Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	FAM76A	Gene	0	38.70	24.04	14.24	18.32	49.39	32.48	38.39	38.44	32.21	32.75	21.56	25.48	25.26	26.40	28.61	31.04	21.26	8.57	7.96	10.97	13.58	22.28	24.87
2	373948	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	419687	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	373954	Transcript	0	21.40	21.79	16.66	14.73	24.07	11.95	10.55	29.90	22.23	22.09	2.87	13.62	15.66	5.04	6.73	0.66	2.38	0.91	0.77	6.14	1.34	14.79	4.71
5	234549	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	373949	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	10299	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	446647	Transcript	0	12.35	0.80	4.93	6.51	20.22	6.52	19.93	14.59	2.88	3.52	13.53	2.82	23.81	13.32	12.30	26.80	7.83	1.83	2.30	2.74	6.82	14.62	5.19
9	ER1a	ExonRegion	0	0.00	1.50	0.00	0.00	0.00	1.69	2.14	0.00	0.00	0.00	6.77	0.00	0.00	1.17	2.20	5.17	3.10	0.00	0.00	0.00	8.77	0.00	7.17
10	E1_Ab	KnownBoundary	0	0.00	5.79	0.00	0.00	0.00	8.92	5.43	1.77	1.33	1.21	4.37	0.00	0.00	0.00	0.00	14.44	4.11	1.91	0.00	0.00	13.22	0.00	14.34
11	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	3.16	7.47	2.21	3.58	6.08	1.24	3.33	4.42	0.00	0.00	0.00	5.19	14.01	8.60	1.66	0.00	0.00	0.00	0.00	17.07
12	ER1b	ExonRegion	0	0.00	0.98	0.00	1.13	1.20	0.32	2.69	0.00	0.55	0.55	3.53	0.00	0.00	0.11	4.50	5.53	4.78	0.64	0.00	0.22	4.26	0.07	6.18
13	ER1c	ExonRegion	0	2.08	5.77	3.31	3.56	3.60	4.50	9.61	4.09	4.57	5.33	8.90	2.71	2.93	5.47	8.90	9.86	13.62	3.06	2.97	0.98	9.58	4.49	12.51
14	E1a_E2a	KnownJunction	0	0.00	0.00	10.91	8.32	0.00	0.00	2.12	4.23	12.12	17.76	28.53	7.65	6.82	12.18	4.82	3.85	33.85	3.77	0.00	0.00	44.97	15.80	15.96
15	ER2a	ExonRegion	0	3.29	0.41	6.75	7.76	0.00	0.08	0.63	11.62	19.32	35.29	38.87	13.59	14.07	31.23	22.32	41.93	34.38	13.36	6.42	10.02	24.68	16.70	26.52
16	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.59	0.00	2.42	0.00	0.00	0.00	0.00	8.72	0.00	2.49	0.00	0.00	0.00	2.51	11.61
17	E2a_E4a	KnownJunction	0	0.00	0.00	5.50	7.66	0.00	0.00	0.00	15.81	28.79	47.68	41.43	11.40	28.41	39.73	38.57	69.38	38.34	19.69	18.17	17.64	8.28	11.51	59.16
18	E3_Aa	NovelBoundary	1	717.46	649.82	1184.82	1429.85	650.00	471.77	770.86	1634.54	1301.72	1258.38	191.00	41.56	126.78	71.28	183.45	733.06	458.34	1396.73	706.19	707.63	494.65	545.10	999.35
19	ER3a	ExonRegion	1	36.04	37.58	11.87	12.15	38.80	34.75	61.53	11.59	3.68	14.53	15.46	18.63	19.31	13.20	32.88	51.92	44.37	20.23	58.87	52.92	14.32	20.55	51.25
20	E3_Da	NovelBoundary	1	25.93	33.81	11.59	9.62	16.04	12.72	16.69	28.96	18.46	10.53	7.53	7.65	6.66	2.41	44.38	42.72	26.55	24.42	23.06	33.94	5.87	8.27	20.83
