Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SFPQ Gene 0 284.39 431.15 284.48 243.33 505.97 375.15 652.25 385.85 331.91 466.82 659.61 650.15 372.89 789.46 534.50 576.74 694.11 380.17 216.06 410.80 230.77 324.37 241.94 2 357214 Transcript 0 594.37 908.66 656.08 449.30 936.20 648.18 1521.04 758.24 623.36 1141.65 1754.45 1509.79 798.43 2459.88 1348.50 1494.33 2020.31 1018.30 515.97 1086.91 620.64 628.16 540.03 3 470472 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 460428 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 485365 Transcript 0 166.83 463.33 97.71 211.60 535.74 421.54 407.84 401.49 443.40 302.55 264.38 489.31 361.58 231.78 110.37 220.12 185.72 127.00 91.09 184.30 85.43 284.17 157.40 6 490668 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 468598 Transcript 0 348.37 413.61 126.64 246.21 631.53 533.51 484.34 374.00 346.10 283.83 314.67 335.60 202.87 221.48 126.48 194.99 239.89 100.45 87.84 175.22 112.11 267.55 156.83 8 466213 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 466745 Transcript 0 7.04 2.50 9.85 3.50 0.00 0.00 2.21 0.00 4.63 1.45 5.11 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 485454 Transcript 0 0.00 0.63 3.22 9.96 0.00 3.40 0.00 15.26 9.96 11.06 3.22 0.00 4.35 2.36 3.40 0.00 3.06 2.55 1.48 0.00 0.78 0.97 1.36 11 471991 Transcript 0 2.39 1.96 1.64 2.50 2.30 1.88 1.37 3.60 2.04 2.09 2.70 0.67 0.68 1.39 1.90 1.08 2.46 0.32 1.27 0.73 0.63 3.98 1.13 12 ER1a ExonRegion 1 45.50 91.96 117.03 42.33 54.66 153.17 182.55 155.44 127.30 356.78 646.01 186.00 196.53 961.08 568.66 625.06 774.83 556.27 203.52 326.92 361.26 164.36 279.58 13 E1a_E2a KnownJunction 1 217.00 493.14 285.44 176.20 605.43 427.03 999.98 466.35 369.64 843.63 1497.43 915.30 297.71 2079.83 544.29 1110.39 1570.92 785.21 316.53 642.05 573.91 452.70 377.56 14 ER2a ExonRegion 0 371.39 704.66 594.14 413.67 828.48 610.12 1407.93 807.74 658.78 1267.47 2066.40 1478.94 763.28 2577.99 1084.53 1769.17 2354.27 981.46 604.73 968.97 687.59 832.90 629.13 15 E2a_E3a KnownJunction 0 626.63 866.16 881.34 607.95 1025.98 661.32 1627.53 1067.10 914.86 1548.94 2455.41 2320.36 1079.47 3213.62 1448.42 1803.12 2755.02 1230.13 685.10 1165.40 900.71 884.95 674.03 16 ER3a ExonRegion 0 703.28 1062.32 920.08 678.68 1173.94 885.40 1942.48 1033.67 884.37 1526.54 2561.56 2292.12 1306.33 3069.47 1589.33 2292.91 2902.79 1632.54 801.51 1576.99 901.27 947.64 763.95 17 E3a_E4a KnownJunction 0 1165.10 1332.46 1028.97 841.12 1814.52 1197.32 2740.38 1154.55 954.30 1676.75 2345.80 2332.21 1598.43 3929.56 2364.06 2238.56 3005.14 1411.11 730.56 1876.23 818.67 798.55 833.14 18 E4_Ab NovelBoundary 0 685.53 781.77 900.68 596.93 1138.88 739.69 1897.41 999.74 