Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	SNRNP40	Gene	0	71.45	43.99	49.52	57.39	82.13	57.39	85.94	67.05	53.97	109.46	178.68	101.42	62.19	203.99	177.72	176.39	165.35	46.90	44.92	40.86	56.02	63.07	52.97
2	463988	Transcript	0	9.81	6.31	3.23	4.74	8.06	14.29	25.83	7.09	5.53	7.37	24.53	7.63	4.78	17.81	30.40	41.07	25.38	9.11	5.49	3.90	5.51	6.51	12.78
3	446633	Transcript	0	12.84	4.82	3.76	3.10	19.77	7.30	13.93	5.68	3.78	4.74	4.96	16.68	8.86	20.64	12.31	17.29	15.41	0.28	3.19	14.24	4.31	2.73	9.95
4	263694	Transcript	0	11.84	3.55	5.27	5.94	12.57	2.60	15.59	4.41	5.23	13.07	4.30	4.96	10.29	14.54	19.49	13.07	5.77	0.25	3.25	1.92	0.00	4.61	0.00
5	474025	Transcript	0	8.50	3.67	2.96	12.81	14.68	9.76	18.64	10.48	20.81	15.00	13.56	29.07	18.46	19.01	9.03	24.61	14.98	5.73	9.63	7.08	5.23	10.94	4.96
6	489853	Transcript	1	8.29	5.76	2.65	15.62	7.35	6.40	14.05	7.63	8.50	10.87	7.88	16.74	22.25	7.33	5.63	7.10	10.44	6.40	3.00	6.10	4.03	7.04	8.03
7	373720	Transcript	1	32.56	16.04	14.15	30.34	35.78	12.89	44.72	20.88	36.36	37.93	26.26	34.13	51.37	22.60	26.40	38.32	32.95	15.53	13.00	13.37	15.81	18.96	10.22
8	486941	Transcript	0	113.25	34.63	23.33	72.25	53.84	24.17	50.80	54.70	48.25	67.63	29.17	42.64	35.38	23.63	30.87	38.48	33.79	16.26	7.69	19.81	10.31	32.53	22.86
9	491106	Transcript	0	5.55	0.00	4.71	3.66	20.41	7.67	10.14	5.34	2.82	4.53	3.08	9.37	1.47	10.05	26.16	11.51	6.26	0.00	0.00	1.06	0.00	0.07	0.28
10	ER1a	ExonRegion	1	14.60	8.13	2.45	2.18	7.76	22.01	33.50	4.15	3.46	10.21	44.07	3.03	0.00	29.56	55.41	77.87	34.00	15.15	9.24	3.83	8.59	11.04	22.32
11	ER1b	ExonRegion	1	67.02	24.40	7.76	5.45	36.57	67.85	95.33	12.10	8.65	26.38	119.84	4.33	0.00	103.94	159.57	250.65	88.02	54.82	33.98	12.77	26.44	49.31	74.39
12	ER1c	ExonRegion	1	139.42	53.32	35.99	25.89	76.30	127.04	140.16	53.55	50.38	112.97	269.78	7.71	13.57	202.24	224.16	429.28	249.81	102.18	94.92	56.68	89.22	100.87	128.16
13	E1a_E2a	KnownJunction	1	37.64	15.92	47.63	31.06	11.88	44.46	17.53	54.14	56.94	154.59	513.29	35.11	46.75	155.75	127.70	99.46	379.34	25.08	13.18	29.53	146.84	34.72	28.08
14	ER2a	ExonRegion	1	30.87	32.62	67.48	67.78	70.70	65.11	59.55	108.13	96.53	222.61	451.50	91.52	63.24	471.88	479.84	657.98	398.44	168.46	145.38	125.53	150.11	186.64	201.61
