Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ALPL Gene 0 13.27 1.41 60.75 8.71 17.91 2.64 8.71 37.67 18.56 10.31 67.59 0.13 10.18 703.74 63.08 1.51 836.23 2.06 1.13 1.37 0.41 0.60 0.20 2 374840 Transcript 0 3.77 0.00 4.19 0.00 3.23 0.41 1.22 5.11 1.77 1.61 5.00 0.00 0.00 88.77 8.34 0.00 94.47 0.00 0.00 0.00 0.00 0.00 0.00 3 468526 Transcript 0 0.00 0.00 3.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.07 11.25 0.00 34.60 0.00 0.00 0.00 0.00 0.00 0.00 4 374832 Transcript 0 0.36 0.00 0.00 0.00 0.00 0.00 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.94 0.35 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 5 425315 Transcript 0 1.41 0.00 3.27 0.00 2.68 0.00 0.44 4.03 1.24 1.15 4.51 0.00 0.00 67.13 6.77 0.00 101.23 0.00 0.00 0.00 0.00 0.00 0.00 6 374830 Transcript 0 1.76 0.00 16.85 1.59 3.57 0.61 2.43 8.93 5.35 2.55 18.68 0.00 3.13 187.04 15.96 0.00 240.18 0.62 0.00 0.00 0.00 0.00 0.49 7 374829 Transcript 0 2.34 0.00 1.40 0.20 1.03 0.35 0.63 1.71 0.18 0.49 0.37 0.34 1.25 17.02 0.20 0.00 22.57 0.26 0.00 0.20 0.00 0.00 0.00 8 ER1a ExonRegion 0 1.14 0.00 0.00 0.00 0.00 0.00 0.92 0.00 0.00 0.00 0.00 0.00 0.00 11.18 0.67 0.00 3.05 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 9.86 0.86 12.15 0.90 10.50 0.78 8.69 8.43 1.92 1.77 18.17 0.00 0.00 251.94 20.99 2.53 347.53 1.17 0.00 2.71 0.00 0.00 0.00 10 E1a_E3b KnownJunction 0 7.33 0.00 12.57 0.00 7.89 0.00 1.85 15.32 5.30 4.84 15.00 0.00 0.00 218.32 24.35 0.00 273.77 0.00 0.00 0.00 0.00 0.00 0.00 11 E1a_E4a KnownJunction 0 0.00 0.00 3.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.07 11.25 0.00 34.60 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 0.72 0.00 0.00 0.00 0.00 0.00 0.45 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.70 0.00 4.51 0.00 0.00 0.00 0.00 0.00 0.00 13 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 1.41 0.00 3.27 0.00 2.68 0.00 0.44 4.03 1.24 1.15 4.51 0.00 0.00 67.13 6.77 0.00 101.23 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3b ExonRegion 0 4.30 0.00 30.31 2.93 5.45 1.26 0.55 21.70 9.40 7.52 44.10 0.00 4.52 407.00 30.46 0.96 610.67 0.37 0.33 1.65 0.00 0.65 0.00 16 E3a_E4a KnownJunction 0 18.89 0.00 70.52 9.62 7.64 2.38 3.67 27.56 8.10 11.55 48.91 0.00 6.66 666.43 56.12 14.61 765.40 1.95 4.52 3.26 0.00 0.00 0.00 17 ER4a ExonRegion 0 8.75 0.86 59.20 5.94 22.99 4.20 11.35 30.44 17.48 13.55 91.10 0.00 8.75 683.31 68.64 5.33 949.53 3.02 0.90 2.25 0.00 0.57 0.00 18 E4a_E5a KnownJunction 0 3.78 0.00 64.40 8.52 8.40 2.61 20.89 28.14 10.53 14.69 104.55 0.00 5.84 641.36 76.64 3.50 972.14 0.00 0.00 5.82 0.00 5.57 0.00 19 ER5a ExonRegion 0 15.09 0.79 63.02 7.98 4.31 2.34 5.24 32.32 11.01 11.90 80.22 0.00 12.17 766.57 69.33 2.77 891.53 1.39 0.00 2.82 0.97 2.16 0.00 20 E5a_E6a KnownJunction 0 19.48 2.43 55.97 13.22 11.46 2.90 2.08 38.40 26.48 13.89 115.98 0.00 13.47 1030.08 98.28 4.36 981.67 6.01 0.00 0.00 0.00 0.00 0.00 21 ER6a ExonRegion 0 8.48 0.07 46.40 7.32 14.20 4.22 6.98 30.20 20.88 7.71 67.94 0.00 7.96 721.80 68.29 1.95 737.10 3.75 1.86 1.95 0.00 2.11 0.00 22 E6a_E7a KnownJunction 0 20.23 0.00 68.39 12.12 30.22 5.22 23.45 43.83 20.83 10.31 57.38 0.00 19.97 908.30 81.96 3.93 906.68 6.55 0.00 2.43 0.00 3.12 0.00 23 ER7a ExonRegion 0 14.52 1.14 67.43 7.48 15.91 3.65 8.19 47.57 23.09 13.41 77.04 0.00 15.55 842.14 73.70 2.10 1012.60 6.53 0.95 1.61 0.00 1.12 0.00 24 E7_Da NovelBoundary 0 0.00 0.00 40.06 4.00 10.19 2.27 5.30 29.45 14.99 4.27 41.69 0.00 5.68 296.02 