Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LYPLA2 Gene 0 91.77 23.76 117.26 53.35 51.15 98.55 77.79 109.41 79.46 292.10 218.26 40.36 48.53 276.05 319.82 275.55 203.38 57.20 102.75 42.79 154.31 107.96 109.94 2 374514 Transcript 0 3.56 1.53 2.14 1.58 1.40 5.95 0.25 2.94 0.58 4.29 2.85 0.00 0.00 4.28 5.05 2.33 2.78 1.91 0.03 0.78 4.01 1.89 2.05 3 374506 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 400061 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 420982 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 374505 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 495365 Transcript 0 0.00 0.00 0.00 0.00 3.99 2.90 1.99 4.64 0.00 2.93 2.05 0.00 0.00 0.00 5.32 0.00 0.00 6.76 0.00 0.00 0.00 0.00 0.00 8 374503 Transcript 0 10.30 0.00 0.00 0.00 3.90 0.00 0.00 2.55 2.92 3.06 0.00 0.00 0.00 4.94 0.00 0.00 9.54 3.65 0.00 0.00 0.00 0.00 0.00 9 374502 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 492577 Transcript 0 0.00 1.55 1.33 0.00 0.00 0.00 0.00 0.84 0.00 5.76 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.99 1.44 0.00 1.66 0.00 11 421070 Transcript 0 5.48 0.06 5.80 2.02 1.51 0.95 3.02 3.33 3.34 6.54 3.26 0.08 0.97 2.43 4.79 2.57 4.44 1.40 3.04 0.07 2.02 3.10 6.73 12 374501 Transcript 0 5.15 0.04 3.72 1.49 1.46 8.23 1.05 2.97 3.52 11.79 4.74 1.14 6.73 10.76 8.10 12.00 9.28 2.23 3.67 1.57 2.99 5.11 6.21 13 472213 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 IG40_SR3 SilentIntergenicRegion 0 8.17 1.19 3.39 3.17 6.93 3.05 6.60 5.91 5.93 4.76 1.79 3.20 1.70 3.74 2.18 3.05 2.26 2.06 0.62 1.14 4.41 7.74 9.47 15 IG40_AR4 ActiveIntergenicRegion 0 2.28 1.20 2.69 1.99 3.15 3.06 3.12 1.52 2.35 1.84 1.90 1.00 0.00 1.93 1.00 0.58 1.62 0.45 0.62 0.42 3.24 7.97 6.91 16 ER1a ExonRegion 0 0.77 0.00 0.60 1.11 1.46 1.81 0.50 0.70 0.54 1.12 0.87 0.00 0.00 1.24 1.40 0.21 2.26 0.13 0.07 0.49 3.61 1.70 4.10 17 E1_Ab KnownBoundary 0 6.89 0.00 0.00 0.00 0.00 5.17 3.71 0.00 0.00 0.00 5.21 0.00 0.00 2.47 4.45 3.67 11.87 1.78 0.00 6.01 0.00 0.00 0.00 18 E1_Ac KnownBoundary 0 29.04 0.00 4.85 1.66 8.49 2.90 10.82 4.03 1.79 10.91 28.59 13.95 13.31 19.78 56.86 41.36 37.21 2.49 13.93 2.94 15.38 0.00 20.49 19 ER1b ExonRegion 0 72.64 8.46 15.18 7.87 15.88 42.00 37.50 13.27 10.08 50.50 98.02 8.10 29.35 45.06 100.23 181.20 88.80 25.51 40.59 11.67 40.31 9.61 70.38 20 E1_Ad KnownBoundary 1 713.98 85.31 118.42 77.21 266.04 592.67 458.81 114.47 64.00 290.73 679.65 31.36 195.60 442.41 748.01 1820.89 760.73 133.94 556.25 97.47 314.08 124.43 580.21 21 ER1c ExonRegion 1 379.39 48.68 92.44 46.17 165.90 343.72 266.28 81.45 48.40 231.67 485.76 