15	E2_Da	KnownBoundary	0	3.48	2.70	4.64	3.53	0.00	11.02	12.54	14.13	2.95	1.67	0.00	0.00	0.00	7.06	4.70	4.36	12.25	7.79	0.00	5.88	0.00	0.00	15.02
16	E2a_E3a	KnownJunction	0	54.60	49.00	69.81	69.62	183.19	137.65	122.90	106.67	118.29	217.85	397.36	118.99	104.21	359.71	378.52	334.27	319.96	148.90	64.94	103.23	98.84	109.98	79.30
17	ER2b	ExonRegion	0	5.01	4.48	4.01	7.29	8.36	6.57	18.16	10.04	7.61	4.53	4.99	12.23	9.57	6.06	5.39	4.28	16.77	3.06	1.73	3.98	2.43	1.98	3.25
18	E2_Db	NovelBoundary	0	7.11	6.38	4.70	13.98	17.74	5.05	37.27	7.68	3.53	10.05	7.05	7.20	14.77	2.35	5.19	4.36	24.22	1.58	0.00	3.26	0.00	2.33	3.76
19	I2_AR9	ActiveIntronRegion	0	8.47	0.00	1.23	1.36	2.68	14.67	21.18	1.73	2.47	0.00	3.87	4.33	4.69	8.12	11.36	5.94	16.50	0.00	9.56	4.26	4.41	2.08	5.87
20	I2_AR10	ActiveIntronRegion	0	8.47	0.00	1.23	1.36	2.68	14.41	21.18	1.73	2.47	0.00	3.87	4.33	4.69	7.89	8.70	5.94	14.15	0.00	8.65	4.26	4.41	2.08	5.87
21	ER3a	ExonRegion	0	52.94	66.18	103.45	90.92	195.87	282.03	285.30	132.93	125.29	267.19	540.02	175.99	111.76	490.57	443.21	433.11	450.36	139.60	97.66	110.52	148.05	145.34	108.50
22	E3_Da	NovelBoundary	0	0.00	0.00	6.12	14.92	8.66	0.00	15.15	13.68	13.02	10.91	11.95	18.61	26.78	7.18	13.35	8.12	17.77	9.33	4.80	11.57	3.09	10.96	15.11
23	E3a_E4a	KnownJunction	0	78.16	103.67	131.31	125.53	111.97	202.10	316.78	135.63	151.71	347.81	699.97	211.72	133.43	595.62	520.68	513.11	511.08	124.86	71.25	154.62	154.94	221.79	128.30
24	ER4a	ExonRegion	0	152.36	102.94	138.56	132.31	159.74	146.52	198.08	176.92	153.48	326.81	591.35	252.20	142.45	639.13	547.64	461.43	555.05	115.89	124.94	141.18	180.33	180.25	128.31
25	E4_Da	NovelBoundary	0	3.33	0.00	8.99	24.01	0.00	2.56	7.86	11.09	11.08	16.01	14.85	18.31	0.00	18.78	15.95	15.55	8.42	7.42	9.60	12.59	21.13	11.45	7.09
26	E4a_E5b	KnownJunction	0	274.20	95.90	168.86	109.31	277.84	158.43	203.90	185.08	147.94	344.21	563.25	302.05	177.59	635.30	708.82	593.78	663.39	175.14	78.68	179.80	190.58	189.76	160.57
27	I4	Intron	0	7.66	3.38	2.87	11.14	9.10	5.46	16.68	6.78	7.17	9.75	9.01	16.93	15.65	7.98	8.06	8.48	10.32	3.93	4.37	5.95	3.54	5.71	5.26
28	I4_AR1	ActiveIntronRegion	0	7.48	3.76	3.65	11.69	14.74	8.26	23.05	11.55	9.82	11.60	11.53	25.38	21.34	8.39	15.89	4.04	9.38	0.76	4.80	4.91	2.04	7.15	2.78
29	I4_SR2	SilentIntronRegion	0	6.46	3.98	2.44	13.10	7.71	4.78	16.29	5.85	7.01	11.02	6.95	16.36	16.85	6.26	5.51	8.34	11.32	5.30	4.71	7.45	4.07	6.32	6.94
