Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 E2F2 Gene 0 4.21 5.51 2.54 3.42 8.73 5.83 33.83 15.82 4.40 31.50 36.24 13.13 9.69 42.33 36.76 43.83 29.21 31.89 8.33 19.65 0.25 0.70 1.54 2 361729 Transcript 0 7.60 9.03 7.37 7.86 14.87 11.63 59.29 36.80 9.94 68.86 76.23 32.88 28.15 86.97 94.50 97.73 69.04 66.51 21.21 48.10 0.36 1.92 2.89 3 487237 Transcript 1 6.80 4.36 0.77 1.75 13.21 1.85 37.95 8.20 3.86 15.55 6.49 28.20 18.53 7.26 17.36 18.83 6.82 5.91 1.97 5.78 0.01 0.02 0.03 4 ER1a ExonRegion 0 3.12 2.90 1.40 1.88 3.55 3.31 23.87 10.31 2.20 27.52 35.59 8.61 7.98 52.23 43.67 35.67 37.11 33.55 8.19 17.27 0.50 0.31 0.44 5 E1a_E2a KnownJunction 0 3.63 3.35 1.27 3.33 7.98 4.83 18.90 24.52 0.00 49.35 22.27 6.30 6.33 51.03 45.86 35.20 32.26 25.99 24.47 12.08 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 0.00 0.00 0.00 1.30 7.89 0.00 16.56 1.97 0.00 5.99 0.00 0.00 6.33 2.35 0.00 7.01 4.02 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 4.65 7.42 6.29 5.05 14.24 10.86 55.37 29.30 5.92 49.36 53.25 19.16 8.50 89.45 75.13 84.45 45.84 58.74 15.72 33.84 0.00 1.45 2.52 8 E2a_E3a KnownJunction 0 9.85 5.79 1.83 2.03 8.15 5.00 52.64 22.55 12.36 41.10 39.12 20.26 20.45 96.12 79.86 64.94 37.31 40.42 26.07 35.03 0.00 3.12 3.59 9 ER3a ExonRegion 0 11.46 8.30 6.51 4.52 17.65 11.55 68.09 33.96 8.28 78.25 83.16 25.15 20.55 100.81 89.24 86.88 68.87 55.67 20.14 51.25 1.02 2.49 2.87 10 E3a_E4a KnownJunction 0 14.00 20.92 8.96 12.39 30.31 15.28 98.22 55.33 11.69 97.99 121.24 47.72 34.09 94.89 141.79 150.39 96.59 103.67 32.19 74.72 0.00 3.12 0.00 11 E4_Aa NovelBoundary 0 3.78 0.00 0.00 1.73 0.00 0.00 20.71 2.30 1.79 4.24 0.00 0.00 0.00 5.47 4.45 20.08 9.54 9.78 0.00 3.00 0.00 0.00 0.00 12 ER4a ExonRegion 0 9.45 14.98 14.84 11.48 30.83 19.09 96.36 54.19 16.25 100.98 135.19 53.67 32.51 134.03 131.85 158.31 109.66 111.23 24.68 71.11 0.10 0.79 9.53 13 E4_Da NovelBoundary 0 0.00 8.75 1.15 0.00 0.00 0.00 19.70 4.56 0.00 2.77 12.63 5.85 0.00 9.12 29.67 7.09 19.64 8.71 0.00 6.07 0.00 0.00 0.00 14 E4a_E5b KnownJunction 0 12.67 18.35 23.80 20.34 23.01 18.11 104.58 60.09 25.98 116.90 122.45 67.37 53.89 131.26 164.04 166.37 165.97 151.01 21.27 82.01 2.35 2.63 11.78 15 I4 Intron 0 6.67 0.84 0.25 0.28 4.04 0.75 15.61 3.53 0.50 2.58 5.30 6.70 5.30 9.38 17.10 35.04 9.50 