29.49 148.62 365.83 603.64 1228.05 521.34 91.58 407.13 69.28 239.10 102.09 419.02 22 ER1d ExonRegion 1 527.84 59.31 109.19 54.82 236.36 525.79 369.46 91.42 60.59 288.13 621.64 35.60 174.57 583.60 757.23 1681.40 656.33 101.22 751.21 83.81 366.18 269.01 591.08 23 E1a_E3b KnownJunction 0 86.68 17.50 128.38 60.37 53.14 167.80 114.20 130.12 80.12 367.85 126.87 18.01 6.66 44.44 76.64 264.29 115.01 76.44 278.22 11.63 172.17 253.94 168.93 24 ER1e ExonRegion 1 334.77 36.74 111.93 55.50 175.49 409.32 257.31 95.84 63.89 303.97 384.31 22.84 62.75 344.71 327.84 1103.99 417.73 93.09 662.99 54.07 289.98 306.56 434.22 25 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 0.19 0.00 26 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E2a_E3b KnownJunction 0 0.00 3.09 2.66 0.00 0.00 0.00 0.00 1.68 0.00 11.52 2.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.24 2.88 0.00 3.12 0.00 28 ER2b ExonRegion 0 0.00 0.00 0.00 0.27 0.64 0.00 0.00 0.00 0.00 0.32 0.70 0.00 0.00 0.58 0.00 0.00 0.00 0.00 3.19 0.00 0.35 2.08 0.00 29 ER3a ExonRegion 0 10.96 0.12 11.61 4.04 3.03 1.90 6.05 6.65 6.69 13.07 6.53 0.16 1.95 4.86 9.58 5.13 8.88 2.81 6.07 0.14 4.03 6.19 13.46 30 E3_Ab KnownBoundary 0 10.59 0.00 7.66 4.96 0.00 2.33 6.49 7.11 5.84 14.24 9.21 0.00 0.00 7.24 10.51 10.34 15.90 0.00 3.48 0.00 3.15 0.00 4.10 31 ER3b ExonRegion 1 24.12 7.19 68.30 26.49 16.37 43.30 24.51 53.70 48.73 210.56 218.68 28.92 9.70 96.26 118.75 98.63 246.54 17.67 48.99 37.82 157.28 48.02 42.91 32 E3a_E4a KnownJunction 1 10.59 6.58 96.36 45.55 31.15 28.34 15.32 78.45 77.29 270.88 493.34 24.61 33.93 251.40 276.90 93.65 599.16 14.47 26.35 57.59 315.37 24.49 16.90 33 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.00 12.58 0.00 0.00 0.00 0.00 8.54 8.32 0.00 0.00 0.00 0.00 0.00 0.00 34 ER4a ExonRegion 1 16.80 12.01 175.88 76.66 41.39 29.11 26.81 145.51 112.09 466.75 378.49 19.89 49.54 350.66 383.60 448.51 430.66 89.38 172.21 84.91 291.99 111.79 150.50 35 E4a_E5a KnownJunction 1 26.52 14.21 207.03 98.39 60.78 38.90 51.58 165.86 105.38 517.52 296.02 29.86 53.24 499.44 567.03 913.18 235.25 143.64 341.75 99.46 250.07 229.01 314.05 36 E5_Aa NovelBoundary 0 10.74 3.35 11.56 2.06 20.20 15.79 17.40 13.64 8.88 48.14 12.06 0.00 0.00 16.89 5.81 16.83 8.23 5.72 23.25 5.05 23.04 6.06 7.77 37 ER5a ExonRegion 1 43.42 13.06 190.84 89.43 44.88 45.54 51.96 181.33 136.31 499.06 286.27 80.75 201.17 502.30 651.60 1327.10 212.21 160.08 625.49 85.33 203.71 316.32 514.27 38 E5a_E6b KnownJunction 0 47.05 2.43 144.44 73.65 54.58 68.31 67.70 148.61 114.78 353.29 217.00 73.37 125.48 302.31 368.38 546.78 222.16 110.85 180.52 