Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MAN1C1 Gene 0 31.45 2.99 4.20 5.71 17.30 7.91 10.45 18.95 16.05 3.45 1.61 3.90 7.38 8.24 6.16 4.49 6.85 3.64 3.91 4.21 12.66 16.73 17.18 2 374331 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 374332 Transcript 0 30.60 4.97 4.57 6.01 12.56 9.45 9.32 20.80 16.92 4.00 1.23 5.86 8.95 5.80 8.73 5.69 5.03 4.20 5.66 6.33 9.39 15.80 15.69 4 263979 Transcript 0 0.86 0.00 0.00 0.00 1.09 0.00 0.17 0.35 0.25 0.22 0.00 0.00 0.00 0.00 0.00 0.40 0.00 0.00 0.00 0.00 0.01 0.57 0.40 5 473891 Transcript 0 7.66 0.17 0.47 1.12 4.09 0.16 3.30 5.11 4.21 0.56 0.10 0.55 2.02 0.72 0.50 0.26 0.51 0.59 0.27 0.07 1.25 1.07 2.05 6 374329 Transcript 0 17.85 15.17 8.22 6.95 15.05 9.54 22.15 5.80 7.85 6.57 5.53 13.84 19.20 8.69 15.57 21.61 17.50 13.06 16.29 23.65 8.67 8.99 19.55 7 496532 Transcript 0 5.20 1.66 0.00 0.00 1.53 1.46 2.64 2.42 1.40 0.10 0.65 2.29 3.64 2.29 1.40 1.54 3.42 0.19 0.43 2.94 0.74 1.21 3.48 8 475314 Transcript 0 1.56 0.00 0.00 0.00 1.95 0.00 0.47 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.80 0.76 1.07 9 487493 Transcript 0 17.98 0.00 2.07 0.49 4.29 1.28 4.26 4.40 2.83 0.40 0.00 0.80 2.15 1.91 0.77 0.03 0.65 0.64 0.04 0.00 1.20 2.40 2.33 10 IG17_AR1 ActiveIntergenicRegion 0 10.56 0.00 0.46 0.76 10.89 0.93 4.26 3.43 3.96 0.00 0.00 0.90 3.23 1.64 9.08 3.65 4.18 0.00 0.00 0.00 2.18 3.02 3.24 11 ER1a ExonRegion 0 0.56 0.00 1.46 1.42 1.07 2.88 0.53 5.45 4.07 1.59 0.00 0.47 1.03 4.49 2.14 0.40 3.04 2.93 0.00 0.28 9.83 5.48 12.38 12 E1_Ab KnownBoundary 0 2.74 0.00 0.00 0.00 0.00 5.45 0.00 3.90 9.92 0.00 0.00 0.00 0.00 4.59 0.00 0.00 0.00 2.40 0.00 0.00 11.80 17.94 4.35 13 ER1b ExonRegion 0 9.57 0.38 0.58 1.63 3.90 5.42 3.74 12.40 7.30 2.20 1.72 0.69 3.64 9.62 2.02 2.18 7.96 1.93 0.86 0.45 13.54 9.22 13.16 14 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1a_E3a KnownJunction 0 18.23 6.71 0.00 4.36 12.14 0.00 11.70 34.17 28.67 8.84 5.05 0.00 0.00 16.89 8.90 0.00 0.00 5.31 4.80 0.00 44.67 21.92 39.18 16 I1_AR5 ActiveIntronRegion 0 14.29 0.00 0.00 1.36 7.02 0.00 8.11 0.43 2.01 0.00 0.00 0.00 0.00 0.00 2.90 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 I1_AR6 ActiveIntronRegion 0 12.06 0.44 1.33 0.44 10.07 0.40 6.43 5.92 3.90 0.68 0.31 0.00 0.84 0.00 0.52 2.38 3.00 0.60 0.00 0.00 0.64 0.00 0.78 18 ER2a ExonRegion 0 2.59 0.00 0.00 0.00 3.28 0.00 0.52 1.05 0.75 0.65 0.00 0.00 0.00 0.00 0.00 1.21 0.00 0.00 0.00 0.00 0.02 1.70 1.20 19 E2_Da NovelBoundary 0 17.78 0.00 0.00 0.00 0.00 0.00 0.00 11.25 3.21 0.00 0.00 0.00 0.00 4.94 0.00 3.16 0.00 0.00 0.00 0.00 0.00 0.00 4.35 20 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER3a ExonRegion 0 27.58 2.00 1.21 8.42 23.19 13.13 9.94 28.45 24.21 8.28 3.41 0.34 2.61 23.77 8.66 3.59 7.81 7.27 3.89 0.00 29.45 33.37 29.79 22 E3_Ab KnownBoundary 0 60.97 0.00 3.25 15.92 36.33 25.89 12.54 22.14 25.23 6.85 2.53 0.00 6.33 26.84 