Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP5-1182A14.1 Gene 0 4.83 0.59 2.89 2.06 1.62 26.17 1.74 4.57 7.71 2.02 6.63 0.60 1.05 2.40 2.12 1.26 2.91 4.01 4.46 3.21 12.63 3.14 5.00 2 334429 Transcript 0 5.32 0.53 2.18 1.53 1.48 26.12 2.07 2.93 4.84 1.71 4.40 0.49 0.50 1.11 1.73 0.92 2.34 3.63 2.73 2.47 9.07 2.39 4.41 3 457982 Transcript 0 1.16 0.00 0.81 0.34 0.00 3.25 0.00 0.43 1.23 0.00 0.40 0.68 0.00 0.00 0.00 0.00 0.00 0.23 0.00 0.00 0.00 0.00 0.18 4 418421 Transcript 0 0.00 0.00 4.33 0.75 0.00 0.00 0.00 4.46 7.97 0.73 2.37 0.00 0.00 0.00 0.00 0.00 0.00 3.65 7.01 0.00 1.24 0.00 0.00 5 ER1a ExonRegion 0 3.48 0.95 2.82 1.12 1.88 6.20 1.17 6.14 7.27 1.81 9.62 1.05 0.45 2.77 0.98 1.22 3.87 5.71 5.98 3.44 12.80 3.42 4.03 6 E1_Ab KnownBoundary 0 14.97 0.00 33.14 14.15 0.00 23.57 1.68 18.48 30.61 17.41 11.00 0.00 0.00 0.00 15.70 7.95 0.00 38.43 49.41 11.63 34.41 3.12 4.35 7 ER1b ExonRegion 0 0.00 0.00 3.77 1.92 0.00 7.34 0.86 3.90 12.11 2.14 8.98 1.27 7.17 3.63 0.23 1.46 2.27 2.86 0.44 6.34 26.70 0.04 11.06 8 E1_Da KnownBoundary 0 0.00 0.00 4.08 1.83 0.00 8.35 2.16 2.55 6.68 1.42 22.27 11.55 19.48 7.42 0.00 4.27 4.77 1.87 3.58 5.56 38.49 2.82 11.18 9 E1a_E1d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1c ExonRegion 0 2.47 0.88 3.05 2.60 2.23 7.76 1.12 4.92 7.56 2.45 11.54 1.70 2.77 4.87 3.97 2.63 4.37 4.64 7.71 2.68 21.99 4.99 9.33 11 E1_Ac KnownBoundary 0 2.82 0.00 0.00 4.13 0.00 5.11 4.11 4.27 4.60 0.00 2.68 0.00 0.00 9.48 0.00 3.67 4.21 1.74 3.95 0.00 3.03 8.33 14.60 12 E1_Ad KnownBoundary 0 15.04 9.93 18.04 7.33 3.90 31.29 1.85 9.04 14.38 7.23 28.90 0.00 13.64 5.47 0.00 21.70 13.28 29.31 37.18 22.12 17.61 6.18 4.35 13 ER1d ExonRegion 0 3.27 0.00 2.45 2.73 5.35 9.00 2.77 8.01 11.79 1.15 9.66 0.00 9.38 8.86 2.90 2.97 6.60 3.53 2.90 0.00 10.62 4.55 6.67 14 E1_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.84 0.00 2.51 1.77 0.00 2.42 0.00 0.00 0.00 6.30 0.00 0.00 2.32 0.00 0.00 5.99 0.00 0.00 15 E1b_E1e KnownJunction 0 0.00 0.00 1.54 0.00 0.00 0.00 0.00 7.23 10.53 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 16 E1_Ae KnownBoundary 0 0.00 0.00 1.54 0.00 4.16 13.80 0.00 4.48 4.51 0.00 0.00 0.00 0.00 0.00 0.00 3.59 0.00 1.78 0.00 2.68 0.00 2.51 0.00 17 ER1e ExonRegion 0 2.12 0.00 3.09 2.73 6.88 12.40 1.83 8.81 12.65 1.42 8.28 0.00 9.38 4.64 6.22 1.56 3.62 1.85 0.00 0.51 12.28 1.79 1.12 18 ER1f ExonRegion 0 0.00 0.00 4.41 1.64 5.35 12.47 1.32 8.64 13.59 2.29 5.80 0.00 3.75 2.27 8.70 2.97 2.64 1.85 0.00 2.13 13.22 2.08 0.00 19 ER1g ExonRegion 0 0.00 1.14 4.42 1.39 1.09 7.76 1.56 7.01 12.53 1.11 3.82 0.00 3.09 3.62 4.27 1.14 3.92 4.85 3.78 3.88 9.08 2.08 5.39 20 E1c_E2a KnownJunction 0 0.00 0.00 5.59 1.66 0.00 10.16 0.00 5.09 18.46 0.00 16.64 6.60 6.82 4.71 10.51 0.00 3.74 4.60 21.46 11.63 13.71 0.00 15.19 21 ER2a ExonRegion 0 1.91 0.00 3.12 0.69 0.00 8.68 1.41 4.67 8.08 1.52 10.06 0.00 2.45 5.12 6.86 0.00 4.21 4.59 5.44 5.55 12.33 3.21 8.91 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3a ExonRegion 0 0.63 0.00 1.95 0.00 0.00 1.12 0.00 5.73 9.18 2.69 6.86 0.00 3.06 0.30 2.90 1.21 4.10 3.53 9.61 4.00 12.90 1.47 3.24 24 