73.70 159.82 154.31 273.50 39 ER6a ExonRegion 0 5.15 0.04 3.72 1.49 1.46 8.23 1.05 2.97 3.52 11.79 4.74 1.14 6.73 10.76 8.10 12.00 9.28 2.23 3.67 1.57 2.99 5.11 6.21 40 E6_Ab KnownBoundary 0 10.08 0.00 7.57 1.63 0.00 7.50 0.00 2.18 3.18 12.57 0.00 0.00 0.00 9.83 0.00 3.33 4.11 0.00 3.76 0.00 0.00 0.00 3.50 41 ER6b ExonRegion 0 40.75 7.40 138.73 70.84 102.02 111.74 60.42 139.86 117.39 342.14 215.70 42.65 61.27 357.72 458.95 398.39 183.02 96.44 118.47 79.81 150.46 157.06 200.94 42 E6a_E7a KnownJunction 0 31.19 5.72 153.75 74.62 104.67 234.92 92.12 106.75 109.37 320.28 237.53 44.41 53.08 290.42 383.83 251.81 165.97 65.37 83.96 71.97 145.36 95.83 117.72 43 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 3.99 2.90 1.99 4.64 0.00 2.93 2.05 0.00 0.00 0.00 5.32 0.00 0.00 6.76 0.00 0.00 0.00 0.00 0.00 44 ER7a ExonRegion 1 33.07 14.02 149.29 64.65 66.84 298.79 196.97 109.50 108.20 353.46 312.45 52.04 27.46 301.41 311.88 200.25 197.78 63.48 63.64 77.44 197.78 100.27 77.82 45 E7_Da NovelBoundary 1 24.45 2.96 54.70 17.65 25.21 185.12 133.46 28.01 27.23 108.39 138.30 12.45 5.68 58.39 71.95 103.31 89.29 22.09 52.43 25.12 68.02 41.15 27.49 46 E7b_E8a KnownJunction 1 118.17 67.49 184.56 74.75 49.58 411.30 338.20 157.19 126.76 490.79 431.74 36.01 25.97 278.53 298.66 186.87 411.22 66.53 70.59 84.31 214.00 131.77 99.87 47 E7b_E9a KnownJunction 0 0.00 0.00 0.00 1.43 0.00 0.00 0.00 0.00 2.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 0.00 0.00 0.00 0.00 0.00 0.00 48 ER7b ExonRegion 1 63.86 42.62 155.14 60.86 45.14 369.87 292.65 130.46 113.15 426.90 383.55 29.18 14.68 266.07 287.60 190.86 319.90 66.04 68.42 74.65 232.25 128.54 75.71 49 E8_Aa NovelBoundary 0 10.74 0.00 4.29 6.59 23.68 5.62 1.81 11.62 8.54 15.74 10.48 13.05 0.00 10.60 32.02 8.37 12.06 2.11 0.00 8.95 2.41 0.00 3.84 50 E8_Ab NovelBoundary 0 162.25 52.89 127.35 54.90 131.49 209.71 159.34 163.84 94.27 397.91 331.72 81.18 30.36 424.16 474.94 336.58 281.63 60.65 75.20 71.01 261.13 134.53 116.86 51 ER8a ExonRegion 1 103.14 51.31 144.59 61.74 67.43 261.13 200.05 163.63 115.36 440.53 366.09 53.97 31.42 359.09 340.80 273.14 342.19 67.07 63.07 67.38 230.58 134.80 92.01 52 ER8b ExonRegion 0 214.39 28.84 163.17 81.31 98.09 140.99 93.25 170.88 126.09 465.15 337.69 56.97 73.76 467.41 464.07 375.91 288.75 83.11 100.99 76.55 229.49 166.35 137.49 53 E8a_E9a KnownJunction 1 647.97 41.18 227.79 134.78 142.02 142.13 104.00 202.95 141.95 524.99 405.21 43.51 194.31 552.12 540.33 539.26 365.22 118.97 187.96 105.66 234.14 277.69 196.25 54 ER9a ExonRegion 0 242.76 31.16 176.17 80.30 66.79 112.24 90.61 157.20 