716.14 1310.73 1465.95 1466.43 903.51 2505.99 1200.57 1360.16 1900.04 1052.67 579.22 1371.73 600.60 623.54 484.52 19 ER4a ExonRegion 0 935.18 1113.28 1089.60 788.77 1530.93 1047.19 2344.87 1235.15 947.83 1675.34 2336.78 2205.00 1442.42 3768.85 1920.34 2109.91 2883.33 1516.08 732.63 1787.76 828.93 819.34 778.80 20 ER4b ExonRegion 0 1178.57 1319.36 1045.11 820.21 1482.33 1049.54 2275.21 1192.13 926.34 1648.16 2627.62 2421.60 1797.21 3124.59 1619.40 2306.80 2867.61 1525.90 919.90 1762.12 892.79 943.89 712.02 21 E4a_E5a KnownJunction 0 1282.97 1566.56 1139.58 1028.24 1635.23 1151.16 3156.04 1253.87 1005.34 1712.91 2864.99 2545.28 1751.67 3226.34 2006.06 3089.10 2937.44 1650.34 1224.88 1870.03 833.93 1318.97 981.59 22 ER5a ExonRegion 0 1004.59 1221.07 1255.28 969.99 2128.41 1206.97 2933.41 1291.08 1031.94 1707.78 2925.48 3091.63 2399.46 3586.54 2213.71 2543.75 3003.51 1436.83 1042.99 1743.20 748.55 1036.13 895.06 23 E5a_E6a KnownJunction 0 1534.86 1516.11 1641.87 1150.50 1884.38 1191.19 2883.78 1455.46 1176.41 1809.72 2763.17 3642.59 2153.59 3873.47 2727.74 2684.00 3426.64 1592.60 1183.75 1986.74 734.97 1029.82 940.19 24 ER6a ExonRegion 0 1101.44 1126.77 1422.92 932.07 1591.22 1017.61 2348.15 1260.57 1049.64 1664.13 2732.32 3522.96 1809.41 3133.88 2102.11 2154.16 3111.04 1480.03 902.06 1692.38 780.99 801.81 838.46 25 E6a_E7a KnownJunction 0 1622.44 1311.61 1485.37 1000.84 2099.24 1097.55 3005.80 1299.50 1039.20 1691.20 2297.16 3661.04 1796.15 3441.54 2777.06 2060.57 3084.15 1333.31 773.39 1949.99 767.71 1000.13 780.13 26 ER7a ExonRegion 0 1449.68 1462.23 1441.64 1012.04 2024.94 1133.92 2939.25 1337.19 1058.17 1669.45 2381.17 3527.72 2027.63 3327.26 2579.04 2657.14 3022.48 1708.19 1027.12 1932.13 801.57 1125.36 1001.75 27 E7_Ab KnownBoundary 1 2494.44 2318.27 1622.33 1145.91 3395.33 1739.51 4884.70 1392.78 1096.08 1700.09 2447.30 4912.30 3222.19 4145.64 3884.06 3281.19 3057.31 1907.64 1446.72 2232.18 883.05 1305.74 1211.64 28 ER7b ExonRegion 1 1098.13 1259.08 1392.45 905.98 1996.42 1257.32 2962.14 1128.93 931.56 1477.23 2012.62 3715.25 1861.74 3238.26 2781.80 2142.86 2496.72 1492.96 908.20 1675.63 821.98 915.63 811.62 29 E7a_E8a KnownJunction 1 1334.46 1280.63 1231.42 809.32 2394.40 1212.43 2940.40 1031.00 837.66 1401.84 2090.74 3751.67 1044.90 3277.20 2462.83 1931.54 2470.87 1549.24 842.66 1596.01 883.85 772.46 800.11 30 ER8a ExonRegion 1 823.63 978.86 992.35 676.85 1319.47 766.86 1912.21 918.37 818.78 1371.32 2094.16 3095.30 767.83 2629.15 2194.18 1917.87 2247.51 1653.51 695.25 1490.83 845.50 718.47 721.46 31 E8a_E9a KnownJunction 1 891.71 1147.03 903.81 660.19 1033.11 677.91 1899.79 847.52 767.73 1237.99 2167.65 3407.46 824.13 