E3_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 1.50 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 3.15 0.00 0.00 25 E3a_E3b KnownJunction 0 3.56 0.00 0.00 0.00 0.00 0.00 0.00 6.00 6.60 0.00 12.06 0.00 6.82 2.24 5.19 0.00 0.00 3.77 0.00 5.75 14.89 0.00 3.67 26 ER3b ExonRegion 0 0.03 0.77 4.09 0.28 0.00 5.34 0.85 4.73 5.27 2.67 1.03 0.00 1.25 0.02 0.04 0.04 0.79 8.16 1.05 1.64 2.71 0.50 0.56 27 E3_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER3c ExonRegion 0 2.50 1.11 6.26 1.21 1.56 2.19 0.51 8.89 12.69 4.61 5.61 0.00 2.77 2.63 1.91 0.61 3.75 6.94 9.46 6.06 11.14 2.12 1.38 29 E3b_E4a KnownJunction 0 0.00 0.00 7.13 1.50 0.00 0.00 0.00 1.68 5.41 0.00 4.74 0.00 0.00 0.00 0.00 0.00 0.00 5.14 14.02 0.00 2.47 0.00 0.00 30 E3c_E4a KnownJunction 0 2.96 0.00 0.00 1.47 4.07 0.00 0.00 7.35 3.50 0.00 0.00 0.00 0.00 0.00 0.00 4.36 8.42 2.57 3.76 6.33 8.77 0.00 0.00 31 ER3d ExonRegion 0 2.12 0.00 1.23 1.36 2.68 0.00 0.00 3.46 4.94 1.15 3.87 0.00 0.00 1.62 5.80 5.94 6.60 9.24 6.37 4.26 8.81 0.00 0.00 32 ER4a ExonRegion 0 4.56 0.00 2.72 0.45 1.25 11.45 0.97 3.07 6.12 0.05 1.93 0.00 0.00 1.26 2.00 4.49 2.71 10.92 15.57 2.93 4.80 1.76 4.70 33 E4_Da KnownBoundary 0 5.63 9.21 48.46 44.28 4.33 62.01 14.04 19.14 37.82 15.23 33.27 5.70 13.80 4.71 0.00 17.52 21.97 43.69 56.85 53.37 48.93 8.51 23.73 34 ER4b ExonRegion 0 0.41 0.00 0.27 0.80 0.00 5.65 0.39 2.76 9.13 0.75 3.38 0.00 0.00 0.25 0.00 0.08 1.65 5.21 1.50 0.89 7.07 1.85 1.31 35 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E4c_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER4c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 0.00 3.46 6.18 0.00 0.48 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 1.47 38 ER5a ExonRegion 0 1.81 1.59 2.12 1.26 0.00 27.58 2.80 3.76 13.11 1.47 3.75 0.00 0.00 3.29 0.00 2.55 0.42 6.35 3.51 0.00 8.54 0.89 8.29 39 E5a_E6a KnownJunction 0 0.00 2.63 0.00 0.00 0.00 0.00 0.00 12.57 9.49 1.67 2.26 0.00 0.00 0.00 0.00 0.00 0.00 2.11 9.60 0.00 20.82 0.00 4.10 40 E6_Aa NovelBoundary 0 0.00 0.00 1.15 1.56 0.00 116.58 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.58 0.00 0.00 0.00 0.00 0.00 0.00 41 ER6a ExonRegion 0 1.24 1.08 2.94 1.94 0.81 43.50 2.40 3.16 7.41 1.57 2.32 0.00 0.00 1.21 0.62 0.00 1.13 1.53 1.34 1.93 12.71 1.26 5.72 42 E6_Da KnownBoundary 0 0.00 3.35 1.48 0.00 0.00 35.38 0.00 0.00 1.68 2.63 0.00 0.00 0.00 0.00 0.00 0.00 3.55 0.00 0.00 0.00 6.05 0.00 0.00 43 E6a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER6b ExonRegion 0 12.24 1.19 4.06 0.74 1.18 69.83 4.04 4.81 7.08 2.58 6.80 0.00 0.00 1.30 0.90 2.61 5.61 5.32 4.20 4.68 15.29 2.75 9.70 45 E6_Ab KnownBoundary 0 11.19 0.00 3.67 1.86 4.24 40.72 1.99 6.28 3.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 6.12 0.00 4.35 46 ER6c ExonRegion 0 1.58 0.06 3.35 1.64 1.05 26.83 0.74 6.81 7.51 2.34 4.83 0.00 0.00 2.39 1.94 0.73 3.88 6.37 1.35 2.50 12.49 2.50 7.84 47 E6_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E6b_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER6d ExonRegion 0 3.42 0.89 2.79 3.79 0.29 45.12 8.93 2.76 5.53 3.01 3.08 0.00 0.00 0.37 3.39 0.56 0.95 4.39 1.48 3.83 9.21 2.10 9.39 50 E6_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER6e ExonRegion 0 6.66 0.14 3.81 2.55 3.70 41.30 4.82 1.15 4.46 4.78 3.75 0.00 0.00 2.61 2.79 0.00 2.36 1.83 1.59 3.65 11.52 4.56 4.26 52 E6_Dc KnownBoundary 0 17.93 0.00 1.83 1.96 8.40 28.