Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP1-43E13.1 Gene 0 2.34 0.82 1.47 0.61 5.38 3.50 5.06 0.78 1.67 2.06 1.36 0.72 0.33 2.03 6.01 4.78 2.32 0.74 0.64 0.64 5.32 4.19 0.30 2 437898 Transcript 0 5.38 0.79 2.68 0.25 10.37 7.68 7.45 0.29 2.03 2.43 2.72 1.16 0.13 4.84 15.13 10.94 0.91 0.28 1.76 0.26 7.94 3.07 0.85 3 IG4_AR2 ActiveIntergenicRegion 0 27.50 0.66 0.00 2.64 12.17 16.05 15.03 0.84 0.60 4.44 3.77 0.00 0.00 3.51 7.43 5.79 2.14 1.79 0.00 2.07 10.02 2.71 4.77 4 ER1a ExonRegion 0 12.38 1.65 2.08 0.07 16.87 15.29 19.14 0.00 1.15 1.87 5.21 3.08 0.00 11.29 22.82 26.75 0.11 0.00 5.24 0.07 10.46 2.33 2.54 5 E1_Da NovelBoundary 0 14.97 3.35 6.45 13.95 32.85 16.64 37.01 15.73 6.37 16.65 34.64 0.00 6.17 41.32 33.13 82.88 30.11 25.87 39.15 8.31 19.34 4.59 0.00 6 E1a_E2a KnownJunction 0 2.74 0.00 4.58 0.00 10.36 5.79 0.00 0.00 3.21 3.33 2.11 0.00 0.00 2.41 18.79 4.19 0.00 0.00 0.00 0.00 8.71 2.45 0.00 7 I1 Intron 0 24.78 14.23 11.65 26.88 41.91 26.46 41.06 24.80 25.26 24.77 11.39 35.79 21.60 20.60 18.16 18.73 10.38 5.55 8.14 9.50 6.19 7.81 10.93 8 I1_AR1 ActiveIntronRegion 0 25.51 8.36 10.01 22.15 35.86 23.64 40.04 22.87 20.87 24.37 14.41 44.45 26.60 28.29 21.63 23.30 12.55 5.77 6.03 9.33 4.03 5.12 9.47 9 I1_SR1 SilentIntronRegion 0 6.52 7.58 4.54 18.49 27.70 10.23 19.26 18.84 26.92 28.53 1.89 14.71 4.96 0.94 3.46 6.59 1.91 1.49 1.48 5.25 0.00 5.78 6.31 10 I1_AR2 ActiveIntronRegion 0 19.73 15.24 7.23 23.07 35.85 19.50 32.96 21.23 22.16 20.90 3.80 19.78 10.29 2.38 5.41 4.99 3.96 3.09 2.51 7.28 5.28 6.82 10.58 11 I1_AR3 ActiveIntronRegion 0 17.09 22.67 15.91 39.02 38.74 23.50 35.44 27.07 37.96 25.40 3.96 18.33 9.72 7.44 15.18 6.47 5.08 2.12 13.88 9.00 8.47 12.55 11.30 12 I1_SR2 SilentIntronRegion 0 41.35 46.74 27.81 55.73 102.64 65.86 73.99 43.67 47.33 32.65 13.33 25.82 22.55 15.99 21.85 26.05 13.75 12.94 27.91 16.20 22.14 23.95 22.78 13 Ix Intron 0 7.62 1.22 0.00 0.00 3.21 0.00 6.36 1.55 1.10 4.10 1.16 13.75 0.00 0.80 5.12 0.00 3.96 1.65 0.00 2.55 0.00 0.00 3.52 14 Ix_SR1 SilentIntronRegion 0 7.80 1.25 0.00 0.00 3.29 0.00 6.49 1.58 1.13 4.19 1.19 14.08 0.00 0.82 5.24 0.00 4.06 1.69 0.00 2.61 0.00 0.00 3.61 15 Ix Intron 0 14.78 4.94 4.71 4.93 12.18 9.74 17.68 8.21 6.42 12.71 10.27 5.53 11.64 16.97 16.29 14.44 21.04 6.41 11.12 8.40 11.37 6.96 16.05 16 Ix_SR1 SilentIntronRegion 0 14.82 4.95 4.73 4.95 12.22 9.77 17.74 8.23 6.44 12.75 10.30 5.54 11.68 17.02 16.34 14.48 21.11 6.43 11.15 8.42 11.39 6.98 16.09 17 Ix_SR1 SilentIntronRegion 0 7.52 3.35 2.50 3.34 11.01 4.02 18.51 2.83 1.51 4.69 6.35 6.84 5.30 7.09 5.05 13.82 10.86 3.53 4.37 4.06 6.65 6.28 10.47 18 Ix Intron 0 13.98 7.83 2.11 9.90 15.27 6.12 18.60 6.94 3.78 10.42 3.72 8.36 9.36 2.84 9.54 10.68 8.05 5.72 4.09 3.55 3.96 3.08 10.36 19 Ix_SR1 SilentIntronRegion 0 14.02 7.85 2.11 9.93 15.31 6.13 18.64 6.96 3.79 10.45 3.73 8.39 9.39 2.84 9.56 10.70 8.06 5.74 4.10 3.56 3.97 3.08 10.39 20 Ix Intron 0 15.31 10.14 3.64 14.18 21.69 12.00 27.90 9.15 7.34 12.68 7.23 18.59 21.94 5.37 11.45 14.64 11.73 8.25 3.97 7.83 7.42 9.74 