2582.80 2294.34 2154.90 2073.30 1909.05 742.89 1692.14 812.99 793.95 833.40 32 ER9a ExonRegion 1 746.00 1290.32 1025.35 639.68 894.95 587.42 1557.01 890.37 740.09 1351.23 1770.74 2151.92 421.22 2424.04 2071.11 2000.87 2037.03 1628.94 715.43 1315.88 742.98 791.52 690.54 33 E9_Da NovelBoundary 0 34.01 74.92 47.57 49.44 125.89 123.51 227.61 90.90 200.23 111.02 250.91 176.01 85.55 309.38 65.02 222.59 215.71 242.71 55.44 191.94 218.07 139.67 208.71 34 E9a_E10a KnownJunction 1 1023.29 1918.08 680.61 272.79 855.52 503.29 1677.30 519.26 425.92 919.86 1360.24 1260.41 209.40 1943.09 2004.33 1059.47 1445.91 831.64 408.86 1066.78 398.83 369.91 333.68 35 E9a_E12e KnownJunction 1 199.74 8.88 47.43 141.77 202.12 124.53 122.82 142.94 86.25 158.81 108.13 133.69 26.46 92.35 179.49 125.27 76.20 16.17 39.06 0.00 105.21 86.77 63.08 36 I9 Intron 1 56.26 131.26 43.82 86.76 165.32 172.02 265.13 126.48 202.78 123.51 247.18 440.91 282.91 251.54 65.87 195.81 250.07 91.39 52.34 171.65 107.99 217.96 142.42 37 I9_AR1 ActiveIntronRegion 1 56.30 131.36 43.86 86.84 165.46 172.17 265.36 126.58 202.95 123.61 247.38 441.27 283.15 251.74 65.92 195.97 250.28 91.46 52.38 171.79 108.07 218.14 142.54 38 E10_Aa NovelBoundary 1 127.65 294.09 59.99 88.87 263.41 251.79 377.81 124.45 228.41 123.62 243.96 522.17 357.12 324.09 74.54 195.85 307.34 134.14 92.33 225.44 337.00 175.50 141.96 39 ER10a ExonRegion 0 261.93 595.84 307.51 222.22 536.31 348.81 766.31 384.92 327.21 459.53 520.44 597.78 292.29 595.38 612.51 440.39 490.59 220.31 160.31 371.12 114.60 383.11 190.42 40 E10_Da NovelBoundary 0 270.71 645.61 162.44 313.78 451.36 916.01 715.97 432.72 508.53 295.59 433.90 510.02 443.48 277.48 96.55 247.71 280.13 107.24 148.80 341.51 138.38 457.05 260.53 41 I10 Intron 0 117.31 346.83 119.84 202.86 401.35 342.54 363.40 360.20 429.19 275.65 274.98 500.81 318.96 268.05 99.95 191.51 236.32 98.33 72.09 237.91 82.41 330.97 149.78 42 I10_AR1 ActiveIntronRegion 0 117.47 347.35 120.01 203.17 401.94 343.04 363.94 360.74 429.83 276.06 275.39 501.56 319.44 268.45 100.08 191.79 236.67 98.47 72.20 238.27 82.54 331.46 149.99 43 E11_Aa NovelBoundary 1 311.31 1107.37 116.17 213.83 991.77 687.10 839.44 466.52 530.38 349.12 212.26 670.72 607.75 337.10 128.19 156.28 146.14 38.10 69.55 234.70 32.93 375.97 152.80 44 ER11a ExonRegion 1 166.83 463.33 97.71 211.60 535.74 421.54 407.84 401.49 443.40 302.55 264.38 489.31 361.58 231.78 110.37 220.12 185.72 127.00 91.09 184.30 85.43 284.17 157.40 45 E11_Ab KnownBoundary 0 216.48 379.93 141.75 246.36 674.96 598.58 516.13 443.48 476.64 330.75 343.72 530.87 323.52 350.99 115.46 313.42 293.59 273.34 129.60 291.27 240.13 268.75 281.78 46 ER11b ExonRegion 0 177.68 323.37 