Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C1orf109 Gene 0 6.51 7.72 12.49 9.51 9.88 33.76 16.27 9.29 10.82 14.00 16.14 13.63 7.10 28.03 20.55 21.02 22.25 12.03 10.89 9.29 15.41 9.43 11.60 2 498448 Transcript 0 3.15 1.01 2.49 1.01 1.43 3.64 3.26 2.19 5.52 4.84 3.60 5.75 4.31 5.60 3.85 3.73 4.88 1.71 1.19 1.58 9.57 4.34 4.87 3 488137 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 4.59 4.45 0.00 0.00 0.00 0.00 0.00 8.71 0.00 0.00 4 491981 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 494120 Transcript 0 0.03 0.13 0.02 0.55 1.11 1.72 0.56 0.62 0.82 1.94 0.82 0.99 0.20 0.81 0.14 0.17 1.19 0.08 0.04 0.38 0.76 0.88 0.10 6 477060 Transcript 0 0.00 0.00 0.00 1.80 0.00 2.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 3.26 0.00 3.06 0.00 7 461359 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 358011 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 491797 Transcript 0 4.29 4.93 4.50 0.43 8.28 11.38 11.37 2.89 3.01 4.32 11.07 6.46 7.39 11.50 7.47 6.31 5.38 3.42 1.48 7.49 2.42 0.00 1.97 10 486637 Transcript 0 0.00 6.64 8.93 4.73 20.54 2.50 14.35 0.00 7.78 7.60 7.05 13.20 0.00 29.20 36.22 15.64 21.22 8.25 4.33 2.81 9.27 6.12 12.72 11 464085 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 472584 Transcript 1 3.63 0.00 4.46 1.33 4.16 8.52 4.11 1.97 3.99 1.50 12.27 0.00 0.00 31.31 0.00 15.12 7.76 3.69 9.04 0.00 0.00 4.96 3.41 13 464178 Transcript 0 6.67 20.65 2.90 10.29 12.99 54.91 9.58 12.24 13.66 12.71 7.53 0.00 27.43 36.55 27.81 34.61 13.65 10.03 9.32 0.00 14.02 16.47 4.01 14 ER1a ExonRegion 0 0.32 0.00 0.00 0.00 1.07 2.38 0.99 0.00 0.06 0.00 0.87 0.00 0.00 2.35 1.60 4.16 0.50 0.00 0.00 1.91 5.18 0.83 4.55 15 E1_Ad KnownBoundary 0 3.78 0.00 0.00 0.00 4.24 13.34 8.26 0.00 0.00 0.00 2.68 0.00 0.00 14.95 8.90 12.99 4.77 5.76 0.00 3.00 12.48 3.12 12.98 16 ER1b ExonRegion 0 2.12 0.00 0.00 0.58 2.68 9.17 2.65 0.00 1.24 0.00 1.93 0.00 0.00 8.82 5.80 8.92 3.30 0.00 0.00 2.13 9.13 5.66 8.81 17 E1_Da KnownBoundary 0 0.00 0.00 1.33 2.03 0.00 7.95 0.00 0.00 3.15 0.00 5.11 0.00 0.00 2.94 0.00 3.76 0.00 0.00 0.00 2.94 5.81 8.94 3.93 18 E1a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER1c ExonRegion 0 2.12 0.00 0.00 1.36 2.68 9.34 2.65 0.00 1.24 0.00 2.99 0.00 0.00 9.74 5.80 8.92 3.30 0.00 0.00 2.13 11.02 6.44 8.81 20 ER1d ExonRegion 0 2.12 0.00 0.00 1.36 2.68 11.23 2.65 0.00 2.47 0.00 3.87 0.00 0.00 9.54 4.17 9.10 3.30 0.00 0.00 3.99 12.67 8.33 11.56 21 ER1e ExonRegion 0 0.75 0.00 0.02 0.39 0.15 1.36 0.58 0.83 1.66 1.67 3.82 0.00 0.00 4.18 1.20 2.82 2.41 1.07 1.02 2.84 9.84 1.05 1.03 22 E1_Db NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 1.89 0.00 1.67 0.00 0.00 0.00 2.35 0.00 3.76 0.00 1.91 0.00 0.00 8.53 0.00 3.84 23 E1b_E2a KnownJunction 0 2.