Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PINK1 Gene 0 11.85 8.66 28.79 20.76 13.07 35.66 16.60 38.63 75.60 30.87 4.79 3.16 4.68 5.83 8.81 6.61 5.88 17.95 6.92 10.30 53.97 37.64 36.45 2 321556 Transcript 0 18.00 24.78 72.74 38.56 32.79 82.82 32.88 95.35 195.36 74.25 10.97 5.27 10.48 20.52 15.03 13.68 12.74 40.23 17.21 20.40 162.63 97.90 91.49 3 492302 Transcript 0 4.03 1.60 1.48 2.74 3.03 3.74 5.11 4.08 5.16 1.71 0.53 2.10 2.48 1.59 2.32 1.43 2.36 3.16 1.86 2.34 3.82 3.07 4.12 4 400490 Transcript 0 6.51 2.11 10.77 3.99 6.16 5.74 2.62 7.96 8.46 9.00 0.69 0.16 0.44 1.47 2.19 5.89 2.24 3.45 0.84 1.08 5.49 4.64 4.16 5 ER1a ExonRegion 0 3.67 7.62 26.08 11.69 4.58 29.07 10.61 28.86 62.31 23.81 4.48 1.36 1.63 5.18 9.33 7.47 3.38 9.33 3.77 8.94 59.14 28.75 27.62 6 E1a_E2a KnownJunction 0 31.71 37.69 131.34 39.52 43.97 103.86 34.31 138.62 283.50 82.28 9.69 12.75 0.00 29.37 20.03 24.52 9.26 61.31 16.47 31.70 183.29 111.44 127.28 7 ER2a ExonRegion 0 26.91 27.50 108.93 70.86 40.70 127.28 50.65 147.54 308.99 134.46 18.78 5.95 11.01 27.06 22.44 24.25 21.03 76.90 26.48 36.86 235.33 164.01 148.56 8 E2a_E2c KnownJunction 0 27.71 51.11 97.34 70.75 74.70 153.89 68.85 161.75 321.99 130.68 21.90 6.30 39.77 40.97 23.36 12.13 30.01 53.60 39.34 24.48 335.39 185.29 154.00 9 ER2b ExonRegion 0 6.13 2.56 2.65 5.25 4.92 5.59 9.27 6.55 7.91 3.14 1.02 4.18 4.91 3.03 4.50 2.84 4.51 4.61 3.24 4.58 7.21 4.51 7.23 10 E2_Ac KnownBoundary 0 3.63 0.00 1.30 6.76 0.00 5.79 0.00 6.82 6.71 0.00 0.00 6.75 6.82 0.00 0.00 0.00 0.00 2.57 0.00 0.00 5.31 0.00 0.00 11 ER2c ExonRegion 0 25.80 35.32 119.07 81.32 72.62 178.43 62.54 172.45 346.20 144.67 27.51 8.18 15.81 20.58 29.22 25.95 20.14 91.69 32.36 42.13 294.90 194.06 187.48 12 E2b_E3a KnownJunction 0 70.53 64.73 178.47 124.33 137.61 329.30 93.40 230.30 478.09 227.41 38.01 12.15 26.78 20.01 48.33 108.77 31.42 159.64 119.63 62.13 349.97 392.57 424.77 13 Ix_AR1 ActiveIntronRegion 0 17.04 0.00 1.14 5.95 12.49 13.69 20.54 11.70 9.96 9.65 0.00 0.00 3.28 0.00 6.24 7.93 10.84 4.19 11.63 5.57 4.59 9.31 6.41 14 E3_Aa NovelBoundary 0 77.20 9.21 12.06 25.80 42.28 45.71 28.18 36.68 31.39 14.42 0.00 6.30 13.31 2.35 0.00 15.21 4.77 15.96 0.00 8.44 5.87 2.76 23.65 15 ER3a ExonRegion 0 51.31 35.77 140.69 90.87 51.94 168.60 69.20 174.21 337.21 148.12 24.06 10.79 20.96 23.86 42.49 41.53 27.24 84.00 38.69 48.89 280.18 198.75 184.16 16 E3_Da NovelBoundary 0 3.41 0.00 3.49 11.09 11.97 13.69 21.29 6.24 4.34 12.97 0.00 5.40 13.31 2.30 4.45 7.35 0.00 2.45 9.60 0.00 7.66 3.06 3.84 17 E3a_E4b KnownJunction 0 73.72 48.28 148.84 90.33 74.87 209.48 54.89 197.07 366.23 160.90 29.59 0.00 20.78 18.95 4.45 54.52 18.70 107.45 49.41 52.22 273.80 201.95 231.33 18 Ix Intron 0 8.64 0.97 4.86 10.80 15.50 14.98 26.53 10.76 7.87 13.15 1.65 3.82 4.30 1.65 4.68 7.62 3.13 4.10 3.63 2.83 4.60 3.96 2.51 19 Ix_AR1 ActiveIntronRegion 0 9.88 1.23 4.09 12.20 14.09 12.70 28.00 10.98 9.68 16.19 2.55 3.84 4.43 1.75 5.46 7.40 3.29 4.71 4.18 2.66 6.79 4.13 2.89 20 Ix_SR1 SilentIntronRegion 0 7.00 0.61 5.97 8.96 17.60 18.28 24.72 10.56 5.42 9.04 0.42 3.83 4.15 1.52 3.65 8.00 2.95 3.30 2.90 3.09 1.60 3.76 