 1.68 1.48 0.00 2.16 0.00 0.00 0.00 5.19 3.85 0.00 0.00 0.00 0.00 2.47 0.00 0.00 24 E3a_E4a KnownJunction 1 31.41 6.38 36.13 42.85 94.65 52.53 9.45 45.92 25.93 71.21 167.78 64.52 44.96 182.24 235.74 330.51 115.29 52.15 45.27 20.39 34.72 42.37 123.01 25 ER3b ExonRegion 0 0.00 0.00 0.58 0.57 2.39 0.00 1.18 0.33 0.43 0.00 0.34 0.00 0.00 0.00 0.61 1.93 0.00 0.00 0.00 0.00 0.39 0.00 0.05 26 E3_Db NovelBoundary 0 3.78 0.00 3.25 0.00 4.16 22.83 5.83 1.68 0.00 2.95 0.00 0.00 0.00 2.47 4.45 0.00 4.49 0.00 0.00 0.00 0.00 0.00 0.00 27 ER4a ExonRegion 0 28.20 15.64 30.29 43.77 99.00 140.17 53.59 41.44 27.38 64.74 176.00 63.84 45.10 166.27 167.93 150.51 114.87 28.98 23.45 17.69 64.36 47.66 47.14 28 E4_Da KnownBoundary 0 17.48 15.46 38.05 37.06 69.19 96.76 44.78 28.79 27.26 69.44 113.92 30.61 40.09 149.98 139.32 129.20 75.36 13.56 13.55 3.26 25.27 53.70 39.27 29 ER4b ExonRegion 0 37.18 20.47 42.69 39.45 62.01 57.61 38.57 43.08 38.09 56.43 177.55 69.27 70.54 179.30 180.42 120.95 112.72 14.73 20.94 19.23 45.40 40.91 49.26 30 E4_Db KnownBoundary 0 14.22 14.93 18.69 15.08 51.44 43.10 37.14 6.45 22.48 24.82 118.08 92.28 46.26 130.20 131.53 56.82 91.72 8.87 17.51 12.91 15.07 28.84 32.01 31 ER4c ExonRegion 0 5.26 8.76 10.46 7.98 19.20 28.90 21.61 6.86 11.45 16.94 41.93 35.19 27.76 68.29 103.74 34.18 39.45 5.66 7.30 7.86 8.71 9.98 16.96 32 E4_Dc KnownBoundary 0 239.89 321.26 472.90 531.23 178.01 227.60 310.38 493.46 450.63 462.35 195.52 54.32 41.39 137.09 243.90 400.66 388.12 534.09 229.94 346.94 237.10 209.72 410.26 33 E4c_E4b KnownJunction 0 0.00 17.23 10.53 15.75 3.48 2.33 1.99 7.85 1.19 3.49 0.00 11.70 39.12 2.65 11.13 7.09 4.21 1.74 4.33 7.80 2.72 0.00 0.00 34 ER4d ExonRegion 0 37.72 34.47 25.30 18.85 37.88 39.43 59.97 26.42 34.03 25.79 69.45 48.58 53.53 67.69 112.45 82.07 77.18 34.61 35.04 43.12 29.51 26.77 53.28 35 E4_Ab KnownBoundary 0 11.78 19.67 22.77 27.17 17.57 28.85 19.12 34.75 32.52 29.36 60.44 25.21 7.47 71.34 110.64 37.00 60.68 27.36 13.08 6.07 19.40 36.80 19.63 36 ER4e ExonRegion 0 7.40 3.28 8.25 8.03 20.23 35.42 22.74 14.95 9.80 12.05 46.07 25.37 43.26 44.72 50.92 34.58 48.53 4.28 8.84 5.06 12.34 15.90 20.49 37 ER4f ExonRegion 0 0.00 0.00 0.00 1.36 8.03 0.00 1.32 1.73 0.00 0.00 0.00 4.33 9.38 12.99 11.61 0.00 3.30 0.00 0.00 0.00 0.00 0.00 0.00 38 ER4g ExonRegion 0 0.00 0.00 0.00 1.36 6.69 0.00 0.00 1.73 0.00 0.00 0.00 2.16 2.35 6.50 4.35 0.00 1.65 0.00 0.00 0.00 0.00 0.00 0.00