Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FGR Gene 0 107.21 0.91 3.91 5.64 21.61 5.07 8.78 14.17 13.05 6.11 260.80 39.30 97.77 168.98 441.62 75.19 47.10 0.00 0.18 0.09 0.61 0.94 0.68 2 374005 Transcript 0 4.62 0.00 0.00 0.45 1.04 0.46 0.50 1.08 0.49 0.09 6.53 0.40 2.11 5.49 12.36 1.58 0.87 0.00 0.36 0.38 0.00 0.23 0.00 3 475472 Transcript 0 8.65 0.00 0.00 0.65 4.42 1.28 3.57 3.23 1.83 0.00 24.71 8.47 18.35 14.05 32.54 8.66 9.76 0.00 0.00 0.00 0.00 0.00 0.00 4 374003 Transcript 1 41.58 0.00 0.00 0.47 0.62 3.43 2.47 1.19 2.12 0.00 106.66 8.54 19.37 39.28 161.43 36.65 22.56 0.00 0.00 0.00 0.00 0.48 0.00 5 468038 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 399173 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 457296 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 469062 Transcript 0 5.42 0.00 1.21 0.15 0.29 0.00 0.04 1.39 1.09 0.03 14.06 0.21 1.29 14.16 41.13 2.04 0.36 0.00 0.00 0.00 0.00 0.00 0.00 9 374004 Transcript 0 2.43 0.00 0.69 1.09 2.90 1.19 1.82 0.75 2.41 0.68 12.61 13.76 9.38 6.75 26.00 1.75 2.83 0.00 0.00 0.00 0.00 0.00 0.02 10 ER1a ExonRegion 0 2.91 0.00 0.00 0.00 0.95 0.92 0.07 0.11 0.16 0.18 0.32 0.00 0.00 3.81 5.80 0.52 1.74 0.00 0.00 0.75 0.00 0.00 0.00 11 E1_Ab KnownBoundary 0 28.38 0.00 0.00 0.00 0.00 8.57 0.00 4.07 2.92 1.40 2.68 0.00 0.00 22.13 21.63 11.36 4.77 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 5.09 1.50 1.15 0.00 1.09 2.15 3.72 2.25 1.02 0.90 2.07 0.25 0.00 13.18 15.22 3.36 8.52 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E4a KnownJunction 0 6.00 0.00 1.24 0.00 4.33 0.00 0.00 2.14 0.00 0.00 2.26 0.00 0.00 7.71 4.45 0.00 13.37 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 1 65.98 0.00 0.00 0.94 1.24 1.42 0.70 2.39 4.23 0.00 158.73 10.78 13.09 66.60 265.12 61.69 31.93 0.00 0.00 0.00 0.00 0.97 0.00 15 E2a_E4a KnownJunction 0 17.19 0.00 0.00 0.00 0.00 5.45 4.24 0.00 0.00 0.00 54.59 6.30 25.65 11.95 57.73 11.62 13.18 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3a ExonRegion 0 29.95 0.00 0.00 0.00 2.57 0.88 0.21 1.24 1.32 0.00 89.15 4.66 17.21 21.88 82.22 20.19 16.50 0.00 0.00 0.00 0.00 0.00 0.00 17 E3_Ab KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 0.00 2.08 0.00 1.79 0.00 7.32 6.30 20.29 2.77 25.34 8.72 8.88 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3b ExonRegion 0 5.06 0.00 0.00 0.00 0.00 0.00 1.89 0.00 4.48 0.00 53.48 0.96 8.51 9.14 30.52 2.86 11.31 0.00 0.00 0.00 0.00 0.00 0.00 19 E3_Ac KnownBoundary 1 14.45 0.00 0.00 0.00 0.00 0.00 1.99 0.00 6.68 0.00 126.24 5.55 31.49 4.94 31.65 0.00 26.93 0.00 0.00 0.00 0.00 0.00 0.00 20 ER3c ExonRegion 1 10.70 0.00 0.00 0.90 