143.18 231.46 490.01 435.53 408.15 386.64 436.31 286.90 381.10 378.65 221.71 328.31 143.12 314.62 314.52 251.69 103.03 254.95 257.02 252.86 238.91 47 E11_Da NovelBoundary 0 216.26 348.42 95.24 224.45 367.91 479.21 426.48 275.57 394.15 285.52 304.76 320.65 255.02 351.76 97.53 253.18 226.65 251.46 74.73 220.32 243.40 168.70 289.21 48 E11a_E12e KnownJunction 0 10.30 27.03 27.08 11.69 46.10 5.05 23.98 87.69 85.10 22.73 22.11 18.31 0.00 43.91 51.18 12.13 22.91 38.92 3.76 56.95 0.00 10.90 0.00 49 I11 Intron 0 207.50 306.05 93.70 221.99 483.36 474.89 417.15 331.78 353.60 255.08 358.23 327.10 223.00 288.85 100.83 253.57 269.23 144.17 88.71 221.69 183.15 264.68 205.82 50 I11_AR1 ActiveIntronRegion 1 208.34 307.29 94.08 222.89 485.31 476.81 418.83 333.13 355.03 256.12 359.69 328.43 223.92 290.00 101.22 254.56 270.31 144.76 89.07 222.59 183.89 265.74 206.66 51 E12_Aa NovelBoundary 0 409.41 457.94 199.58 378.67 1227.00 808.17 924.55 596.52 602.71 440.35 477.91 399.13 379.52 364.47 129.55 316.58 322.02 135.80 127.34 278.68 128.25 463.05 288.78 52 ER12a ExonRegion 0 348.37 413.61 126.64 246.21 631.53 533.51 484.34 374.00 346.10 283.83 314.67 335.60 202.87 221.48 126.48 194.99 239.89 100.45 87.84 175.22 112.11 267.55 156.83 53 E12_Ab KnownBoundary 0 366.58 128.73 5.14 12.39 69.52 16.41 13.03 12.90 15.31 14.02 21.37 16.51 12.17 5.83 5.93 7.95 17.86 19.03 3.48 3.13 8.03 5.51 3.93 54 ER12b ExonRegion 0 107.24 21.84 0.00 0.08 1.94 2.65 0.48 0.00 0.18 0.00 0.00 1.63 0.00 0.00 0.00 0.06 0.00 0.00 0.32 0.11 0.00 0.75 0.00 55 E12_Ac KnownBoundary 0 38.67 34.07 14.96 10.29 33.79 9.03 5.79 11.62 20.37 7.41 11.42 41.56 44.80 2.06 0.00 17.00 8.98 4.31 7.72 3.13 3.03 2.88 8.19 56 ER12c ExonRegion 0 3.22 2.32 3.11 3.13 1.21 0.65 0.99 4.20 3.30 2.21 2.86 3.43 0.00 0.62 0.06 1.36 1.11 1.91 1.01 1.22 0.26 1.20 0.69 57 E12_Da KnownBoundary 0 70.98 26.38 7.36 10.62 47.37 7.10 8.52 18.03 17.10 14.00 52.91 52.07 0.00 2.06 0.00 11.54 4.77 12.60 4.42 0.00 8.59 8.63 8.19 58 E12a_E12e KnownJunction 0 7.04 2.50 9.85 3.50 0.00 0.00 2.21 0.00 4.63 1.45 5.11 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 ER12d ExonRegion 0 50.60 63.04 6.84 11.91 28.90 31.10 27.99 15.64 5.97 6.39 1.19 4.81 5.09 3.09 5.96 3.11 1.20 1.62 2.26 2.33 0.62 7.59 1.90 60 E12_Ad KnownBoundary 0 26.97 23.22 118.62 213.03 117.91 67.29 53.08 250.55 115.86 117.82 26.27 63.62 98.69 37.85 78.99 51.95 26.18 17.78 26.07 41.87 5.00 135.63 41.40 61 ER12e ExonRegion 0 3.09 6.24 124.96 196.64 23.15 19.75 11.25 254.64 165.65 147.55 54.57 44.46 61.77 30.97 39.63 30.76 29.71 15.10 7.96 31.51 27.55 70.88 23.38 62 E12_Ae KnownBoundary 0 23.19 50.98 188.96 251.32 80.65 47.53 72.25 357.80 223.15 201.60 74.76 