21	E3a_E4a	KnownJunction	0	0.00	0.00	1.69	0.00	4.67	0.00	0.00	0.00	0.00	0.00	2.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER4a	ExonRegion	1	3.62	5.32	7.66	11.99	1.99	6.74	13.00	14.83	26.72	34.51	34.48	18.03	20.12	51.82	37.87	118.24	30.13	26.78	13.15	12.57	21.56	18.18	108.44
23	E4a_E5a	KnownJunction	0	13.78	22.56	9.88	17.55	8.06	12.49	13.91	13.88	20.08	26.94	26.38	23.56	47.72	58.98	37.95	39.90	37.59	23.05	0.00	12.27	30.89	25.66	47.21
24	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER5a	ExonRegion	0	11.14	17.40	12.93	13.44	21.93	55.11	35.12	27.15	43.48	37.43	42.99	38.40	36.20	48.96	35.82	43.69	35.08	16.47	8.87	16.08	20.57	25.70	37.35
26	E5a_E6a	KnownJunction	0	29.86	31.64	9.49	14.15	12.99	17.15	23.76	43.54	54.74	35.46	33.64	25.21	13.64	56.86	28.68	39.22	44.79	17.49	4.71	23.84	22.36	42.31	50.36
27	ER6a	ExonRegion	0	19.71	13.78	10.34	12.85	27.80	15.37	23.51	33.83	49.93	30.88	38.83	37.86	31.01	52.90	40.09	56.57	52.54	17.26	8.06	9.60	26.77	28.20	40.19
28	E6_Ab	KnownBoundary	0	20.08	8.68	9.28	25.67	45.76	30.89	26.41	51.84	68.37	34.14	37.75	54.92	18.02	43.20	27.44	86.64	37.03	20.40	20.33	11.89	22.61	19.72	43.54
29	ER6b	ExonRegion	0	10.58	10.61	8.91	21.25	25.75	31.37	18.64	49.66	52.88	27.28	27.27	27.61	11.15	29.01	48.93	48.28	45.41	8.04	8.70	13.23	24.12	14.42	29.29
30	E6_Da	NovelBoundary	0	3.19	2.50	1.39	0.00	8.40	0.00	0.00	0.00	2.86	0.00	0.00	0.00	0.00	0.00	6.30	4.19	12.90	0.00	0.00	2.81	0.00	0.00	7.34
31	E6a_E7a	KnownJunction	1	12.74	15.19	3.67	20.71	22.92	23.79	18.37	32.12	27.46	14.29	12.48	6.30	12.82	14.30	61.44	21.87	51.24	1.91	4.14	12.14	13.28	14.02	12.21
32	E6a_E8a	KnownJunction	0	0.00	5.79	3.31	5.66	0.00	0.00	8.97	13.92	13.60	6.10	16.85	6.30	7.95	2.47	8.90	7.01	4.21	0.00	0.00	3.26	14.52	4.90	0.00
33	ER7a	ExonRegion	0	24.52	18.09	11.77	17.97	23.22	30.94	25.98	30.56	31.40	28.22	37.66	30.36	21.29	54.49	38.72	54.35	34.79	13.93	6.63	8.95	24.77	21.05	26.40
34	E7a_E8a	KnownJunction	0	12.52	29.07	20.73	18.68	25.47	35.32	41.25	35.04	45.75	26.24	50.28	13.05	37.82	48.15	54.27	70.49	28.33	20.48	16.94	9.46	17.73	30.74	61.29
35	ER8a	ExonRegion	0	19.00	17.38	18.24	19.91	45.29	23.21	29.20	49.77	45.50	32.98	42.65	27.44	34.73	57.05	52.05	58.50	39.83	17.31	15.67	17.37	41.37	19.20	45.69
36	E8_Da	NovelBoundary	0	6.30	3.35	0.00	6.53	0.00	6.98	4.15	7.48	7.99	17.06	0.00	0.00	6.82	0.00	4.45	24.52	4.58	4.85	4.80	2.36	2.78	0.00	0.00
37	E8a_E9a	KnownJunction	0	37.04	29.86	19.90	24.21	51.44	24.30	46.64	53.85	41.38	36.64	57.44	30.46	28.89	80.35	77.38	94.59	36.56	9.45	0.00	17.64	43.31	21.80	46.35
38	E9_Aa	NovelBoundary	0	21.86	17.37	4.88	7.29	15.87	7.84	5.43	17.33	13.19	11.90	0.00	6.30	0.00	0.00	8.90	8.20	0.00	0.00	0.00	3.26	0.00	3.12	0.00
39	ER9a	ExonRegion	0	38.49	34.27	20.77	14.47	56.85	46.19	55.85	57.97	44.25	44.37	39.79	44.14	47.96	60.43	59.87	75.32	41.23	15.51	6.75	14.62	32.56	31.56	43.59