4.45 14.95 12.62 0.00 8.56 0.00 27.80 35.58 47.12 23 ER3b ExonRegion 0 35.23 0.00 3.50 13.63 16.84 20.98 11.88 23.23 27.79 6.58 0.91 4.33 8.00 29.57 5.21 10.23 21.36 0.92 11.06 0.00 38.82 36.52 24.36 24 E3a_E5a KnownJunction 0 23.34 0.00 3.43 8.82 3.48 30.27 12.54 24.44 34.17 8.38 0.00 0.00 14.45 37.38 0.00 3.59 21.69 4.15 16.75 0.00 50.35 38.64 16.48 25 ER4a ExonRegion 0 35.70 30.33 16.44 13.90 30.10 19.09 44.30 11.59 15.71 13.14 11.06 27.69 38.41 17.38 31.14 43.21 35.00 26.12 32.57 47.29 17.35 17.98 39.09 26 E4_Da NovelBoundary 0 10.52 0.00 0.00 1.96 20.63 0.00 3.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 0.00 0.00 27 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5a ExonRegion 0 20.33 0.00 4.98 6.51 16.29 13.28 13.24 26.18 38.08 9.41 0.85 0.11 6.23 19.43 5.50 0.72 5.07 3.49 5.03 2.81 47.66 36.91 33.24 29 E5a_E6a KnownJunction 0 21.41 0.00 2.90 11.49 12.39 7.15 15.99 22.71 40.28 9.11 0.00 0.00 8.28 29.20 19.28 4.10 11.69 2.36 0.00 0.00 57.82 46.78 28.51 30 ER6a ExonRegion 0 33.34 0.00 6.60 8.97 30.23 18.88 10.72 22.00 38.06 9.57 1.22 2.19 8.40 25.62 12.29 1.25 6.81 4.01 6.06 2.68 49.00 58.11 22.15 31 E6a_E7a KnownJunction 0 64.83 0.00 12.65 13.78 31.49 19.02 19.70 23.86 45.83 5.56 0.00 11.70 6.82 29.20 0.00 0.00 9.16 8.12 16.38 0.00 37.07 69.87 40.29 32 ER7a ExonRegion 0 43.00 2.18 5.07 11.12 27.77 22.24 14.61 19.25 36.98 3.92 2.03 1.96 8.94 21.93 10.54 0.78 11.26 12.43 1.68 1.14 32.73 53.69 54.13 33 E7a_E8a KnownJunction 0 53.57 0.00 6.00 9.26 19.69 19.02 19.08 13.76 35.62 7.31 2.16 0.00 0.00 27.31 17.80 4.36 8.42 2.07 0.00 0.00 44.05 33.86 19.72 34 ER8a ExonRegion 0 47.64 0.29 4.44 10.78 29.86 12.71 21.78 29.82 35.77 5.35 4.46 0.77 6.08 25.39 12.79 0.76 22.66 2.36 0.22 0.00 30.91 56.54 32.18 35 E8_Da KnownBoundary 0 3.11 0.00 0.00 0.00 3.82 0.00 1.94 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.45 36 E8a_E10a KnownJunction 0 98.09 3.16 2.96 17.38 53.23 16.64 28.66 38.16 51.16 10.56 2.42 6.30 0.00 22.78 4.45 0.00 9.35 8.50 3.67 0.00 51.40 43.84 57.71 37 E8_Db KnownBoundary 0 6.30 0.00 0.00 0.00 0.00 0.00 0.00 2.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 0.00 38 E8b_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER8b ExonRegion 0 4.23 0.00 0.00 0.00 0.00 0.00 1.32 1.73 1.24 0.00 0.00 0.00 4.69 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 2.08 5.87 40 ER8c ExonRegion 0 7.66 0.17 0.47 1.12 4.09 0.16 3.30 5.11 4.21 0.56 0.10 0.55 2.02 0.72 0.50 0.26 0.51 0.59 0.27 0.07 1.25 1.07 2.05 41 E8_Dc NovelBoundary 0 567.58 552.01 1460.77 1611.75 438.79 350.03 547.79 1707.94 1676.08 1291.71 226.53 127.69 182.46 81.70 173.44 576.26 600.84 2319.90 504.86 646.07 197.13 193.93 673.26 42 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER10a ExonRegion 0 71.40 0.74 9.57 19.25 38.29 27.70 13.80 42.66 49.92 4.01 4.69 2.30 4.19 22.86 12.87 4.71 16.68 3.11 1.46 0.00 42.97 52.64 53.14 45 