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 2.47 0.00 3.85 0.00 0.00 0.00 0.00 4.76 0.00 0.00 24 E1b_E3f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 4.59 4.45 0.00 0.00 0.00 0.00 0.00 8.71 0.00 0.00 25 E1b_E4a KnownJunction 0 0.00 0.00 0.00 1.80 0.00 2.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 3.26 0.00 3.06 0.00 26 E2_Aa NovelBoundary 0 0.00 0.00 0.00 2.06 0.00 0.00 4.15 5.01 1.56 0.00 0.00 0.00 0.00 9.83 0.00 3.67 0.00 5.06 0.00 3.26 10.26 2.63 0.00 27 ER2a ExonRegion 0 1.93 0.84 0.75 0.00 2.98 3.67 0.64 0.17 2.99 5.37 2.06 0.70 0.00 9.93 0.87 4.45 6.28 2.07 2.64 1.76 10.07 1.90 3.20 28 E2_Da KnownBoundary 0 0.00 0.00 0.00 0.00 3.99 11.07 1.72 1.77 2.72 1.24 2.63 6.15 0.00 0.00 0.00 3.16 8.88 1.70 0.00 0.00 14.46 2.51 4.35 29 E2a_E3f KnownJunction 0 0.00 0.00 0.00 0.00 4.07 5.79 0.00 0.00 1.13 7.17 0.00 0.00 0.00 0.00 0.00 0.00 4.39 0.00 0.00 0.00 0.00 0.00 0.00 30 ER2b ExonRegion 0 3.15 1.01 2.49 1.01 1.43 3.64 3.26 2.19 5.52 4.84 3.60 5.75 4.31 5.60 3.85 3.73 4.88 1.71 1.19 1.58 9.57 4.34 4.87 31 E2_Db NovelBoundary 0 16.89 6.05 1.69 0.00 0.00 0.00 12.28 0.00 2.98 9.08 7.21 7.50 0.00 4.65 0.00 0.00 4.39 0.00 0.00 0.00 8.83 3.12 11.35 32 E3_Ad NovelBoundary 0 0.00 6.58 0.00 0.00 16.38 31.40 10.64 0.00 0.00 0.00 2.53 0.00 0.00 12.01 8.90 3.93 26.55 0.00 0.00 3.00 6.30 8.63 16.48 33 ER3a ExonRegion 0 1.59 0.00 0.00 2.90 3.34 16.05 7.61 0.00 1.08 3.73 1.93 0.00 0.00 5.28 8.34 3.34 18.98 0.00 0.00 3.19 4.41 4.43 4.40 34 E3_Ae KnownBoundary 0 20.89 39.14 28.77 29.70 67.40 328.96 89.87 9.00 22.57 25.89 59.28 10.80 6.98 67.16 24.35 78.18 92.01 53.43 69.74 42.82 48.06 41.03 63.08 35 ER3b ExonRegion 0 4.23 0.00 0.00 5.11 7.36 42.18 13.24 1.30 1.85 6.02 7.73 0.00 0.00 15.84 15.23 7.43 23.93 0.46 0.00 8.51 12.67 8.33 11.01 36 ER3c ExonRegion 0 8.04 10.17 8.09 9.27 17.66 99.03 25.68 4.15 6.18 11.01 19.33 0.00 0.00 32.48 27.27 20.80 39.61 9.61 17.20 17.45 17.63 15.42 18.79 37 ER3d ExonRegion 1 8.85 18.67 21.89 17.90 31.87 180.80 53.26 7.78 13.75 22.47 38.92 0.00 0.64 53.74 34.55 42.96 70.97 20.41 42.57 24.18 31.75 29.55 38.44 38 ER3e ExonRegion 1 10.53 25.37 38.79 23.63 52.79 293.03 60.03 15.28 24.39 38.63 48.28 2.56 11.73 53.82 35.34 91.33 69.09 31.45 71.24 32.88 39.42 29.17 53.79 39 E3_Af KnownBoundary 1 16.82 12.63 33.68 12.82 48.05 172.00 26.54 16.51 24.83 30.46 31.64 5.40 13.15 33.43 28.56 117.06 40.02 36.89 88.10 28.06 28.11 13.96 42.34 40 ER3f ExonRegion 0 8.55 3.11 28.42 12.27 6.20 40.77 7.92 11.09 19.90 39.65 34.16 18.03 7.62 41.43 31.66 39.70 64.24 26.28 23.37 24.80 38.04 13.64 13.13 41 E3_Da KnownBoundary 1 0.00 3.09 30.10 24.71 0.00 19.19 5.74 22.14 26.88 