Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IFFO2 Gene 0 7.71 5.35 12.94 5.91 7.30 3.25 4.81 10.94 13.42 9.89 19.21 8.92 11.28 27.33 6.46 20.50 27.61 4.13 0.50 3.53 18.68 27.35 41.35 2 455833 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 304963 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 355609 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 416166 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 0.00 0.00 1.06 0.52 0.00 0.58 0.17 2.18 1.19 1.27 7.70 1.59 2.53 7.27 2.67 3.88 10.01 1.03 0.00 2.15 7.39 1.93 7.13 7 E1_Ab KnownBoundary 0 0.00 0.00 1.83 2.06 0.00 0.00 4.37 0.00 1.19 3.17 12.21 0.00 0.00 7.42 4.70 22.73 13.84 4.89 0.00 3.20 14.09 11.02 15.11 8 ER1b ExonRegion 1 1.42 1.36 3.39 0.93 0.90 1.85 0.84 5.31 4.16 3.19 12.50 1.94 7.99 23.81 5.84 4.01 37.63 2.44 0.13 2.16 12.34 8.58 30.62 9 E1_Ac NovelBoundary 0 18.23 3.35 46.69 25.04 0.00 5.79 0.00 37.01 33.94 38.63 20.16 6.30 18.67 38.44 5.32 8.03 36.84 38.14 9.60 9.78 62.64 17.94 65.13 10 E1a_E2a KnownJunction 0 9.56 0.00 11.89 7.13 4.07 0.00 3.89 28.22 11.14 13.40 32.43 6.30 7.30 27.90 8.90 31.27 54.04 4.27 13.55 2.49 11.24 27.98 58.39 11 ER1c ExonRegion 0 6.91 0.00 10.37 5.00 0.00 0.00 1.77 18.67 8.56 11.93 24.74 4.62 6.88 38.38 5.03 18.13 41.70 4.43 7.96 2.34 25.05 18.89 53.94 12 I1_AR5 ActiveIntronRegion 0 13.57 0.00 3.68 1.36 2.68 0.00 0.00 5.19 2.47 3.44 0.00 1.02 0.00 0.00 0.00 0.00 3.30 0.00 0.00 1.75 4.15 1.23 4.15 13 I1_SR3 SilentIntronRegion 0 2.30 0.81 2.92 2.30 2.01 0.24 0.62 3.60 4.48 1.02 0.77 3.22 5.20 0.34 0.22 3.40 1.98 0.31 0.00 0.57 2.94 1.80 15.99 14 I1_AR8 ActiveIntronRegion 0 6.18 1.22 5.10 4.03 4.99 0.63 1.92 5.42 6.02 2.24 1.20 0.00 0.14 1.28 0.64 3.75 5.13 0.57 0.00 1.27 4.02 2.59 11.44 15 I1_AR13 ActiveIntronRegion 0 3.44 0.00 8.58 0.00 5.35 0.00 2.65 3.46 5.71 2.29 1.93 0.00 0.00 2.03 0.00 2.97 5.36 0.00 0.00 0.00 6.61 2.08 10.28 16 ER2a ExonRegion 1 3.68 0.00 4.88 2.99 0.00 0.00 1.24 12.18 6.36 8.44 16.86 2.56 6.92 20.08 1.95 14.28 44.70 2.03 3.76 1.36 17.63 12.16 22.34 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 0.00 0.00 5.67 0.21 1.23 0.00 1.14 10.82 3.50 5.73 12.40 1.44 3.81 16.85 2.96 3.78 18.71 0.52 2.46 0.93 16.62 9.16 25.11 19 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER4a ExonRegion 0 0.00 0.42 2.16 1.32 0.00 1.99 0.18 2.29 1.06 1.41 0.66 2.58 2.59 7.07 0.00 3.10 0.00 0.64 1.20 0.00 1.39 2.45 10.60 22 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER5a ExonRegion 0 0.00 0.32 0.88 0.00 1.11 0.00 0.96 0.53 0.91 0.48 0.70 0.00 0.00 0.71 0.00 0.00 0.00 0.00 0.59 0.14 3.60 1.61 2.08 24 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER6a ExonRegion 0 2.78 1.38 0.00 0.00 0.00 0.00 0.56 0.00 0.56 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.88 2.48 26 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER7a ExonRegion 0 8.35 4.31 0.53 0.00 3.34 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 28 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER8a ExonRegion 0 9.63 1.99 1.41 0.53 1.92 1.67 1.73 2.39 4.20 2.86 5.77 5.39 3.33 15.01 3.61 9.44 10.99 1.14 0.00 0.76 2.98 10.02 12.13 30 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER9a ExonRegion 0 14.56 7.26 17.90 7.85 8.22 2.21 3.80 21.61 21.93 15.84 42.67 11.70 25.53 45.65 12.74 50.97 58.38 13.18 0.00 5.48 25.02 54.41 77.21 32 E9_Da KnownBoundary 0 10.67 9.47 36.72 10.75 23.43 0.00 1.68 33.11 26.07 19.90 36.90 16.81 27.27 61.57 9.39 51.52 34.13 20.02 0.00 12.14 25.39 75.56 125.91 33 ER9b ExonRegion 0 9.17 6.82 16.46 7.62 9.59 4.24 6.36 12.77 16.75 12.16 21.82 11.25 13.12 32.08 7.47 23.89 30.60 4.52 0.48 4.21 22.33 33.35 48.98