E10_Da NovelBoundary 0 18.00 0.00 2.72 4.76 7.22 0.00 3.62 6.24 2.84 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 2.78 2.45 4.35 46 E10a_E11a KnownJunction 0 58.60 0.00 2.84 12.72 37.35 21.46 4.28 41.73 51.76 0.00 2.26 6.30 0.00 13.89 30.41 0.00 24.96 0.00 0.00 0.00 22.05 39.19 38.93 47 ER11a ExonRegion 0 62.27 0.00 8.93 17.62 45.26 14.77 19.38 46.85 42.35 8.49 1.35 8.36 9.95 26.99 10.53 0.74 16.36 1.77 3.35 0.00 34.86 53.00 51.95 48 E11a_E15a KnownJunction 0 89.72 0.00 2.72 20.54 48.73 5.79 25.79 42.76 42.01 6.45 2.58 5.85 0.00 31.96 13.35 7.78 12.25 3.56 7.81 0.00 20.57 54.74 53.61 49 ER12a ExonRegion 0 3.87 0.00 0.00 0.00 2.04 1.12 1.61 3.16 2.80 0.52 0.29 0.00 0.00 0.79 0.62 0.00 4.02 0.00 0.48 0.32 1.34 2.85 3.57 50 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 I12_AR1 ActiveIntronRegion 0 2.12 0.00 0.00 1.36 2.68 0.00 3.97 6.91 2.68 0.00 0.00 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 2.20 6.25 11.75 52 E13_Aa NovelBoundary 0 10.67 28.68 23.48 40.79 32.43 22.83 62.18 46.25 25.87 29.23 14.69 20.26 0.00 4.65 17.80 29.39 26.74 52.52 21.65 28.51 17.85 11.70 41.15 53 ER13a ExonRegion 0 15.44 8.30 0.00 0.00 5.62 3.78 11.56 2.01 0.96 0.00 2.96 11.44 18.19 8.20 6.39 7.70 8.59 0.94 1.66 14.39 2.34 3.21 13.84 54 E13_Da NovelBoundary 0 38.53 45.98 113.63 138.54 32.94 22.66 89.69 112.95 128.01 95.31 11.95 17.41 28.57 6.65 35.23 34.52 53.48 123.61 40.00 76.76 23.29 2.33 12.46 55 E13a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER14a ExonRegion 0 3.11 0.00 0.00 0.00 3.90 0.00 0.95 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 0.00 0.00 0.00 0.00 1.61 1.52 2.14 57 E14_Da NovelBoundary 0 13.71 0.00 0.00 0.00 12.48 0.00 0.00 3.70 2.72 1.67 0.00 11.10 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 2.66 0.00 3.93 58 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E15_Aa NovelBoundary 0 20.89 0.00 0.00 2.06 4.33 0.00 4.28 2.09 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 8.60 0.00 0.00 0.00 3.09 0.00 7.77 60 ER15a ExonRegion 0 69.24 0.55 2.76 11.50 25.36 14.96 15.11 40.16 37.23 4.83 2.11 4.51 5.48 18.32 8.77 4.32 10.07 3.51 4.59 0.01 31.08 31.81 34.61 61 E15a_E16b KnownJunction 0 70.16 0.00 5.26 10.39 15.45 14.37 25.39 31.63 49.31 2.66 0.00 0.00 13.64 4.53 0.00 7.69 8.70 5.76 13.37 0.00 32.00 11.51 35.94 62 E15a_E18a KnownJunction 0 6.67 0.00 0.00 0.00 0.00 2.38 0.00 4.39 3.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 0.00 0.00 0.00 0.00 0.00 0.00 63 I15 Intron 0 11.01 0.00 0.39 0.56 4.83 3.31 2.55 5.12 3.15 0.84 0.30 0.55 1.44 1.76 0.38 0.00 0.71 0.59 0.10 0.20 1.28 3.76 3.05 64 I15_AR1 ActiveIntronRegion 0 23.54 0.00 2.87 0.64 5.30 0.58 3.33 0.13 0.18 0.53 0.00 0.00 0.00 1.87 0.00 0.00 0.55 0.00 0.00 0.00 1.78 4.60 4.60 65 E16_Aa NovelBoundary 0 16.97 0.00 3.67 1.66 17.06 0.00 0.00 5.50 3.