30	ER5a	ExonRegion	1	8.29	5.76	2.65	15.62	7.35	6.40	14.05	7.63	8.50	10.87	7.88	16.74	22.25	7.33	5.63	7.10	10.44	6.40	3.00	6.10	4.03	7.04	8.03
31	E5_Ab	KnownBoundary	0	3.63	0.00	4.11	14.12	4.16	0.00	10.25	2.05	10.19	14.48	9.21	6.30	12.99	2.47	10.75	0.00	21.13	16.95	8.09	8.63	8.09	3.00	0.00
32	ER5b	ExonRegion	0	135.37	117.98	146.29	121.72	170.55	145.61	214.57	205.94	154.19	340.87	629.13	383.65	172.65	740.52	574.45	582.34	579.55	171.11	148.15	103.96	199.92	197.27	162.53
33	E5a_E6a	KnownJunction	0	152.47	148.00	168.39	145.17	248.98	202.50	269.83	250.14	153.67	423.18	762.35	417.59	241.06	755.20	499.66	674.18	784.66	140.53	237.18	106.23	217.39	213.70	193.18
34	ER6a	ExonRegion	0	128.60	119.07	137.79	108.29	233.56	161.15	226.36	198.50	145.61	362.32	589.89	398.56	233.84	715.85	482.83	535.33	567.45	154.75	137.87	90.82	181.41	149.43	140.59
35	E6_Da	KnownBoundary	0	27.86	11.45	5.29	18.91	23.43	4.77	31.13	8.79	37.38	25.49	9.53	24.01	34.41	17.07	14.09	25.04	8.32	11.90	8.66	8.69	0.00	8.51	8.19
36	E6a_E7b	KnownJunction	0	315.76	171.81	177.26	116.04	380.56	325.84	358.69	237.61	135.70	448.30	826.74	517.37	313.62	979.93	707.96	839.78	683.40	173.73	225.14	99.26	267.13	257.73	250.46
37	ER6b	ExonRegion	1	8.50	3.67	2.96	12.81	14.68	9.76	18.64	10.48	20.81	15.00	13.56	29.07	18.46	19.01	9.03	24.61	14.98	5.73	9.63	7.08	5.23	10.94	4.96
38	E6_Db	NovelBoundary	1	24.23	6.12	6.00	9.79	30.98	13.00	42.93	11.05	19.53	17.14	22.85	56.42	32.95	7.71	13.35	29.56	26.18	8.12	8.66	12.40	8.65	3.00	16.82
39	I6	Intron	0	9.75	7.45	5.79	12.87	16.96	7.72	23.99	10.08	18.41	16.50	10.43	29.44	24.88	14.88	11.95	17.95	16.67	5.42	5.68	7.37	4.58	10.31	7.71
40	I6_SR1	SilentIntronRegion	0	7.97	6.56	10.63	16.38	20.49	8.38	22.59	13.97	24.74	17.45	16.57	38.15	31.24	21.66	11.48	26.88	24.35	9.08	4.40	10.53	10.42	11.33	13.06
41	I6_AR1	ActiveIntronRegion	0	5.26	1.99	2.36	9.90	7.91	4.77	23.20	6.60	10.99	15.92	5.25	20.37	14.61	13.95	5.62	22.78	14.49	2.12	8.18	5.26	2.25	9.72	2.47
42	I6_AR2	ActiveIntronRegion	0	5.97	4.78	4.72	12.42	18.24	4.31	22.71	6.66	17.73	14.50	8.18	30.53	24.44	12.11	10.78	12.57	7.76	3.89	4.49	9.00	0.52	9.78	4.87
43	I6_SR2	SilentIntronRegion	0	16.99	12.42	4.07	13.07	17.55	10.43	28.82	11.37	19.56	18.88	9.66	26.72	24.45	14.38	17.17	14.75	17.97	5.33	7.68	6.13	3.68	11.87	7.78