16.12 21 Ix_SR1 SilentIntronRegion 0 16.63 15.35 5.06 11.89 20.20 6.50 28.97 6.35 7.66 13.96 7.15 18.40 22.95 4.75 11.68 13.28 9.66 6.93 1.96 6.88 8.14 8.35 12.23 22 Ix_AR1 ActiveIntronRegion 0 18.39 8.86 2.62 17.45 28.17 21.83 34.48 14.22 8.15 15.11 7.70 23.60 24.14 5.33 10.80 18.95 14.69 10.10 5.08 7.29 7.31 11.85 19.06 23 Ix_SR2 SilentIntronRegion 0 1.95 2.66 0.00 4.35 4.94 4.73 11.97 1.79 0.81 5.07 0.00 0.83 17.50 0.19 0.00 0.00 0.51 0.00 0.00 2.13 5.09 1.28 1.58 24 Ix_AR4 ActiveIntronRegion 0 9.62 2.98 4.91 18.72 18.32 4.86 15.89 7.33 8.24 6.74 10.17 15.58 18.40 9.83 18.57 13.54 15.61 11.89 10.08 13.97 6.71 12.91 30.29 25 Ix Intron 0 15.99 9.08 4.39 18.48 12.87 17.01 27.96 15.04 18.33 17.02 12.61 11.41 15.97 14.12 16.29 23.48 11.90 15.62 10.39 5.85 24.22 7.16 23.20 26 Ix_AR1 ActiveIntronRegion 0 16.10 9.14 4.42 18.61 12.95 17.13 28.15 15.14 18.46 17.14 12.70 11.49 16.07 14.22 16.40 23.64 11.98 15.72 10.46 5.89 24.38 7.20 23.35 27 Ix Intron 0 9.16 12.41 5.64 14.12 17.37 17.72 30.39 13.33 10.52 14.53 10.60 9.96 10.45 8.62 6.51 20.91 16.06 8.24 11.81 6.58 14.47 7.73 14.75 28 Ix_AR1 ActiveIntronRegion 0 7.87 11.92 3.96 13.74 16.67 19.34 33.33 15.29 11.79 8.81 18.79 7.48 11.82 9.22 4.12 35.82 16.91 11.71 13.83 5.05 20.95 7.76 17.37 29 Ix_SR1 SilentIntronRegion 0 9.71 12.66 6.34 14.34 17.72 17.14 29.34 12.61 10.06 16.88 7.37 10.99 9.94 8.41 7.50 15.03 15.79 6.88 11.06 7.22 11.94 7.75 13.76 30 Ix Intron 0 11.99 1.28 5.75 8.31 10.95 16.74 15.42 4.87 2.32 9.68 3.65 7.86 3.65 2.11 6.66 12.16 13.51 3.47 5.01 2.68 4.86 9.84 7.40 31 Ix_SR1 SilentIntronRegion 0 12.14 1.30 5.82 8.42 11.09 16.95 15.61 4.92 2.35 9.81 3.70 7.96 3.69 2.13 6.75 12.32 13.68 3.51 5.08 2.71 4.92 9.95 7.49 32 Ix Intron 0 9.64 5.06 3.64 8.32 11.88 12.71 19.37 9.56 7.33 12.83 3.33 11.46 5.91 4.85 7.02 9.90 8.09 8.48 8.29 5.70 9.44 6.22 9.78 33 Ix_SR1 SilentIntronRegion 0 11.29 5.22 2.97 7.70 12.24 15.49 19.77 10.75 7.13 13.87 2.95 13.79 6.67 5.00 6.09 9.67 9.15 8.74 5.92 6.70 10.51 7.25 11.10 34 Ix_AR1 ActiveIntronRegion 0 21.17 8.81 1.23 5.45 16.05 1.83 15.15 16.52 13.45 19.75 1.72 9.62 16.68 4.69 11.28 6.93 9.90 14.78 13.10 4.73 10.53 8.33 5.87 35 Ix_SR2 SilentIntronRegion 0 6.94 4.78 4.73 9.37 11.32 8.66 18.92 7.66 7.57 11.17 3.97 7.94 4.57 4.65 8.43 10.36 6.47 8.02 11.94 4.20 7.83 4.63 7.86 36 Ix Intron 0 11.73 11.27 4.41 11.24 27.75 13.03 22.19 6.58 3.92 9.95 3.02 2.64 3.84 2.13 7.76 8.44 4.69 5.87 6.34 3.32 6.26 2.37 7.51 37 Ix_SR1 SilentIntronRegion 0 11.79 11.33 4.43 11.30 27.90 13.10 22.32 6.61 3.94 10.01 3.04 2.66 3.86 2.14 7.80 8.49 4.72 5.91 6.37 3.34 6.29 2.38 7.55 38 Ix Intron 0 13.90 9.87 6.08 17.97 14.26 9.60 18.64 12.50 11.56 15.12 7.36 8.09 12.73 6.53 8.28 13.01 13.82 16.35 9.09 5.06 13.41 5.55 11.74 39 Ix_SR1 SilentIntronRegion 0 13.95 9.91 6.10 18.04 14.31 9.63 18.71 12.55 11.60 15.18 7.38 8.12 12.78 6.55 8.31 13.05 13.87 16.40 9.13 5.08 13.46 5.57 11.78 40 ER2a ExonRegion 0 1.02 0.71 1.39 0.68 3.87 1.95 3.21 0.88 1.73 2.09 0.85 0.41 0.38 0.81 3.79 1.88 2.62 0.84 0.04 0.72 4.64 4.44 0.00