116.29 435.39 353.02 62.27 96.33 464.91 527.89 352.84 342.16 95.41 114.02 70.46 243.01 163.66 144.13 55 E9_Da KnownBoundary 0 73.12 6.25 29.98 7.92 39.64 32.54 33.21 41.16 23.84 74.94 35.17 18.46 6.49 47.91 101.98 34.61 31.51 24.17 12.42 12.14 22.73 19.47 15.62 56 E9a_E9b KnownJunction 0 78.75 24.27 137.81 75.25 23.77 144.69 93.71 124.54 91.72 387.91 264.49 37.36 32.14 258.82 265.53 203.79 253.58 60.90 78.03 47.36 232.90 136.80 79.56 57 E9a_E9c KnownJunction 0 10.30 0.00 0.00 0.00 3.90 0.00 0.00 2.55 2.92 3.06 0.00 0.00 0.00 4.94 0.00 0.00 9.54 3.65 0.00 0.00 0.00 0.00 0.00 58 ER9b ExonRegion 0 21.17 7.36 23.01 6.19 14.09 15.12 21.64 27.88 17.53 52.18 21.45 3.91 1.01 33.01 37.29 28.00 17.83 14.37 17.30 4.90 14.80 8.46 9.10 59 E9_Ab KnownBoundary 0 22.15 5.99 31.61 5.83 36.76 34.18 24.16 40.83 16.55 45.61 17.27 0.00 0.00 40.50 29.79 27.43 9.16 25.33 26.54 5.69 13.04 8.88 0.00 60 ER9c ExonRegion 0 105.22 25.40 193.08 73.45 36.44 102.04 83.20 167.45 106.76 465.62 275.18 41.23 33.56 389.90 419.23 287.94 322.86 64.47 75.20 54.94 233.70 158.92 101.10 61 E9_Db KnownBoundary 0 161.14 27.63 197.39 67.42 70.88 95.68 97.69 173.29 116.20 445.45 328.93 61.52 41.23 467.07 520.43 460.39 395.89 91.90 100.71 98.69 242.11 170.05 145.97 62 ER9d ExonRegion 0 142.58 25.74 220.27 66.85 73.68 136.51 111.79 185.03 140.65 503.35 342.41 62.72 68.52 543.09 555.55 466.62 361.17 121.19 140.86 89.57 262.89 168.87 163.88 63 E9_Ac KnownBoundary 0 208.33 30.98 203.51 80.88 127.50 240.20 173.16 168.12 143.08 450.50 403.10 115.69 99.34 553.54 628.47 512.17 346.14 105.71 167.35 81.24 295.17 162.70 199.32 64 ER9e ExonRegion 0 149.30 26.31 226.57 107.90 87.18 168.90 131.82 212.38 145.05 563.78 451.73 65.21 69.96 479.99 577.83 359.57 392.67 115.06 133.45 59.97 324.73 114.85 148.30 65 E9_Dc KnownBoundary 0 31.71 6.51 50.23 19.68 15.96 15.56 31.66 65.06 23.32 95.01 42.64 18.31 0.00 36.38 49.45 38.96 40.77 12.93 22.97 0.00 23.10 3.12 11.10 66 E9c_E9d KnownJunction 0 156.55 26.77 224.00 114.37 77.50 166.38 122.02 181.51 120.25 546.75 392.10 41.26 64.12 374.24 503.49 242.67 402.06 89.66 98.73 45.06 312.04 93.69 136.75 67 ER9f ExonRegion 0 26.22 8.73 45.25 17.34 18.96 15.54 36.63 68.89 22.50 95.57 46.39 12.99 11.84 45.51 58.41 40.92 39.13 22.65 27.58 5.14 30.50 8.94 11.60 68 E9_Ad KnownBoundary 0 32.15 18.09 23.00 5.29 27.76 27.54 38.07 34.26 19.18 52.06 31.96 25.06 19.80 41.67 28.93 23.67 44.97 17.49 0.00 9.40 21.25 5.51 0.00 69 E9_Dd KnownBoundary 0 179.88 67.09 197.80 81.51 134.55 208.23 218.61 189.06 133.19 511.16 381.68 68.27 60.71 445.70 631.07 361.96 430.76 74.20 114.45 47.30 260.89 