2.01 21 ER4a ExonRegion 0 6.51 2.11 10.77 3.99 6.16 5.74 2.62 7.96 8.46 9.00 0.69 0.16 0.44 1.47 2.19 5.89 2.24 3.45 0.84 1.08 5.49 4.64 4.16 22 E4_Ab KnownBoundary 0 6.74 3.29 11.71 6.06 0.00 2.21 0.00 9.41 3.59 15.53 0.00 0.00 0.00 0.00 0.00 4.27 4.77 4.97 0.00 0.00 0.00 2.76 0.00 23 ER4b ExonRegion 0 54.61 35.29 115.43 84.89 65.30 151.95 60.13 144.41 275.32 119.79 20.62 8.63 12.63 16.95 32.39 23.98 15.27 63.13 23.86 37.84 190.36 134.19 134.65 24 E4_Da NovelBoundary 0 6.89 2.96 0.00 1.73 23.09 5.56 5.61 4.56 5.76 6.93 0.00 0.00 6.82 2.18 0.00 11.45 4.30 1.87 0.00 2.81 6.05 0.00 4.35 25 E4a_E5a KnownJunction 0 46.60 34.60 116.94 101.19 63.16 186.09 79.80 179.16 273.38 132.08 14.42 25.21 13.64 18.89 31.77 24.95 17.30 71.22 9.41 30.68 196.82 126.69 121.47 26 Ix Intron 0 17.53 9.27 4.59 8.13 20.92 16.73 18.11 19.66 8.91 12.72 4.50 6.61 7.27 9.27 12.88 15.49 13.82 3.94 4.15 5.15 12.51 7.17 10.11 27 Ix_AR2 ActiveIntronRegion 0 39.79 20.93 10.25 17.58 32.02 30.18 29.22 43.99 18.95 27.18 10.40 11.86 9.53 18.78 24.59 34.19 27.80 7.96 9.69 8.06 23.50 15.11 16.41 28 E5_Aa NovelBoundary 0 52.38 22.43 25.28 57.20 38.96 62.07 58.87 65.31 34.64 60.71 28.38 6.00 25.81 27.43 37.21 33.15 37.87 23.13 13.27 15.21 49.05 14.57 27.40 29 ER5a ExonRegion 0 25.23 21.97 85.11 59.23 26.19 86.52 32.67 110.38 205.35 86.11 6.89 5.99 7.40 8.49 12.13 3.88 7.38 36.41 5.55 20.11 105.50 63.79 72.41 30 E5_Da KnownBoundary 0 9.41 0.00 11.41 28.63 4.16 19.08 2.25 30.93 23.32 32.66 5.16 0.00 12.66 7.18 14.09 27.34 35.90 7.17 16.66 5.88 18.04 15.74 10.16 31 E5a_E5b KnownJunction 0 29.19 38.94 115.49 96.69 62.39 112.04 36.35 144.74 272.62 110.38 22.53 6.30 19.32 14.19 72.32 3.42 16.46 62.18 8.75 38.09 156.30 155.66 126.68 32 ER5b ExonRegion 0 1.94 0.65 0.30 0.23 1.14 1.88 0.94 1.60 2.42 0.28 0.04 0.01 0.05 0.16 0.14 0.02 0.22 1.70 0.47 0.09 0.43 1.63 1.01 33 E5_Ab KnownBoundary 0 27.56 3.22 0.00 1.66 12.48 23.28 24.51 7.89 4.37 7.79 5.37 0.00 6.33 2.65 0.00 7.43 8.98 6.63 0.00 0.00 0.00 0.00 7.60 34 ER5c ExonRegion 0 24.12 17.41 65.71 50.16 24.09 69.54 30.23 83.73 174.56 58.82 7.20 2.05 5.37 6.45 18.22 4.72 5.50 34.87 9.70 14.08 71.07 74.59 63.18 35 E5_Db NovelBoundary 0 25.41 13.94 15.58 26.57 13.75 43.72 29.46 28.96 37.79 75.54 11.69 11.25 33.76 19.01 28.18 11.79 21.60 17.78 12.42 6.20 66.29 20.76 25.78 36 E5b_E6a KnownJunction 0 96.46 56.31 116.35 98.62 125.89 179.33 56.84 191.20 357.95 122.17 19.64 6.15 26.62 18.36 57.48 7.60 17.20 81.58 41.41 36.18 196.82 176.05 179.35 37 E6_Aa NovelBoundary 0 17.34 12.23 26.37 29.30 47.37 44.52 65.45 54.83 58.22 82.63 33.48 12.15 38.80 29.20 47.10 39.05 101.54 11.32 24.09 21.41 80.43 26.82 19.12 38 ER6a ExonRegion 0 6.83 3.07 8.03 7.52 3.85 11.35 4.08 12.36 25.39 7.93 0.74 0.12 0.33 0.70 1.96 0.41 1.01 3.98 1.00 1.71 10.70 9.91 9.40 39 E6_Da KnownBoundary 0 3.48 31.11 1.39 8.32 22.84 58.21 35.77 16.39 11.92 6.69 0.00 24.61 40.42 3.00 8.90 8.72 9.26 2.16 4.80 2.43 0.00 2.45 7.94 40 ER6b ExonRegion 0 0.59 0.00 0.00 0.70 0.00 0.00 0.74 2.14 1.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.61 0.00 0.00 41 ER6c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00