51.06 54.54 12.60 25.49 56.63 22.25 17.17 142.22 35.73 13.65 32.02 61.53 29.21 29.02 42 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.50 0.00 0.00 0.00 7.41 0.00 0.00 0.00 2.47 4.45 0.00 0.00 0.00 0.00 2.56 17.42 0.00 0.00 43 ER3g ExonRegion 0 3.82 7.88 25.09 18.20 13.88 37.72 13.88 12.44 19.37 32.00 28.98 17.54 15.66 53.91 42.81 65.94 54.46 37.57 41.71 23.08 26.48 23.47 38.38 44 E3_Db KnownBoundary 0 2.89 2.89 11.24 5.56 18.08 187.28 29.19 8.83 6.25 2.93 4.95 5.85 0.00 21.37 14.59 18.63 11.59 18.41 12.89 9.01 11.49 5.69 12.38 45 E3b_E4a KnownJunction 0 0.00 2.50 0.00 2.00 4.33 13.80 0.00 0.00 1.79 2.26 0.00 0.00 6.82 20.66 4.45 4.27 4.11 4.02 9.22 0.00 3.15 0.00 4.18 46 E3b_E4b KnownJunction 0 0.00 3.35 2.96 5.79 19.27 44.63 19.74 6.65 4.77 12.11 7.05 0.00 0.00 22.19 8.90 36.23 17.48 11.73 13.08 12.40 17.61 9.37 7.94 47 ER3h ExonRegion 0 10.18 15.57 8.02 3.07 14.27 61.06 17.56 4.18 5.32 5.29 11.50 14.45 6.31 31.11 30.02 22.43 18.76 12.10 12.77 12.95 8.04 12.44 15.93 48 E3_Dc NovelBoundary 0 9.56 0.00 0.00 1.80 0.00 2.73 14.71 2.26 2.92 4.65 7.16 0.00 0.00 14.72 9.27 15.21 3.83 2.36 4.52 6.33 5.81 8.57 11.69 49 E3c_E4a KnownJunction 0 3.63 0.00 4.46 1.33 4.16 8.52 4.11 1.97 3.99 1.50 12.27 0.00 0.00 31.31 0.00 15.12 7.76 3.69 9.04 0.00 0.00 4.96 3.41 50 E3c_E4b KnownJunction 0 0.00 6.64 8.93 4.73 20.54 2.50 14.35 0.00 7.78 7.60 7.05 13.20 0.00 29.20 36.22 15.64 21.22 8.25 4.33 2.81 9.27 6.12 12.72 51 ER4a ExonRegion 0 2.65 4.07 9.80 5.79 13.38 39.89 14.23 4.75 6.48 13.48 17.40 6.49 4.69 57.25 21.76 28.24 19.81 18.48 11.95 4.79 17.08 8.85 12.48 52 ER4b ExonRegion 0 10.41 15.49 28.72 14.83 17.34 84.93 38.51 16.85 22.35 40.15 35.82 19.39 4.23 85.65 67.28 37.86 56.61 29.31 30.75 23.11 52.78 17.11 23.13 53 E4_Ac KnownBoundary 0 17.93 19.47 36.96 17.21 11.38 127.48 18.90 19.55 22.42 39.86 38.48 32.41 0.00 127.02 86.53 37.60 89.11 22.22 32.28 14.25 36.08 22.35 20.91 54 E4_Da KnownBoundary 0 21.41 28.94 19.69 7.66 28.95 50.65 35.90 14.17 18.32 17.25 32.53 0.00 6.33 54.74 51.30 44.35 49.09 20.31 14.21 24.93 40.03 5.82 21.77 55 E4a_E5a KnownJunction 0 0.00 0.00 0.00 1.96 0.00 0.00 2.08 0.00 1.79 0.00 2.05 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 2.72 3.12 0.00 56 ER4c ExonRegion 0 16.52 23.81 46.88 19.83 21.15 100.27 34.55 26.21 30.28 49.17 50.19 24.16 0.30 111.44 77.49 42.66 74.64 32.48 24.15 21.83 48.34 20.90 22.83 57 E4_Db KnownBoundary 0 0.00 0.00 5.50 4.13 8.66 23.05 11.26 2.55 5.38 9.99 18.79 0.00 0.00 2.88 6.30 13.07 14.31 5.14 0.00 3.26 12.60 9.37 0.00 58 E4_Dc KnownBoundary 0 10.52 12.04 26.79 13.98 20.29 37.65 42.62 21.07 21.27 37.66 30.80 5.25 35.39 43.97 22.99 35.55 38.90 27.90 27.95 48.77 23.66 11.94 15.54 59 ER4d