222.22 118.74 70 ER9g ExonRegion 0 136.73 43.04 215.95 100.76 101.50 177.76 159.27 216.86 149.53 594.25 391.80 54.12 66.29 415.94 534.99 297.71 446.17 110.43 108.41 56.95 304.85 167.10 123.93 71 ER9h ExonRegion 0 126.61 48.50 199.10 79.09 102.16 194.05 163.53 201.39 152.59 557.40 398.35 68.62 44.63 452.19 523.37 365.93 421.21 99.50 105.21 54.16 247.28 181.14 138.11 72 E9_De KnownBoundary 0 103.87 34.93 133.58 65.33 78.35 182.28 107.93 147.00 120.28 414.13 353.35 43.96 33.60 386.31 423.64 304.88 341.37 75.32 79.81 68.01 195.22 124.67 144.43 73 ER9i ExonRegion 0 161.38 47.33 193.67 91.00 80.29 176.29 133.00 189.33 137.09 495.89 366.85 91.02 62.88 520.16 582.04 460.63 346.25 117.68 118.24 72.05 250.08 140.63 172.32 74 E9_Df KnownBoundary 0 32.23 30.78 123.38 65.19 43.12 60.93 46.50 112.50 88.48 291.43 154.78 25.06 32.14 225.15 216.58 224.04 146.80 71.63 69.27 44.74 82.23 78.93 58.99 75 E9_Dg KnownBoundary 1 45.19 29.93 120.63 64.26 28.95 53.38 25.08 96.65 50.17 221.93 151.41 0.00 20.94 141.62 151.93 190.55 156.43 47.30 68.33 23.65 104.47 82.11 61.12 76 ER9j ExonRegion 0 62.23 50.43 213.46 93.77 70.64 96.09 74.41 178.03 123.02 497.07 323.95 66.67 71.29 498.93 554.72 385.19 312.92 105.32 99.38 76.17 192.60 161.26 129.21 77 ER9k ExonRegion 0 92.78 49.06 188.25 76.22 65.12 109.00 114.79 167.16 121.38 483.21 335.79 56.88 87.70 469.65 454.70 343.91 292.46 98.67 128.93 59.12 231.42 153.56 163.61 78 E9_Dh KnownBoundary 0 160.84 61.37 191.74 87.14 95.25 209.77 150.20 147.99 119.79 441.42 311.71 31.21 88.79 448.41 526.86 391.95 315.47 84.81 191.44 50.88 244.27 179.05 173.63 79 ER9l ExonRegion 0 150.76 54.63 178.17 73.03 83.25 169.45 119.78 152.83 109.81 408.43 261.31 70.44 85.28 394.69 456.99 325.68 265.38 69.48 79.63 48.04 227.12 154.79 127.56 80 E9_Di KnownBoundary 0 127.21 42.62 208.24 82.01 76.99 133.50 94.29 169.59 121.53 460.90 189.10 77.13 66.39 393.96 381.24 277.96 171.95 69.68 60.05 70.37 149.62 139.67 130.01 81 ER9m ExonRegion 0 116.02 34.42 176.12 86.20 75.21 117.19 102.65 164.71 120.37 422.48 282.31 67.26 75.11 409.39 456.31 292.54 238.10 66.28 112.09 52.85 210.67 162.93 124.82 82 E9_Dj KnownBoundary 0 102.39 65.91 176.13 80.98 87.69 96.19 69.73 176.50 127.40 401.67 257.91 48.32 75.00 268.88 444.03 227.80 201.68 51.53 102.40 57.40 192.44 181.37 95.52 83 ER9n ExonRegion 0 77.60 24.87 93.28 55.77 40.26 49.70 40.95 95.05 69.01 214.75 166.76 34.95 35.09 227.10 319.18 144.58 122.27 30.54 66.60 35.04 103.27 103.90 64.93 84 ER9o ExonRegion 0 6.35 3.05 3.68 2.04 1.34 10.09 0.00 5.19 0.62 7.45 4.83 0.00 0.00 7.31 8.70 4.46 3.30 3.70 0.00 1.06 4.41 2.08 0.00