1.53 0.00 1.82 0.00 4.34 0.00 143.64 0.00 11.79 15.31 75.76 9.26 20.94 0.00 0.00 0.00 0.00 0.00 0.00 21 E3a_E4a KnownJunction 1 10.45 0.00 0.00 1.80 8.66 0.00 1.85 0.00 1.30 0.00 157.99 0.00 5.84 22.72 129.06 22.13 13.18 0.00 0.00 0.00 0.00 0.00 0.00 22 ER4a ExonRegion 0 18.54 0.00 0.21 4.33 3.65 1.98 2.21 2.94 4.59 1.15 237.10 17.87 56.13 82.06 240.07 42.18 38.77 0.00 0.00 0.00 0.00 0.00 2.10 23 E4a_E5b KnownJunction 1 16.45 0.00 0.00 6.53 4.16 0.00 0.00 4.60 12.44 0.00 312.08 0.00 38.96 90.88 265.04 35.29 63.49 0.00 0.00 0.00 0.00 0.00 0.00 24 I4 Intron 0 7.81 0.26 0.46 0.77 1.02 0.47 1.52 1.31 1.17 0.22 12.29 6.45 31.19 5.76 39.33 5.67 1.26 0.00 0.00 0.00 0.00 0.26 0.00 25 I4_SR1 SilentIntronRegion 0 7.85 0.26 0.47 0.78 1.01 0.47 1.52 1.32 1.18 0.22 12.35 6.48 31.35 5.79 39.53 5.70 1.27 0.00 0.00 0.00 0.00 0.27 0.00 26 ER5a ExonRegion 0 2.43 0.00 0.69 1.09 2.90 1.19 1.82 0.75 2.41 0.68 12.61 13.76 9.38 6.75 26.00 1.75 2.83 0.00 0.00 0.00 0.00 0.00 0.02 27 E5_Ab KnownBoundary 0 7.26 0.00 0.00 2.03 3.57 8.69 2.25 2.14 1.68 0.00 7.32 0.00 6.01 6.89 28.18 3.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5b ExonRegion 1 14.46 0.00 2.42 6.04 8.41 2.07 3.01 5.51 15.79 3.11 259.08 11.96 60.86 185.28 533.31 59.19 57.96 0.00 0.00 0.00 0.00 0.94 0.17 29 E5_Da KnownBoundary 0 21.11 0.00 5.85 5.03 7.47 6.76 7.68 12.77 8.07 1.45 228.43 51.17 69.80 241.16 637.25 131.16 55.73 0.00 0.00 0.00 0.00 5.76 0.00 30 E5a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER5c ExonRegion 0 41.09 0.00 2.04 4.58 18.54 6.25 7.49 12.44 15.17 7.20 283.48 30.36 65.75 197.58 471.77 87.12 48.72 0.00 0.00 0.00 0.00 0.87 0.97 32 E5_Db KnownBoundary 0 44.01 0.00 0.00 0.00 12.22 0.00 3.97 5.05 5.84 9.40 80.23 11.70 20.45 58.86 144.76 24.10 8.98 0.00 0.00 0.00 0.00 0.00 0.00 33 E5b_E6a KnownJunction 1 34.82 0.00 1.83 0.00 4.07 0.00 14.49 8.46 14.03 1.29 316.19 0.00 6.33 147.45 277.15 45.29 26.93 0.00 0.00 0.00 0.00 0.00 0.00 34 E5b_E7a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.06 0.00 6.82 6.71 9.15 0.00 8.04 0.00 0.00 0.00 0.00 0.00 0.00 35 ER5d ExonRegion 0 57.91 0.00 0.00 1.77 7.84 2.25 2.23 9.52 7.88 3.50 109.77 16.08 31.76 86.90 166.36 34.52 26.57 0.00 0.00 0.00 0.00 0.37 0.00 36 E5_Dc NovelBoundary 0 34.52 0.00 3.67 1.40 21.05 2.67 23.45 9.20 3.62 1.67 68.91 38.26 68.83 59.92 127.57 27.34 30.01 0.00 0.00 0.00 0.00 0.00 0.00 37 E5_Dd NovelBoundary 0 39.49 0.00 0.00 2.06 15.11 0.00 10.47 1.64 4.72 0.00 73.60 44.41 71.59 77.11 209.41 28.97 13.28 0.00 0.00 0.00 0.00 2.45 0.00 38 ER5e ExonRegion 0 8.65 0.00 0.00 0.65 4.42 1.28 3.57 3.23 1.83 0.00 24.71 8.47 18.35 14.05 32.54 8.66 9.76 0.00 0.00 0.00 