44	I6_AR3	ActiveIntronRegion	0	4.95	5.59	2.11	5.55	10.41	7.46	16.88	5.03	4.30	11.25	4.16	18.18	17.92	2.92	5.72	8.26	10.93	1.09	3.57	0.30	0.79	4.17	2.44
45	E7_Aa	NovelBoundary	1	25.63	9.14	14.61	45.12	15.37	18.97	49.15	36.39	30.82	41.29	17.95	79.98	85.22	21.66	33.01	36.32	26.55	13.51	8.56	13.93	8.22	47.33	12.63
46	ER7a	ExonRegion	1	32.56	16.04	14.15	30.34	35.78	12.89	44.72	20.88	36.36	37.93	26.26	34.13	51.37	22.60	26.40	38.32	32.95	15.53	13.00	13.37	15.81	18.96	10.22
47	E7_Ab	KnownBoundary	0	63.49	18.62	23.15	26.14	92.11	11.30	66.11	34.42	44.50	40.43	51.12	7.65	42.21	19.13	33.99	44.95	42.73	19.94	9.22	23.27	16.37	24.98	10.84
48	ER7b	ExonRegion	0	254.58	139.40	163.50	124.74	285.95	203.22	305.59	221.03	139.39	360.23	677.76	370.86	226.15	816.50	631.45	571.30	622.98	135.31	164.36	87.52	202.82	202.91	174.77
49	E7_Da	NovelBoundary	0	23.93	10.06	14.01	15.28	0.00	2.90	42.13	7.89	11.40	21.87	2.58	19.51	14.45	7.30	4.82	0.00	7.76	4.44	3.95	3.26	3.15	5.88	4.27
50	E7a_E8a	KnownJunction	0	287.68	163.39	164.54	99.02	269.10	195.23	290.15	221.31	120.05	332.77	549.93	421.04	211.84	760.55	609.31	490.04	562.60	122.12	181.75	88.65	171.80	168.82	157.15
51	I7	Intron	0	5.72	5.27	4.13	8.40	11.65	3.54	19.13	7.10	7.21	9.42	1.39	7.76	7.51	3.50	3.98	3.77	6.55	4.71	2.81	4.11	3.04	3.22	4.05
52	I7_SR1	SilentIntronRegion	0	5.74	5.29	4.14	8.43	11.69	3.55	19.19	7.12	7.23	9.45	1.39	7.79	7.54	3.51	3.99	3.78	6.57	4.73	2.82	4.12	3.05	3.23	4.06
53	ER8a	ExonRegion	0	178.06	124.77	137.34	102.70	236.33	130.94	224.33	165.62	103.19	275.37	463.21	436.09	172.17	642.63	445.20	420.60	444.29	96.86	95.92	89.26	135.81	113.32	111.12
54	E8_Da	NovelBoundary	0	23.63	30.19	8.66	15.95	19.44	8.12	35.60	12.12	23.21	24.61	12.69	12.45	13.64	21.72	8.90	28.71	29.17	9.20	21.18	11.63	17.17	2.94	8.28
55	E8a_E9b	KnownJunction	0	168.18	134.12	124.74	121.26	200.09	94.66	223.82	155.01	89.47	266.52	338.77	294.85	102.59	612.10	427.35	368.19	222.53	75.98	99.67	63.09	105.70	105.57	79.99
56	I8	Intron	0	16.28	14.36	11.78	26.87	31.43	14.07	33.88	22.15	28.02	32.74	17.80	28.81	38.92	20.62	13.87	26.96	26.25	13.17	9.46	14.95	12.20	15.44	13.76
57	I8_SR1	SilentIntronRegion	0	16.83	14.99	12.84	28.56	31.53	14.37	34.95	22.80	29.66	34.52	18.83	29.90	40.39	21.22	14.81	27.88	26.99	14.22	9.61	15.57	12.52	16.16	14.72
