Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DLGAP3 Gene 0 3.66 8.63 25.62 10.42 10.74 27.54 14.53 60.91 37.27 56.59 0.40 0.23 0.25 1.24 2.21 0.76 3.81 34.78 24.59 23.19 0.08 0.91 0.64 2 373347 Transcript 0 0.00 2.48 2.18 0.38 0.51 1.39 1.86 5.77 9.62 7.15 0.00 0.00 0.00 0.25 0.00 0.00 0.00 4.77 3.13 4.40 0.00 0.00 0.00 3 495979 Transcript 0 0.00 0.43 0.00 0.00 0.56 0.00 2.00 1.73 1.48 1.04 0.00 0.00 0.00 1.38 0.00 0.00 0.00 0.58 2.01 3.73 0.00 0.00 0.00 4 235180 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 0.00 2.12 0.69 0.77 1.01 2.77 1.90 0.78 3.06 2.93 0.00 0.00 0.00 0.51 0.00 0.00 0.00 2.33 2.22 2.41 0.00 0.00 0.00 6 E1a_E3a KnownJunction 0 0.00 2.83 3.67 0.00 0.00 0.00 1.81 10.76 16.17 11.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.21 4.05 6.39 0.00 0.00 0.00 7 E2_Aa NovelBoundary 0 0.00 3.22 0.00 0.00 0.00 0.00 4.20 0.00 0.00 2.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.18 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.86 0.00 0.00 1.13 0.00 0.08 1.09 1.16 0.41 0.00 0.00 0.00 0.28 0.00 0.00 0.00 1.16 4.03 2.16 0.00 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 3.93 2.38 1.79 1.67 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 5.31 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 0.29 5.43 5.35 0.45 3.93 4.39 16.76 21.53 27.46 0.00 0.00 0.00 1.00 1.19 0.00 4.10 28.14 22.60 18.64 0.00 0.00 0.00 11 E3a_E4a KnownJunction 0 0.00 0.00 6.74 8.29 3.82 7.44 12.32 27.81 26.45 47.25 0.00 0.00 0.00 2.47 0.00 0.00 9.35 38.18 59.20 17.58 0.00 0.00 0.00 12 ER4a ExonRegion 0 2.77 0.00 10.86 6.24 4.22 12.84 9.96 24.17 36.70 36.66 0.00 0.00 0.00 0.37 0.11 0.00 5.71 28.04 30.38 18.09 0.00 0.00 0.00 13 E4_Ab KnownBoundary 0 7.56 2.89 14.55 5.89 12.56 22.66 12.01 26.29 44.53 38.25 0.00 0.00 0.00 0.00 0.00 0.00 9.35 20.27 13.08 20.90 0.00 0.00 0.00 14 ER4b ExonRegion 0 1.16 1.43 6.33 4.86 3.33 7.24 9.94 15.98 24.01 29.86 0.00 0.00 0.00 0.77 1.42 0.00 3.26 18.59 23.15 22.47 0.00 0.00 0.00 15 E4_Da KnownBoundary 0 3.56 0.00 1.51 4.76 3.48 8.40 10.02 4.07 15.08 22.13 0.00 0.00 0.00 2.47 0.00 0.00 0.00 10.45 3.76 28.63 0.00 0.00 0.00 16 ER4c ExonRegion 0 1.84 6.42 17.26 6.77 9.41 17.79 16.22 40.29 30.35 36.76 0.21 0.00 0.00 0.95 2.14 0.85 2.84 37.00 29.67 20.90 0.00 0.36 0.81 17 E4b_E5a KnownJunction 0 3.26 15.85 44.03 12.62 7.39 12.83 26.10 68.10 49.19 54.21 0.00 0.00 0.00 0.00 11.62 0.00 0.00 57.95 59.67 42.95 0.00 0.00 3.41 18 I4 Intron 0 0.80 2.94 1.85 1.41 4.48 2.34 6.32 20.14 9.89 7.19 0.00 0.00 0.15 0.32 0.28 0.22 0.93 8.79 8.14 9.28 0.00 0.12 0.06 19 I4_SR1 SilentIntronRegion 0 0.58 2.55 1.18 1.24 4.31 1.52 5.36 18.19 8.07 6.87 0.00 0.00 0.24 0.20 0.00 0.18 0.81 8.77 8.96 9.45 0.00 0.19 0.00 20 I4_AR1 ActiveIntronRegion 0 0.96 4.63 1.90 1.14 6.64 3.83 10.11 22.51 10.45 8.76 0.00 0.00 0.00 0.91 0.73 0.00 1.50 12.85 5.22 12.42 0.00 0.00 0.00 21 I4_SR2 SilentIntronRegion 0 1.22 3.07 3.42 1.95 3.85 3.59 6.78 23.64 13.93 7.24 0.00 0.00 0.00 0.31 0.71 0.43 0.95 6.93 7.62 7.40 0.00 0.00 0.21 22 E5_Aa NovelBoundary 0 3.41 8.09 4.64 7.23 0.00 0.00 2.21 42.59 20.66 4.