40	E9_Da	NovelBoundary	0	16.97	5.26	4.41	3.63	54.58	13.63	29.54	20.17	25.49	9.08	9.95	13.35	6.17	11.54	19.78	28.71	17.02	2.57	0.00	0.00	5.62	0.00	0.00
41	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.42	0.00	13.15	0.00	16.94	0.00	4.39	0.00	0.00	0.00	0.00	5.27	0.00
42	E9a_E11a	KnownJunction	0	20.82	15.19	7.60	8.02	30.22	50.20	38.51	16.39	29.60	30.65	19.85	0.00	14.28	46.09	19.66	19.91	17.30	9.24	4.80	12.21	21.25	15.98	24.93
43	E10_Aa	NovelBoundary	0	27.49	12.04	4.44	2.00	8.66	2.90	15.06	19.92	10.13	4.94	23.69	0.00	19.48	9.30	6.18	23.33	34.60	1.87	0.00	2.62	11.24	14.70	7.77
44	ER10a	ExonRegion	0	18.79	3.98	1.10	5.12	19.14	9.34	10.82	12.59	1.93	4.22	17.69	17.89	29.56	22.07	30.51	38.52	13.00	2.82	8.49	1.83	9.15	16.88	6.85
45	E10_Da	KnownBoundary	1	393.33	425.65	185.21	264.50	431.75	365.47	658.86	276.02	233.04	147.18	75.76	128.74	237.00	84.17	144.14	186.87	179.62	227.08	240.29	302.20	175.51	118.85	274.70
46	ER10b	ExonRegion	0	12.35	0.80	4.93	6.51	20.22	6.52	19.93	14.59	2.88	3.52	13.53	2.82	23.81	13.32	12.30	26.80	7.83	1.83	2.30	2.74	6.82	14.62	5.19
47	E10_Db	NovelBoundary	1	24.60	2.50	10.76	14.42	23.17	5.34	29.24	21.97	10.91	9.94	7.05	0.00	38.63	10.36	8.90	13.07	4.77	2.57	9.41	3.26	5.87	17.70	4.35
48	I10	Intron	0	20.22	4.16	3.43	4.16	13.69	3.13	8.36	8.34	7.22	6.70	9.56	6.60	16.52	11.52	9.14	17.74	12.95	1.41	4.89	1.81	3.76	7.82	7.01
49	I10_SR1	SilentIntronRegion	0	20.35	4.19	3.45	4.19	13.78	3.15	8.41	8.40	7.27	6.75	9.62	6.65	16.63	11.60	9.20	17.85	13.04	1.42	4.92	1.83	3.78	7.87	7.06
50	E11_Aa	NovelBoundary	0	51.34	3.35	0.00	7.49	11.71	4.32	26.72	4.93	8.91	7.74	0.00	5.85	6.82	11.83	8.90	39.31	9.35	0.00	0.00	0.00	5.99	3.12	3.41
51	ER11a	ExonRegion	0	30.90	20.94	8.11	8.58	39.12	36.38	46.92	38.66	29.27	27.33	31.66	25.73	27.76	48.14	23.38	41.34	43.18	7.50	5.64	8.44	43.39	22.61	33.08
52	E11_Da	KnownBoundary	1	24.60	12.37	4.52	10.62	68.51	22.32	47.65	36.10	28.33	26.41	14.27	49.52	20.45	57.92	55.38	57.76	38.62	6.88	9.04	2.94	14.27	19.96	20.32
53	ER11b	ExonRegion	0	47.89	24.91	13.94	14.94	60.37	37.65	45.48	41.41	33.93	36.05	24.88	32.36	30.00	28.82	32.87	30.72	23.03	7.71	7.84	9.70	12.86	28.21	25.35
54	E11_Db	KnownBoundary	0	160.84	68.80	24.16	30.67	114.26	62.35	102.41	44.44	38.31	41.50	79.18	40.36	74.02	108.31	141.05	174.74	156.15	16.75	24.66	37.07	22.24	31.41	30.13
55	ER11c	ExonRegion	0	59.71	37.29	20.76	34.41	73.83	42.84	50.41	54.03	41.35	44.04	10.52	22.06	20.86	14.12	22.42	16.72	8.72	6.96	5.18	11.82	5.40	20.06	18.26
56	E11_Dc	KnownBoundary	0	32.75	73.21	32.70	19.05	24.45	27.77	36.52	35.57	35.24	37.23	4.47	7.20	28.57	7.06	13.35	0.00	0.00	2.28	0.00	8.25	3.15	15.25	4.10
57	ER11d	ExonRegion	1	21.40	21.79	16.66	14.73	24.07	11.95	10.55	29.90	22.23	22.09	2.87	13.62	15.66	5.04	6.73	0.66	2.38	0.91	0.77	6.14	1.34	14.79	4.71