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 3.24 66 ER16a ExonRegion 0 17.98 0.00 2.07 0.49 4.29 1.28 4.26 4.40 2.83 0.40 0.00 0.80 2.15 1.91 0.77 0.03 0.65 0.64 0.04 0.00 1.20 2.40 2.33 67 E16_Ab KnownBoundary 0 14.08 0.00 0.00 0.00 0.00 0.00 0.00 2.38 4.66 0.00 0.00 0.00 0.00 0.00 4.45 0.00 3.83 0.00 0.00 0.00 0.00 0.00 4.01 68 ER16b ExonRegion 0 61.78 1.27 7.87 16.14 21.44 7.79 15.83 45.79 38.46 6.33 2.10 1.12 5.61 21.04 12.48 4.52 8.97 5.07 5.30 0.43 38.23 37.47 39.29 69 E16_Da NovelBoundary 0 59.49 0.00 5.85 13.42 21.73 2.33 5.34 26.94 23.67 3.09 0.00 0.00 0.00 11.18 5.07 3.50 7.67 5.10 3.48 2.62 19.83 29.70 45.41 70 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 E16b_E18a KnownJunction 0 143.73 0.00 15.85 24.01 48.22 23.51 18.02 57.59 40.05 7.66 7.26 0.00 6.82 24.07 17.80 4.36 15.99 9.99 17.79 2.56 36.76 44.15 56.00 72 ER16c ExonRegion 0 115.47 0.00 11.71 22.11 38.06 18.54 15.89 50.89 43.23 6.63 5.80 0.00 4.69 22.38 14.51 2.97 13.20 9.24 12.74 2.13 42.36 57.64 67.22 73 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74 ER17a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.18 0.00 0.00 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 ER18a ExonRegion 0 168.83 1.79 10.11 21.28 28.14 21.42 22.12 62.87 54.44 8.00 2.63 0.41 5.18 20.93 10.10 2.41 8.88 8.49 4.64 0.17 42.42 43.27 45.90 76 E18a_E19a KnownJunction 0 188.11 0.00 9.02 26.84 56.20 52.64 37.01 73.15 61.08 6.53 2.11 6.30 6.17 28.49 4.45 4.36 13.56 0.00 0.00 0.00 55.41 60.07 46.78 77 E19_Aa NovelBoundary 0 27.12 0.00 0.00 0.00 14.43 2.90 2.25 3.94 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.71 78 ER19a ExonRegion 0 124.25 1.65 11.50 15.00 70.23 29.28 28.15 61.17 45.03 6.26 2.79 3.31 8.38 28.18 11.13 3.98 17.44 4.91 3.10 0.69 55.44 45.96 55.94 79 E19_Da KnownBoundary 0 85.57 0.00 2.99 13.12 171.73 17.72 34.67 85.76 36.37 7.12 2.47 6.30 14.93 31.08 8.90 0.00 21.32 6.80 0.00 0.00 47.45 64.72 30.82 80 ER19b ExonRegion 0 165.43 0.66 12.86 19.59 112.41 29.20 30.37 104.33 67.41 10.45 4.06 9.39 27.71 25.55 14.87 3.83 18.48 2.33 2.57 0.34 30.11 76.16 55.57 81 E19_Db KnownBoundary 0 50.68 0.00 3.37 8.52 72.50 9.99 29.85 55.61 47.19 8.30 0.00 12.60 21.43 4.47 5.19 0.00 8.13 0.00 0.00 0.00 2.66 61.36 18.61 82 ER19c ExonRegion 0 37.66 0.01 10.06 6.91 37.16 8.25 12.87 37.10 27.13 2.19 0.62 7.40 13.24 7.73 4.74 0.02 3.72 0.00 2.54 0.00 3.93 40.47 12.14 83 E19_Dc KnownBoundary 0 71.27 0.00 14.13 3.23 48.47 15.50 9.01 4.23 17.27 1.05 0.00 0.00 0.00 4.94 0.00 0.00 0.00 0.00 4.80 0.00 2.84 23.21 12.63 84 ER19d ExonRegion 0 33.20 0.32 9.43 6.69 21.44 8.34 6.89 15.11 13.69 2.71 0.00 0.00 3.73 3.00 0.82 0.00 1.07 1.20 2.23 0.00 8.63 24.69 16.47 85 E19_Dd KnownBoundary 0 6.08 0.00 5.12 2.06 7.72 13.80 4.24 18.81 7.67 0.00 0.00 0.00 0.00 0.00 5.19 0.00 0.00 2.20 3.76 0.00 2.78 11.08 3.93 86 ER19e ExonRegion 0 30.60 4.97 4.57 6.01 12.56 9.45 9.32 20.80 16.92 4.00 1.23 5.86 8.95 5.80 8.73 5.69 5.03 4.20 5.66 6.33 9.39 15.80 15.69