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.50 0.00 0.00 0.00 0.00 0.00 0.00 8.11 53 E6c_E6d KnownJunction 0 3.63 0.00 3.49 1.90 0.00 0.00 0.00 0.00 0.00 0.00 2.68 5.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 ER6f ExonRegion 0 17.33 0.05 2.04 4.34 4.01 60.93 1.95 0.68 8.44 2.90 4.92 0.00 0.00 0.67 4.92 1.18 2.48 4.48 4.13 2.99 15.65 6.80 6.70 55 E6_Ad KnownBoundary 0 20.15 0.00 8.07 2.06 3.82 86.03 1.90 6.82 22.22 5.72 16.64 0.00 0.00 4.71 4.82 0.00 3.55 9.08 13.08 5.56 12.48 9.00 4.10 56 ER6g ExonRegion 0 6.18 0.72 3.59 1.96 1.27 40.60 5.12 0.54 13.38 1.74 8.66 0.00 0.00 1.49 1.98 1.12 1.39 1.89 5.71 2.70 16.00 5.43 5.48 57 E6d_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 ER7a ExonRegion 0 2.52 0.00 4.24 1.36 2.24 35.39 1.90 1.73 7.64 0.84 10.76 0.00 0.00 1.76 5.02 0.00 0.00 2.10 0.00 1.04 7.92 5.24 3.02 59 E7_Da NovelBoundary 0 0.00 0.00 1.83 2.06 3.99 64.05 0.00 2.22 3.85 4.22 10.11 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 3.13 5.62 0.00 0.00 60 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 ER8a ExonRegion 0 11.63 0.00 1.94 1.14 0.44 65.68 0.57 0.33 7.56 2.16 2.68 0.00 0.00 1.40 1.70 0.00 1.39 0.64 1.34 3.38 7.12 4.08 1.14 62 E8a_E9a KnownJunction 0 3.56 0.00 1.77 0.00 0.00 0.00 0.00 0.00 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 E8a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 ER9a ExonRegion 0 2.12 0.00 1.23 0.82 0.00 24.21 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER9b ExonRegion 0 1.25 0.00 0.71 1.36 1.87 42.43 0.00 2.37 1.30 0.00 0.00 0.00 0.00 0.09 0.00 0.00 0.00 0.00 0.00 0.00 1.90 0.40 0.00 66 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67 ER10a ExonRegion 0 13.71 0.00 0.88 2.75 1.53 56.90 0.34 2.89 5.75 1.18 0.70 0.00 0.00 0.98 0.00 1.03 0.00 0.00 0.00 0.74 5.28 2.69 0.00 68 E10a_E11a KnownJunction 0 23.93 0.00 1.80 7.39 7.98 85.29 0.00 2.51 7.93 2.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.46 0.00 0.00 69 ER11a ExonRegion 0 17.55 0.00 2.45 6.00 1.55 95.87 3.95 5.64 6.98 1.76 3.65 0.00 0.00 0.70 1.95 2.06 0.00 0.00 1.49 3.36 8.98 1.73 0.00 70 E11a_E12a KnownJunction 0 53.57 0.00 3.55 6.43 7.56 85.06 4.50 4.31 11.69 2.98 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 3.00 3.15 2.69 0.00 71 ER12a ExonRegion 0 8.75 0.00 3.28 5.98 0.94 44.89 0.00 6.30 6.42 1.16 3.52 0.00 0.00 1.52 0.79 0.66 1.20 2.01 0.43 5.87 10.45 2.72 1.07 72 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 ER13a ExonRegion 0 5.21 0.00 3.38 4.36 1.83 57.52 3.75 4.98 6.58 2.15 3.05 1.12 0.00 1.26 2.17 0.88 3.12 1.73 3.66 6.11 5.79 2.41 2.77 74 E13_Da KnownBoundary 0 36.60 23.15 23.36 11.05 4.33 38.73 19.92 11.05 11.34 18.59 13.21 0.00 7.79 2.47 4.45 8.29 13.37 23.88 23.53 12.21 5.99 9.37 4.01 75 ER13b ExonRegion 0 8.92 0.00 0.81 0.93 3.69 39.93 0.61 2.37 2.38 0.00 2.65 1.64 0.00 0.00 1.33 0.00 3.03 0.00 0.00 2.93 3.99 0.96 0.00