58	I8_AR1	ActiveIntronRegion	0	12.13	9.57	3.57	13.95	30.92	11.89	25.85	17.28	15.49	19.16	9.93	20.55	27.80	16.20	6.68	20.01	20.70	5.10	8.40	10.21	9.87	9.96	6.32
59	I8	Intron	0	33.49	25.39	17.43	33.49	28.58	12.85	24.83	27.85	26.66	31.72	16.26	28.71	24.07	11.97	17.19	25.98	14.54	9.02	7.23	10.10	6.32	17.80	10.79
60	I8_SR1	SilentIntronRegion	0	14.39	51.10	4.28	18.15	20.43	4.08	11.14	18.29	14.81	26.97	4.27	26.17	26.78	5.73	8.81	14.68	6.40	1.78	4.04	8.78	1.05	16.54	4.78
61	I8_AR5	ActiveIntronRegion	0	56.41	24.24	30.51	54.40	43.73	20.51	39.37	44.63	43.20	48.51	28.02	36.34	29.25	18.32	27.73	40.16	24.34	15.81	11.35	14.12	10.56	26.11	17.68
62	E9_Aa	NovelBoundary	0	48.23	25.19	38.08	71.35	104.75	20.84	58.69	77.92	40.71	83.78	52.33	56.42	43.99	9.01	22.99	12.48	27.21	1.95	25.13	17.32	5.68	10.72	11.87
63	ER9a	ExonRegion	0	113.25	34.63	23.33	72.25	53.84	24.17	50.80	54.70	48.25	67.63	29.17	42.64	35.38	23.63	30.87	38.48	33.79	16.26	7.69	19.81	10.31	32.53	22.86
64	E9_Ab	KnownBoundary	0	78.68	54.99	22.53	78.98	53.31	35.60	42.57	58.53	43.75	59.07	12.79	31.51	20.94	4.94	23.61	22.39	8.23	14.18	8.09	32.85	2.90	11.14	23.73
65	ER9b	ExonRegion	0	263.74	183.69	158.94	231.54	367.20	194.81	287.62	195.82	134.41	320.09	514.02	359.51	229.04	643.12	553.91	453.73	458.31	113.11	90.92	114.00	164.32	168.77	139.99
66	E9a_E10a	KnownJunction	0	0.00	2.76	1.69	1.40	7.56	2.90	2.25	4.93	1.68	1.10	2.16	12.15	0.00	11.77	4.45	7.69	9.16	0.00	0.00	3.26	0.00	0.00	3.84
67	E9a_E11a	KnownJunction	0	227.82	174.64	197.30	212.59	370.20	178.99	291.08	195.68	128.07	273.43	415.53	357.57	217.03	551.77	696.09	317.18	438.62	78.31	78.03	130.01	100.51	143.41	76.06
68	E10_Aa	NovelBoundary	0	484.97	412.36	128.79	141.41	456.37	262.29	538.65	138.13	126.85	113.33	86.60	75.17	87.17	89.06	94.57	206.95	233.19	157.52	387.87	303.99	151.73	127.92	294.25
69	ER10a	ExonRegion	1	25.67	6.87	5.83	4.80	31.98	11.70	25.61	6.43	5.88	8.38	7.77	21.21	17.73	29.51	20.16	26.90	21.65	0.55	6.37	25.21	8.62	5.46	16.06
70	E10_Ab	KnownBoundary	0	3221.61	2600.26	2388.38	2370.93	2490.92	1795.67	3868.70	2347.18	1940.23	1897.07	791.10	674.92	895.72	502.03	751.96	2175.07	1945.77	2374.20	1521.83	3217.78	1741.38	857.45	2264.09
71	ER10b	ExonRegion	0	11.24	4.30	4.45	9.06	20.17	7.21	22.88	8.38	10.52	8.28	15.92	18.71	14.82	24.52	21.46	24.56	12.99	0.37	1.65	11.14	5.65	4.87	7.84