51.32 29.22 21.43 20.40 22.99 53.11 30.43 3.95 34.26 85.50 12.43 23.22 63 ER12f ExonRegion 0 416.37 301.01 291.48 511.78 438.82 282.72 262.76 736.36 489.55 441.75 332.83 149.41 99.59 213.76 352.84 263.25 237.24 103.24 249.88 149.89 172.83 491.40 133.21 64 E12_Db NovelBoundary 0 152.84 32.43 50.86 30.90 163.24 29.87 106.03 51.75 36.11 30.65 16.95 31.66 26.13 14.89 24.72 20.34 20.76 4.23 4.42 5.88 5.50 16.78 8.37 65 E12b_E13b KnownJunction 1 888.31 645.94 360.28 627.49 634.13 441.39 451.92 865.02 560.09 499.74 425.63 223.42 173.53 252.52 503.62 307.95 305.38 83.11 374.32 215.78 160.81 803.14 172.35 66 ER13a ExonRegion 0 2.39 1.96 1.64 2.50 2.30 1.88 1.37 3.60 2.04 2.09 2.70 0.67 0.68 1.39 1.90 1.08 2.46 0.32 1.27 0.73 0.63 3.98 1.13 67 E13_Ab KnownBoundary 0 57.86 22.43 11.80 4.33 28.44 5.62 49.11 3.74 2.92 0.00 10.21 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 2.78 0.00 7.85 68 ER13b ExonRegion 0 330.39 252.14 220.92 333.29 246.00 182.92 155.60 502.09 370.40 338.55 195.75 122.36 111.45 95.64 164.39 102.61 153.74 40.77 81.27 72.45 108.45 272.19 57.26 69 E13_Da KnownBoundary 0 103.13 30.32 50.29 54.31 35.99 15.67 41.69 69.33 27.75 27.37 12.21 0.00 19.32 21.54 28.56 44.69 7.48 26.07 3.67 3.26 8.15 8.94 23.65 70 E13a_E14a KnownJunction 1 275.46 239.56 161.02 195.75 202.21 112.95 75.56 249.24 209.17 203.34 106.34 141.20 155.35 76.52 118.67 34.52 53.30 23.38 8.19 54.90 119.11 95.10 52.16 71 E13a_E14b KnownJunction 1 76.68 84.06 52.30 71.89 44.31 41.00 24.02 114.35 84.03 69.79 41.69 100.23 40.26 52.56 30.78 55.88 36.56 23.84 0.00 14.00 37.99 56.82 20.57 72 ER13c ExonRegion 0 0.00 0.63 3.22 9.96 0.00 3.40 0.00 15.26 9.96 11.06 3.22 0.00 4.35 2.36 3.40 0.00 3.06 2.55 1.48 0.00 0.78 0.97 1.36 73 E13_Db NovelBoundary 0 121.73 48.02 107.54 98.29 128.35 33.05 81.26 80.67 65.05 58.72 31.96 24.61 32.47 26.66 58.59 28.03 35.72 42.41 43.77 8.82 27.12 27.13 41.23 74 ER14a ExonRegion 0 218.53 175.40 133.26 181.26 151.85 98.57 87.05 236.80 198.54 186.95 99.06 128.80 124.29 90.14 101.54 37.15 71.79 24.48 3.19 41.49 103.02 90.11 43.32 75 ER14b ExonRegion 0 153.48 79.76 108.26 156.43 89.15 85.68 67.52 207.26 157.05 140.15 123.62 70.03 49.32 84.24 111.36 41.90 101.46 30.17 25.24 58.45 66.69 58.20 37.40 76 ER14c ExonRegion 0 12.70 3.05 2.45 1.36 18.73 14.67 7.94 7.78 4.94 1.72 4.83 4.33 0.00 8.12 2.90 2.97 1.65 1.85 0.00 4.26 3.31 5.21 5.87 77 IG5_SR2 SilentIntergenicRegion 0 3.88 5.23 0.00 0.00 16.85 31.07 12.43 0.00 0.00 0.00 0.00 3.85 0.00 0.00 3.81 2.70 8.86 3.46 2.77 5.71 0.00 1.85 0.00 78 IG5_AR1 ActiveIntergenicRegion 0 1.59 7.12 0.92 0.00 12.04 26.13 18.54 4.32 1.85 6.88 0.00 3.25 0.00 0.00 0.73 1.49 6.60 0.46 3.19 4.79 0.00 1.56 0.00