0.00 0.00 0.00 39 I5 Intron 0 42.45 0.43 3.12 2.17 11.42 3.91 2.54 3.85 3.93 0.73 91.57 18.80 36.68 68.38 133.11 29.81 12.68 0.00 0.00 0.91 0.00 0.44 0.00 40 I5_AR1 ActiveIntronRegion 1 42.80 0.44 3.14 2.19 11.52 3.95 2.56 3.88 3.96 0.74 92.32 18.96 36.99 68.94 134.19 30.06 12.77 0.00 0.00 0.92 0.00 0.45 0.00 41 E6_Aa NovelBoundary 0 62.38 0.00 1.71 3.53 15.70 0.00 10.20 10.27 11.72 1.07 86.18 6.30 20.45 100.77 141.05 31.44 25.15 0.00 0.00 0.00 0.00 0.00 0.00 42 ER6a ExonRegion 0 59.45 0.00 4.18 3.45 13.59 3.26 11.00 16.66 20.65 10.47 373.88 30.10 107.83 246.47 466.93 51.10 63.07 0.00 0.00 0.00 0.00 0.00 0.00 43 E6a_E7a KnownJunction 0 74.98 0.00 1.33 11.29 10.87 2.90 20.01 19.22 23.76 7.36 326.87 63.77 95.45 326.86 589.90 59.98 73.87 0.00 0.00 0.00 0.00 0.00 0.00 44 ER7a ExonRegion 0 106.57 1.48 3.71 7.63 10.08 5.45 8.37 17.32 20.59 9.41 404.44 53.88 134.87 279.87 566.54 132.30 72.49 0.00 0.00 0.00 0.00 3.14 0.00 45 E7a_E8a KnownJunction 1 130.62 3.35 6.15 1.63 32.00 8.01 8.57 15.24 16.12 14.83 350.35 23.56 166.55 301.14 568.76 101.26 63.21 0.00 0.00 0.00 0.00 5.14 0.00 46 I7_SR1 SilentIntronRegion 1 5.74 0.00 0.45 0.00 3.30 0.00 2.61 1.27 1.36 0.00 4.76 5.15 52.41 6.05 26.32 4.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER8a ExonRegion 0 75.87 0.59 2.57 3.75 14.67 0.81 8.30 20.09 18.40 9.53 395.84 63.07 190.35 305.68 621.59 109.40 70.97 0.00 0.00 0.00 2.16 1.24 0.00 48 E8a_E9a KnownJunction 0 81.57 0.00 0.00 4.30 8.49 2.50 8.26 13.10 18.72 7.82 480.17 55.37 118.50 266.29 575.44 111.34 52.64 0.00 0.00 0.00 0.00 2.33 0.00 49 ER9a ExonRegion 0 94.45 0.00 3.70 2.57 23.35 5.07 8.49 18.53 22.23 10.95 396.91 49.99 162.09 279.61 567.49 116.03 56.07 0.00 2.17 0.00 1.50 2.03 0.59 50 E9a_E10a KnownJunction 0 139.21 0.00 5.82 6.99 18.76 12.15 6.23 8.42 28.82 7.76 421.32 87.03 210.21 368.36 916.13 118.17 36.65 0.00 0.00 0.00 0.00 0.00 4.35 51 ER10a ExonRegion 0 71.30 1.33 3.14 3.59 12.44 4.56 4.90 11.69 13.44 5.62 274.71 50.29 122.69 219.93 495.89 73.75 47.93 0.00 0.00 0.00 0.72 0.00 0.40 52 E10a_E11b KnownJunction 1 82.09 0.00 1.30 1.90 11.12 0.00 4.50 11.38 14.67 5.86 210.79 11.85 113.14 176.41 510.91 41.61 44.88 0.00 0.00 0.00 0.00 0.00 0.00 53 ER11a ExonRegion 0 10.83 0.00 2.43 0.29 0.58 0.00 0.08 2.78 2.18 0.07 28.12 0.42 2.57 28.31 82.26 4.08 0.71 0.00 0.00 0.00 0.00 0.00 0.00 54 E11_Ab KnownBoundary 0 31.04 0.00 3.43 1.33 3.14 0.00 0.00 5.09 3.27 0.00 27.22 0.00 0.00 28.02 108.04 8.72 9.35 0.00 0.00 0.00 0.00 0.00 0.00 55 ER11b ExonRegion 0 70.40 0.00 4.42 5.73 28.19 7.09 6.66 15.64 13.49 8.34 267.17 23.13 74.71 224.33 568.88 78.72 59.45 0.00 0.00 0.00 2.07 0.00 1.51 56 