ExonRegion 0 14.46 24.23 49.53 21.12 31.89 75.34 54.83 29.67 36.44 56.96 57.66 18.40 8.99 94.20 73.01 57.21 65.74 40.80 36.10 48.05 61.70 21.01 19.58 60 ER4e ExonRegion 0 14.02 25.93 47.48 21.98 31.11 77.94 53.62 34.35 38.75 54.76 58.95 17.32 23.45 95.82 67.09 62.41 60.24 46.89 40.61 53.19 63.63 20.84 24.59 61 ER4f ExonRegion 1 9.52 31.46 45.07 26.66 33.45 65.67 50.64 35.22 36.36 56.70 73.09 12.45 24.77 104.81 68.90 64.27 66.12 47.18 52.86 49.33 55.23 24.87 33.95 62 E4_Dd KnownBoundary 0 0.00 18.94 1.83 0.00 12.90 7.15 6.14 5.09 2.84 11.09 17.48 7.65 6.82 7.48 5.19 3.33 8.32 4.97 4.52 6.39 3.15 0.00 0.00 63 E4d_E5a KnownJunction 0 9.71 24.93 31.58 34.79 19.27 74.62 40.72 32.90 28.99 44.62 61.59 6.30 6.17 98.89 34.49 61.35 72.28 44.11 50.73 20.07 44.48 25.23 52.75 64 ER4g ExonRegion 0 4.29 4.93 4.50 0.43 8.28 11.38 11.37 2.89 3.01 4.32 11.07 6.46 7.39 11.50 7.47 6.31 5.38 3.42 1.48 7.49 2.42 0.00 1.97 65 E4_De NovelBoundary 0 7.19 17.37 20.96 10.65 26.99 13.74 4.37 13.68 5.21 7.41 4.84 6.00 6.66 14.01 4.45 11.62 13.65 1.58 9.04 15.21 3.09 3.12 3.16 66 I4 Intron 0 2.68 1.76 2.92 2.03 5.89 7.10 6.89 2.23 2.09 2.74 5.81 8.82 8.14 10.45 5.82 8.13 7.72 2.56 3.39 3.55 1.91 1.53 1.18 67 I4_SR1 SilentIntronRegion 0 2.69 1.77 2.92 2.04 5.91 7.11 6.91 2.24 2.09 2.75 5.82 8.85 8.16 10.47 5.84 8.16 7.74 2.57 3.39 3.56 1.92 1.53 1.18 68 E5_Aa NovelBoundary 0 6.67 0.00 16.47 11.09 11.46 12.04 8.04 15.53 2.98 8.86 22.85 7.65 0.00 19.25 0.00 7.09 22.63 1.62 0.00 11.51 4.70 19.53 12.55 69 ER5a ExonRegion 0 18.28 24.96 41.14 44.60 48.65 99.55 76.07 30.38 36.72 44.94 83.03 35.23 18.90 119.35 65.19 102.04 110.13 50.25 34.27 27.08 71.72 21.21 52.59 70 E5_Da KnownBoundary 0 30.30 31.90 47.10 60.96 72.67 121.01 75.43 39.31 54.46 53.70 88.97 75.77 45.61 158.40 110.14 115.27 124.08 51.82 60.61 27.42 91.43 31.35 66.50 71 ER5b ExonRegion 0 25.20 18.80 57.41 52.56 39.79 82.67 65.65 52.12 48.81 54.80 104.81 61.94 41.60 137.09 128.37 93.46 120.27 55.15 34.29 42.05 71.48 45.20 52.79 72 E5_Db NovelBoundary 0 30.45 24.21 64.60 71.72 54.67 76.26 85.59 65.31 63.66 55.01 77.55 94.83 38.80 163.40 164.29 134.24 101.17 70.60 36.42 34.39 60.67 70.42 54.63 73 E5_Dc NovelBoundary 0 7.56 0.00 9.02 3.46 0.00 5.79 7.68 4.81 8.39 6.02 4.84 6.30 25.97 13.19 0.00 7.86 17.67 7.88 0.00 5.62 0.00 5.88 3.59 74 E5c_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 E5c_E6b KnownJunction 0 6.67 20.65 2.90 10.29 12.99 54.91 9.58 12.24 13.66 12.71 7.53 0.00 27.43 36.55 27.81 34.61 13.65 10.03 9.32 0.00 14.02 16.47 4.01 76 E5c_E6c KnownJunction 0 17.34 15.26 53.90 55.17 71.90 101.53 78.57 57.01 41.46 41.18 92.92 97.53 41.07 162.52 103.84 94.76 92.19 49.45 35.86 45.13 67.52 61.78 42.34 77 