Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATPIF1 Gene 0 170.77 81.31 136.74 110.92 239.49 259.66 140.69 213.78 171.59 254.03 259.17 205.93 131.46 363.14 500.82 347.72 276.45 97.45 94.17 102.86 124.94 84.98 87.29 2 417632 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 373848 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 497986 Transcript 1 11.85 0.41 0.98 1.91 0.54 0.37 2.91 1.73 3.95 2.52 1.16 21.65 2.81 10.72 11.61 1.19 1.32 0.00 0.00 3.83 0.88 2.08 2.35 5 335514 Transcript 1 10.45 2.96 295.70 308.29 80.22 21.64 19.17 553.76 540.10 752.51 1853.52 676.42 401.11 3695.82 7031.60 3817.89 1784.66 518.54 1179.23 494.85 652.74 707.43 1524.24 6 465645 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 468425 Transcript 1 33.30 4.83 13.92 5.97 61.47 17.88 25.20 13.24 11.15 11.18 26.56 86.95 63.95 107.12 32.25 29.18 14.74 3.39 15.61 11.21 1.53 1.62 4.84 8 ER1a ExonRegion 0 0.42 0.00 0.00 0.00 4.01 1.10 2.38 0.00 0.00 1.26 2.32 0.00 0.00 2.92 11.61 3.86 1.65 0.00 0.00 1.70 1.76 1.04 1.17 9 E1_Ac KnownBoundary 0 40.60 0.00 1.83 0.00 81.32 121.18 80.07 0.00 0.00 4.81 24.74 5.85 6.01 71.52 190.49 90.06 52.55 5.10 21.37 9.20 45.10 17.27 41.83 10 ER1b ExonRegion 0 28.84 5.25 7.40 6.64 77.60 80.84 72.21 7.13 1.18 6.79 28.43 0.00 6.64 61.65 164.53 87.31 63.82 6.08 14.60 9.22 40.22 11.20 22.39 11 E1_Ad KnownBoundary 1 659.38 115.64 89.20 102.45 1575.47 1210.84 922.29 106.34 67.51 117.20 700.76 0.00 37.98 1556.54 2070.71 1487.81 1073.21 236.86 363.02 161.97 677.45 290.06 531.81 12 ER1c ExonRegion 1 321.71 63.62 60.28 55.16 797.88 643.40 520.25 75.56 38.70 83.78 421.56 0.00 22.11 1142.99 1891.06 865.31 653.26 17.77 193.55 96.45 449.35 181.07 281.92 13 ER1d ExonRegion 1 339.88 67.63 163.57 111.71 390.47 418.79 293.15 223.52 221.50 352.45 706.74 47.40 82.48 681.53 1918.18 975.50 914.35 82.10 212.10 188.24 547.55 204.08 271.56 14 E1a_E2a KnownJunction 0 36.67 21.05 124.03 75.18 28.61 80.18 46.90 166.31 170.40 251.32 323.08 136.54 118.34 327.74 538.48 564.55 391.77 167.02 80.57 61.68 313.15 108.51 62.32 15 ER2a ExonRegion 1 29.01 15.56 198.78 135.47 52.18 72.79 31.39 334.91 349.78 558.72 1454.61 206.50 162.98 1576.44 2042.26 1000.90 1814.81 267.90 292.26 286.91 967.02 243.34 335.00 16 E2_Da KnownBoundary 0 13.71 20.19 54.11 58.70 24.11 96.31 20.80 137.11 115.42 216.61 72.39 62.87 39.45 242.69 183.20 173.29 102.01 125.11 42.64 87.06 33.73 31.96 24.33 17 E2a_E2b KnownJunction 0 0.00 2.96 13.01 0.00 3.48 0.00 0.00 11.38 7.70 0.00 46.70 12.60 0.00 56.45 101.74 29.56 30.11 0.00 0.00 0.00 3.15 22.72 11.35 18 E2a_E2c KnownJunction 1 10.45 2.96 295.70 308.29 80.22 21.64 19.17 553.76 540.10 752.51 1853.52 676.42 401.11 3695.82 7031.60 3817.89 1784.66 518.54 1179.23 494.85 652.74 707.43 1524.24 19 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 2.98 1.40 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 3.95 0.00 0.00 0.00 3.67 20 ER2b ExonRegion 1 178.81 108.11 133.25 111.87 221.35 274.56 132.15 203.73 148.79 238.41 86.24 154.41 107.66 188.54 141.69 171.04 108.09 94.28 54.61 85.44 34.96 34.16 28.41 21 E2_Ab KnownBoundary 0 163.36 79.26 202.27 154.23 223.51 200.51 137.79 281.36 177.72 259.81 91.39 106.23 46.91 134.32 79.73 116.38 76.48 34.16 31.15 71.78 22.36 36.37 0.00 22 ER2c ExonRegion 0 176.81 72.03 183.93 129.96 283.98 211.73 143.61 275.37 184.49 273.54 145.73 139.57 70.84 203.63 248.06 172.54 143.81 42.72 44.64 91.24 34.04 37.64 41.77 23 E2_Ac KnownBoundary 1 231.89 131.95 203.78 128.32 454.75 235.38 147.59 299.22 154.98 232.57 112.03 193.26 91.71 191.83 210.52 132.53 156.80 33.87 42.82 71.72 38.49 31.23 14.26 24 ER2d ExonRegion 0 239.00 77.89 263.37 230.80 440.58 463.14 245.73 468.11 416.05 506.01 809.31 639.75 312.08 884.50 1672.47 1125.05 634.80 205.22 269.89 202.14 252.93 346.79 319.31 25 ER2e ExonRegion 1 48.68 9.15 9.19 5.45 16.05 15.59 5.96 19.01 11.12 12.62 46.39 110.40 7.04 37.35 94.29 16.35 36.31 1.85 6.37 20.21 9.92 4.17 8.81 26 ER2f ExonRegion 0 11.85 0.41 0.98 1.91 0.54 0.37 2.91 1.73 3.95 2.52 1.16 21.65 2.81 10.72 11.61 1.19 1.32 0.00 0.00 3.83 0.88 2.08 2.35 27 I2_AR2 ActiveIntronRegion 0 70.51 18.94 27.04 9.63 58.99 14.15 18.56 21.37 23.28 12.79 28.53 97.50 58.53 106.53 54.09 27.37 13.61 3.98 6.40 24.87 2.80 1.76 1.55 28 I2_AR4 ActiveIntronRegion 1 5.22 2.82 8.44 5.32 16.49 3.96 11.64 6.75 3.69 3.95 6.85 63.33 18.58 21.58 11.04 9.16 2.03 0.00 0.98 6.56 0.68 0.64 0.45 29 E3_Aa NovelBoundary 1 23.12 6.05 24.25 8.16 45.25 4.60 15.90 12.20 12.70 13.94 16.74 81.78 72.72 76.52 27.94 26.83 7.67 7.17 8.28 23.46 8.15 0.00 2.99 30 ER3a ExonRegion 1 66.60 9.66 27.83 11.93 122.95 35.76 50.40 24.93 19.32 20.97 53.12 173.90 127.90 211.77 64.51 58.36 29.47 6.77 27.28 22.43 3.05 3.24 6.01