E11_Da KnownBoundary 1 109.43 0.00 7.60 4.93 26.83 6.64 9.80 15.07 11.72 13.65 368.36 7.65 73.70 213.85 548.86 111.34 86.58 0.00 0.00 0.00 8.71 0.00 0.00 57 ER11c ExonRegion 0 73.13 0.46 4.49 3.80 18.43 7.36 5.40 16.18 11.59 7.77 331.49 47.68 123.29 198.47 548.30 81.77 73.44 0.00 0.00 0.00 3.06 0.00 0.00 58 E11b_E12a KnownJunction 0 89.50 3.22 2.45 9.09 32.34 5.39 4.02 23.91 8.39 9.51 311.76 54.32 98.69 218.14 513.26 70.15 87.42 0.00 0.00 0.00 0.00 0.00 0.00 59 ER12a ExonRegion 0 94.45 0.87 5.09 9.17 20.02 4.48 7.94 15.38 7.17 8.04 317.52 55.55 95.20 238.58 626.56 99.32 72.53 0.00 0.00 0.00 1.69 0.00 1.79 60 E12a_E13a KnownJunction 0 120.84 0.00 3.08 20.31 23.51 10.11 12.37 17.46 12.33 11.07 341.72 38.11 99.99 223.62 698.31 127.06 76.02 0.00 0.00 0.00 4.70 0.00 0.00 61 ER13a ExonRegion 0 132.45 0.67 5.04 12.30 19.76 7.78 10.76 20.17 12.61 7.68 396.26 54.60 137.20 262.04 693.93 109.24 88.35 0.00 0.00 0.00 2.07 2.07 1.05 62 E13a_E14a KnownJunction 0 253.38 0.00 10.38 18.55 52.97 7.33 6.62 14.66 25.52 16.09 507.18 94.38 168.82 383.07 788.68 166.88 78.45 0.00 0.00 0.00 0.00 0.00 0.00 63 E14_Aa NovelBoundary 0 57.34 0.00 1.27 1.66 3.82 5.05 4.50 4.35 0.00 1.64 6.69 0.00 13.15 14.36 18.42 0.00 8.23 0.00 0.00 0.00 0.00 0.00 0.00 64 ER14a ExonRegion 0 252.17 1.94 10.70 16.73 46.48 12.77 14.30 21.64 27.36 14.44 464.29 64.22 156.80 317.79 883.92 160.02 92.20 0.00 0.00 0.00 0.00 2.89 0.00 65 E14a_E15a KnownJunction 1 398.14 3.35 8.90 11.12 33.19 21.41 14.09 23.33 36.89 24.50 526.03 36.91 221.74 284.66 909.70 163.55 85.83 0.00 0.00 0.00 0.00 3.12 0.00 66 ER15a ExonRegion 0 292.62 2.92 11.17 12.54 42.59 13.08 21.31 34.64 25.87 12.60 475.29 69.61 173.41 298.96 884.22 149.31 82.49 0.00 0.00 0.24 1.49 1.40 2.44 67 E15_Da KnownBoundary 0 1290.67 15.06 17.80 10.32 160.27 12.89 79.14 53.07 26.65 20.31 850.64 82.68 238.30 401.50 1151.99 310.94 168.58 0.00 0.00 0.00 0.00 9.25 4.35 68 ER15b ExonRegion 0 220.60 2.45 6.49 9.63 67.46 6.39 21.28 20.19 17.41 6.82 346.86 91.85 208.09 182.78 580.86 99.59 48.79 0.00 0.43 0.29 0.00 1.86 1.06 69 E15_Db KnownBoundary 0 48.45 0.00 0.00 0.00 11.12 0.00 9.19 0.00 0.00 0.00 31.90 0.00 25.81 7.48 38.45 4.36 3.65 0.00 0.00 0.00 0.00 0.00 0.00 70 E15_Dc KnownBoundary 0 6.67 0.00 0.00 0.00 8.66 0.00 0.00 2.55 0.00 0.00 9.95 0.00 6.82 6.00 4.45 3.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 ER15c ExonRegion 0 49.21 0.25 0.61 1.53 12.04 0.00 4.80 1.73 0.00 0.14 40.35 2.16 24.04 18.47 74.34 6.69 3.30 0.00 0.40 0.00 0.00 0.00 0.00 72 ER15d ExonRegion 0 6.32 0.00 0.00 0.91 1.14 0.00 0.93 2.05 0.82 0.00 12.73 0.80 4.22 7.17 18.92 2.65 0.00 0.00 0.71 0.00 0.00 0.47 0.00