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.67 4.05 0.00 0.00 0.00 3.76 23 ER5a ExonRegion 0 4.98 9.66 36.51 9.63 14.16 30.20 19.94 74.37 59.86 65.71 0.05 0.00 1.68 0.00 2.00 0.00 3.85 46.83 40.33 33.24 0.00 0.00 1.58 24 E5a_E6a KnownJunction 0 10.00 8.49 54.43 20.54 34.30 48.15 22.39 115.87 69.70 89.07 0.00 0.00 6.66 0.00 5.56 0.00 8.70 72.13 36.80 34.90 0.00 0.00 0.00 25 ER6a ExonRegion 0 2.55 4.76 54.35 12.62 10.26 18.16 7.49 101.55 71.21 80.82 0.00 0.00 0.64 0.87 1.07 0.00 7.69 42.83 30.85 46.28 0.00 0.00 0.00 26 E6a_E7a KnownJunction 0 0.00 8.88 41.01 21.28 3.99 4.88 12.76 118.99 82.72 100.28 0.00 0.00 0.00 4.59 4.45 0.00 12.62 64.13 85.27 44.23 0.00 0.00 0.00 27 ER7a ExonRegion 0 1.44 9.36 36.64 10.93 6.48 16.44 12.61 75.26 50.52 64.39 0.00 0.00 0.92 0.57 0.31 1.42 6.65 28.78 30.26 31.46 0.00 0.00 0.00 28 E7a_E8a KnownJunction 0 14.67 15.00 26.05 12.82 12.65 78.70 35.90 68.31 51.48 40.64 0.00 0.00 0.00 0.00 0.00 3.59 8.23 85.52 66.83 54.52 0.00 0.00 0.00 29 ER8a ExonRegion 0 1.77 6.96 14.99 2.54 7.85 20.36 12.40 29.55 19.47 33.65 0.00 0.00 0.00 1.06 1.48 0.97 2.95 22.69 14.76 17.83 0.00 0.09 0.00 30 E8a_E9a KnownJunction 0 0.00 9.27 29.30 0.00 3.74 23.74 15.32 52.66 36.75 48.67 0.00 0.00 0.00 0.00 4.45 0.00 0.00 35.48 13.27 20.07 0.00 5.51 0.00 31 ER9a ExonRegion 0 0.00 13.41 31.20 6.40 23.52 55.65 16.26 120.97 50.17 71.00 0.00 0.00 0.00 0.57 3.10 1.42 3.19 57.09 25.37 44.83 0.00 1.41 1.74 32 E9a_E10a KnownJunction 0 0.00 8.68 59.02 17.25 7.30 47.13 19.25 147.62 56.08 95.39 0.00 0.00 0.00 0.00 0.00 3.50 8.32 83.78 36.80 47.75 0.00 2.88 0.00 33 ER10a ExonRegion 0 2.81 12.65 34.54 15.98 15.75 40.12 16.89 93.11 46.84 79.22 0.20 0.00 0.00 0.60 1.54 0.06 2.50 46.65 22.99 26.46 0.70 1.22 0.93 34 E10a_E11a KnownJunction 0 3.78 45.39 77.23 62.13 19.19 30.15 16.91 213.91 117.42 171.54 0.00 0.00 0.00 0.00 4.45 0.00 4.11 96.30 35.39 75.17 0.00 0.00 0.00 35 ER11a ExonRegion 0 23.53 17.31 77.29 58.41 22.60 50.51 24.87 215.25 118.25 198.38 0.00 2.40 0.00 2.49 3.06 1.65 10.48 73.07 49.06 67.37 0.00 2.06 1.53 36 E11a_E12a KnownJunction 0 38.82 10.92 72.41 57.54 20.29 57.98 27.60 205.66 133.22 170.01 0.00 0.00 0.00 2.30 0.00 0.00 9.07 68.73 67.86 57.91 0.00 2.51 8.71 37 ER12a ExonRegion 0 11.21 21.59 78.53 49.78 21.85 97.82 30.76 185.27 95.02 176.22 0.00 0.00 0.00 2.36 1.21 0.00 5.75 92.14 38.16 52.08 0.00 1.68 1.10 38 E12a_E13a KnownJunction 0 17.86 14.73 46.86 30.73 34.13 97.16 30.03 133.08 66.12 123.94 0.00 0.00 0.00 0.00 4.45 0.00 13.84 47.34 52.90 47.36 0.00 5.02 0.00 39 ER13a ExonRegion 0 6.15 10.83 25.61 7.63 12.36 35.02 14.46 57.64 29.72 56.97 1.48 0.81 0.45 2.64 4.62 1.58 4.96 27.21 19.81 14.74 0.00 2.45 0.69 40 IG50 Intergenic 0 1.81 10.96 7.00 3.47 23.44 16.40 16.20 22.23 18.13 15.55 0.10 0.09 0.00 0.19 0.05 0.00 0.09 5.95 12.71 13.01 0.06 0.32 0.08 41 IG50_AR2 ActiveIntergenicRegion 0 0.61 8.39 6.91 3.22 16.29 15.62 13.81 26.63 25.25 25.93 0.00 0.26 0.00 0.33 0.00 0.00 0.00 9.52 19.79 17.57 0.00 0.18 0.00 42 IG50_SR2 SilentIntergenicRegion 0 1.57 10.01 7.22 2.23 19.49 21.91 21.06 16.75 11.28 8.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 8.58 12.64 0.00 0.31 0.54 43 IG50_AR1 ActiveIntergenicRegion 0 5.42 26.47 13.25 8.23 56.81 31.12 32.07 37.10 25.14 18.60 0.00 0.00 0.00 0.29 0.22 0.00 0.35 8.24 16.99 19.30 0.00 0.67 0.00