22.75 0.00 536.51 8.25 0.00 2.56 0.00 0.00 0.00 25 E7b_E8a KnownJunction 0 20.45 6.18 83.94 6.33 41.43 7.04 13.60 71.10 31.89 14.42 92.18 0.00 6.82 970.28 77.88 0.00 1382.61 14.34 0.00 2.75 0.00 5.27 0.00 26 ER7b ExonRegion 0 15.66 4.07 72.54 6.81 26.76 5.50 9.53 56.69 28.16 9.86 105.15 0.00 7.50 989.74 77.75 0.00 1349.41 12.56 0.00 2.13 0.00 4.17 0.00 27 ER8a ExonRegion 0 20.50 0.66 89.27 5.92 22.20 4.36 12.10 51.36 28.71 16.32 103.52 0.00 17.65 998.16 86.15 4.21 1293.01 4.43 1.13 3.95 0.78 1.87 0.20 28 E8a_E9b KnownJunction 0 12.82 0.00 103.34 9.69 28.86 0.00 14.71 55.82 34.92 6.98 109.40 0.00 0.00 1151.75 130.79 0.00 1028.33 3.86 0.00 0.00 0.00 0.00 3.50 29 ER9a ExonRegion 0 3.53 0.00 31.86 3.18 7.14 1.22 4.85 17.86 10.70 3.44 37.37 0.00 6.25 374.09 31.91 0.00 429.12 1.23 0.00 0.00 0.00 0.00 0.98 30 ER9b ExonRegion 0 14.23 0.85 98.58 11.40 22.69 2.55 16.18 49.22 24.58 11.42 105.22 0.00 12.85 1033.76 78.46 2.54 1181.34 5.33 0.88 0.40 0.00 1.54 1.70 31 E9a_E10a KnownJunction 0 21.93 3.35 105.05 14.05 22.67 0.00 22.83 64.61 28.88 12.25 87.81 0.00 19.64 1183.12 115.46 7.52 1123.70 4.73 4.71 2.81 0.00 0.00 0.00 32 E9a_E12a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 51.24 0.00 0.00 0.00 0.00 0.00 0.00 33 ER10a ExonRegion 0 12.61 3.22 86.82 13.14 17.05 3.63 16.65 64.80 33.04 13.13 91.26 0.00 18.17 1052.33 82.93 0.95 1151.89 2.79 1.53 0.60 1.67 0.79 0.35 34 E10a_E12a KnownJunction 0 10.45 2.43 102.15 16.61 46.86 2.61 20.40 70.20 33.54 14.72 111.77 0.00 6.82 1059.34 93.33 0.00 1429.17 0.00 4.61 0.00 0.00 0.00 4.01 35 ER11a ExonRegion 0 1.04 0.00 2.80 0.41 2.05 0.70 1.27 3.42 0.35 0.97 0.75 0.68 2.50 34.04 0.39 0.00 45.15 0.53 0.00 0.41 0.00 0.00 0.00 36 E11a_E12a KnownJunction 0 3.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER12a ExonRegion 0 17.95 2.66 113.24 19.26 28.67 1.81 11.64 70.63 37.22 18.95 113.99 0.99 14.12 1102.36 98.98 2.37 1352.51 3.50 2.84 1.13 0.59 0.55 0.54 38 E12a_E13a KnownJunction 0 35.64 6.31 103.99 25.07 39.30 8.57 10.29 70.57 34.81 18.05 148.46 5.70 28.24 1037.32 55.26 0.00 1546.89 1.87 0.00 0.00 0.00 0.00 0.00 39 ER13a ExonRegion 0 23.02 3.30 109.37 18.48 21.92 3.87 9.07 53.94 27.80 17.68 119.44 0.25 14.19 1020.87 91.63 1.86 1264.33 3.46 1.35 1.26 0.94 0.00 0.00 40 E13a_E14a KnownJunction 0 48.60 9.54 118.06 13.55 35.40 0.00 8.26 64.20 38.57 17.38 134.03 0.00 19.48 1133.68 103.34 7.60 1437.21 5.10 0.00 3.26 0.00 0.00 0.00 41 ER14a ExonRegion 0 18.78 1.82 75.35 11.34 15.49 2.44 8.21 39.34 17.21 9.56 69.25 0.00 6.81 764.97 76.37 1.10 865.82 1.82 0.92 2.05 0.32 0.30 0.00 42 E14_Da KnownBoundary 0 13.93 2.63 61.26 13.15 52.04 5.79 12.19 34.83 12.50 3.71 29.95 0.00 6.01 662.14 62.06 0.00 602.80 1.95 0.00 0.00 0.00 0.00 0.00 43 ER14b ExonRegion 0 24.46 2.25 94.03 13.59 32.78 4.85 15.64 62.45 30.54 15.13 100.64 0.00 14.55 1085.67 84.11 0.54 1278.90 0.34 2.44 1.54 0.00 0.38 0.00 44 E14_Db KnownBoundary 0 49.27 6.31 186.42 19.31 50.00 2.90 33.03 107.08 55.27 29.20 116.24 0.00 34.58 1245.16 88.76 0.00 1969.80 0.00 3.86 0.00 0.00 0.00 0.00 45 ER14c ExonRegion 0 13.73 2.48 57.08 10.70 32.32 2.46 11.00 40.93 19.28 11.23 63.62 0.00 15.23 770.69 80.94 0.78 869.82 0.73 1.60 0.00 1.16 0.00 0.78 46 ER14d ExonRegion 0 17.99 0.20 5.02 1.64 24.35 1.83 3.18 1.38 1.61 1.03 4.06 0.00 0.00 174.59 10.44 0.00 95.07 0.00 0.00 0.00 0.00 0.00 0.00 47 ER14e ExonRegion 0 2.82 0.00 0.00 0.00 1.78 1.22 0.88 0.00 0.00 0.00 0.00 0.00 0.00 36.81 0.00 0.00 6.60 0.00 0.00 0.00 0.00 0.00 0.00