72	E10b_E11a	KnownJunction	0	6.59	0.00	3.13	0.00	22.75	8.69	11.26	1.93	3.01	3.89	0.00	6.30	0.00	7.00	29.30	6.66	4.68	0.00	0.00	0.00	0.00	0.00	0.00
73	ER10c	ExonRegion	0	4.50	0.00	6.28	7.33	18.06	6.65	9.02	8.75	2.62	5.16	6.16	12.45	2.93	13.09	23.03	16.35	7.84	0.00	0.00	2.13	0.00	0.13	0.55
74	I10	Intron	0	17.75	9.32	4.45	7.33	13.57	4.65	8.78	8.54	8.26	10.17	5.09	3.90	6.35	4.05	6.97	5.22	5.15	0.63	3.42	1.24	1.29	1.83	3.15
75	I10_SR1	SilentIntronRegion	0	17.82	9.36	4.47	7.35	13.62	4.67	8.81	8.57	8.29	10.20	5.11	3.91	6.37	4.07	7.00	5.24	5.17	0.63	3.43	1.25	1.29	1.84	3.16
76	E11_Aa	NovelBoundary	0	45.93	8.16	14.72	12.15	7.30	5.51	20.80	3.66	9.17	15.61	5.37	0.00	6.49	7.12	6.30	4.36	12.53	0.00	0.00	0.00	3.15	5.69	3.50
77	ER11a	ExonRegion	0	206.69	126.93	169.74	189.08	235.26	114.77	187.84	194.34	130.46	269.06	386.87	245.99	98.92	500.18	491.01	357.85	342.61	83.04	103.72	92.15	116.53	158.38	107.93
78	E11_Da	KnownBoundary	0	148.40	68.01	27.88	19.38	71.14	77.17	103.61	79.64	27.81	106.88	194.73	129.04	47.24	222.91	298.91	97.75	111.55	14.96	49.79	60.85	32.87	78.81	22.79
79	ER11b	ExonRegion	0	135.48	51.24	31.09	32.78	80.10	39.86	57.78	45.33	26.96	63.13	116.10	62.38	47.21	120.83	111.58	89.24	67.67	11.84	26.40	23.10	20.12	47.43	21.48
80	E11_Db	KnownBoundary	0	354.80	160.89	48.64	62.93	327.76	101.19	168.04	68.47	46.93	76.58	190.52	86.88	86.52	164.70	178.87	203.02	99.02	22.63	45.08	23.33	11.43	86.77	38.16
81	ER11c	ExonRegion	0	122.88	65.58	18.82	30.93	131.41	49.67	67.74	31.83	27.24	41.22	97.67	36.44	55.24	101.91	109.60	86.27	48.69	7.85	21.24	8.69	4.10	36.52	17.78
82	E11_Dc	KnownBoundary	0	0.00	2.83	0.00	2.00	7.64	0.00	7.86	2.18	0.00	9.19	10.63	0.00	6.33	7.36	0.00	0.00	7.76	0.00	0.00	0.00	0.00	0.00	0.00
83	E11_Dd	KnownBoundary	0	0.00	0.00	2.72	3.26	0.00	2.50	4.15	2.14	1.62	17.92	2.11	0.00	0.00	2.35	0.00	0.00	0.00	0.00	0.00	2.62	0.00	0.00	0.00
84	ER11d	ExonRegion	0	14.82	24.40	7.35	12.27	32.11	5.50	21.18	10.37	12.35	27.53	21.26	12.99	18.76	38.98	31.91	8.92	16.50	1.85	3.19	4.26	0.00	6.25	0.00
85	ER11e	ExonRegion	0	11.84	3.55	5.27	5.94	12.57	2.60	15.59	4.41	5.23	13.07	4.30	4.96	10.29	14.54	19.49	13.07	5.77	0.25	3.25	1.92	0.00	4.61	0.00
86	IG44_AR1	ActiveIntergenicRegion	0	0.31	1.81	3.16	0.91	1.19	12.46	1.87	4.60	3.27	18.00	0.00	0.00	0.00	0.00	0.00	0.44	0.00	8.29	12.57	7.77	0.00	0.00	0.00