ER5c ExonRegion 0 23.21 25.24 56.11 59.59 56.28 95.23 70.08 62.28 54.13 51.57 84.65 87.93 46.25 182.80 117.25 116.94 108.36 67.92 48.99 34.26 71.28 70.41 54.18 78 I5 Intron 0 5.12 3.23 2.90 2.03 7.59 8.72 6.30 4.51 4.46 4.85 14.04 12.67 11.97 14.48 9.33 19.60 15.99 3.91 4.25 4.62 1.84 2.43 3.68 79 I5_SR1 SilentIntronRegion 0 4.84 3.49 2.71 2.32 9.16 9.02 8.18 5.60 4.84 4.68 14.59 13.88 14.45 15.26 9.64 23.11 17.37 4.10 4.74 4.86 2.02 2.38 4.03 80 I5_AR1 ActiveIntronRegion 0 6.02 2.58 3.47 1.29 3.39 8.13 1.25 1.63 3.50 5.41 12.86 9.52 5.42 12.67 8.70 10.36 12.55 3.49 3.03 4.04 1.40 2.64 2.79 81 E6_Aa NovelBoundary 0 3.41 3.35 12.12 10.99 17.06 12.78 14.66 7.64 4.63 1.45 19.22 6.30 13.64 15.36 15.08 31.70 9.54 2.32 0.00 10.99 0.00 0.00 4.01 82 ER6a ExonRegion 0 0.12 0.51 0.07 0.23 0.37 1.07 0.18 2.50 0.34 0.61 1.23 3.97 0.78 0.81 0.56 0.66 0.37 0.31 0.18 1.54 0.31 0.41 0.41 83 E6_Ab KnownBoundary 0 0.00 0.00 0.00 2.06 3.99 5.62 1.85 0.00 3.47 2.82 9.84 6.30 0.00 2.18 0.00 7.18 4.77 0.00 0.00 0.00 0.00 0.00 4.35 84 E6_Ac KnownBoundary 0 3.11 0.00 0.00 1.86 0.00 0.00 1.68 4.35 1.65 4.08 7.00 18.76 0.00 0.00 6.30 3.67 0.00 0.00 0.00 2.94 0.00 0.00 0.00 85 ER6b ExonRegion 0 9.52 18.30 14.40 20.44 26.09 56.39 22.51 26.79 22.85 23.80 31.41 32.47 36.35 68.62 39.89 43.84 41.26 23.10 18.32 13.30 27.00 26.56 27.90 86 ER6c ExonRegion 0 17.33 17.20 49.84 53.14 31.63 113.93 47.10 53.88 48.17 55.33 67.23 65.53 33.63 103.24 69.58 82.92 80.31 38.88 31.99 32.53 44.41 36.14 43.33 87 E6_Da NovelBoundary 0 10.45 0.00 1.42 5.43 12.14 10.79 0.00 0.00 2.66 2.71 7.42 7.65 14.45 6.89 8.90 4.36 0.00 4.77 0.00 2.56 0.00 3.12 0.00 88 E6a_E7a KnownJunction 1 73.94 39.27 86.25 73.72 70.20 202.10 158.28 74.10 75.75 82.87 87.76 205.27 103.89 138.86 101.49 111.85 93.31 53.81 44.99 39.50 41.64 64.30 51.05 89 E7_Aa NovelBoundary 0 6.67 3.16 2.87 7.79 17.57 0.00 9.01 0.00 3.50 1.05 7.32 25.81 6.82 7.00 8.90 6.84 4.77 4.89 0.00 0.00 0.00 0.00 0.00 90 ER7a ExonRegion 1 34.71 25.62 62.20 56.21 46.83 120.04 88.57 56.62 53.16 52.51 45.69 88.41 52.06 94.46 64.99 82.80 68.33 59.83 24.97 24.00 27.85 52.50 44.46 91 E7_Da KnownBoundary 0 30.97 27.03 44.41 49.04 34.30 132.88 85.45 47.19 40.94 23.80 35.32 63.47 42.37 68.34 75.41 93.14 43.85 55.01 25.79 26.46 5.44 35.39 23.22 92 ER7b ExonRegion 0 9.32 11.05 8.58 8.41 9.93 44.32 27.13 6.40 8.47 8.54 5.70 18.73 7.89 12.63 7.17 11.74 7.06 7.66 5.60 4.05 1.74 5.76 4.27 93 E7_Db KnownBoundary 0 13.93 6.05 1.83 0.00 19.61 8.23 0.00 2.34 0.00 1.21 2.68 6.60 0.00 0.00 5.56 3.25 8.23 3.48 0.00 6.07 0.00 0.00 3.84 94 ER7c ExonRegion 0 2.01 3.05 1.76 1.15 0.81 0.80 0.69 1.24 1.12 1.04 0.00 2.94 0.51 0.53 0.73 0.65 0.00 0.00 0.28 0.00 0.67 0.37 0.00