3.53 3.49 5.25 0.00 0.57 1.21 16 I4_SR1 SilentIntronRegion 0 6.69 0.84 0.25 0.28 4.05 0.76 15.65 3.54 0.51 2.58 5.31 6.72 5.31 9.40 17.14 35.14 9.53 3.54 3.50 5.26 0.00 0.57 1.21 17 E5_Aa NovelBoundary 0 0.00 0.00 0.00 1.86 6.96 0.00 32.02 13.55 3.10 12.49 6.74 12.60 46.75 4.94 11.00 3.33 0.00 0.00 4.80 5.62 0.00 0.00 0.00 18 ER5a ExonRegion 1 6.80 4.36 0.77 1.75 13.21 1.85 37.95 8.20 3.86 15.55 6.49 28.20 18.53 7.26 17.36 18.83 6.82 5.91 1.97 5.78 0.01 0.02 0.03 19 E5_Ab KnownBoundary 1 15.85 6.45 0.00 3.73 9.93 0.00 50.65 6.41 1.50 15.98 14.53 61.97 6.01 7.18 9.77 12.39 3.74 6.05 0.00 18.66 0.00 0.00 0.00 20 ER5b ExonRegion 0 11.59 14.06 17.77 20.43 20.75 17.55 112.51 69.99 29.27 135.10 170.11 88.15 62.78 152.13 181.43 248.67 133.19 196.75 35.91 94.31 4.08 2.91 4.71 21 E5a_E6a KnownJunction 0 27.41 8.75 24.66 29.77 20.29 28.34 158.10 57.09 19.47 135.33 189.15 74.12 25.65 141.80 153.90 241.05 166.15 173.65 35.30 136.14 2.90 0.00 6.32 22 ER6a ExonRegion 0 21.57 10.83 10.32 13.93 18.54 21.27 110.18 62.05 21.87 123.00 131.45 61.82 62.36 118.20 149.42 166.02 113.70 100.72 34.27 90.29 1.79 1.82 7.30 23 E6_Da NovelBoundary 0 23.41 22.69 10.17 21.01 23.60 9.09 86.43 65.96 14.58 104.55 89.18 34.96 38.47 85.76 99.39 108.60 78.45 34.70 15.44 98.62 0.00 5.33 0.00 24 E6b_E7a KnownJunction 0 3.56 3.09 9.61 8.59 11.97 21.35 53.48 54.71 12.85 90.07 106.24 55.82 68.18 82.64 114.84 146.20 79.20 94.14 33.32 66.09 0.00 2.82 0.00 25 ER6b ExonRegion 0 8.73 9.32 5.41 14.54 9.03 14.14 56.71 49.55 11.37 86.54 97.85 52.13 53.74 97.04 134.79 120.37 70.83 37.49 22.16 75.00 0.00 3.82 0.00 26 I6 Intron 0 5.65 5.43 1.37 1.24 9.77 2.58 36.15 6.27 1.03 8.88 6.43 4.97 3.70 7.26 12.89 12.67 9.28 7.06 2.39 8.77 0.00 0.59 0.55 27 I6_SR1 SilentIntronRegion 0 5.66 5.43 1.37 1.24 9.78 2.58 36.18 6.28 1.04 8.89 6.43 4.98 3.70 7.27 12.91 12.68 9.28 7.06 2.39 8.78 0.00 0.59 0.55 28 I6 Intron 0 13.02 3.83 2.43 1.80 14.54 3.15 35.96 9.71 2.55 7.86 8.79 10.97 4.37 5.87 14.69 16.31 10.61 9.48 0.71 9.08 0.00 0.12 0.81 29 I6_AR1 ActiveIntronRegion 0 18.61 5.66 3.21 2.68 28.23 2.15 50.06 10.57 2.43 11.02 11.90 18.81 3.96 5.24 17.91 20.04 14.03 11.86 0.93 12.78 0.00 0.00 1.29 30 I6_SR1 SilentIntronRegion 0 9.64 2.72 1.96 1.27 6.21 3.77 27.44 9.20 2.63 5.95 6.91 6.21 4.63 6.27 12.76 14.07 8.55 8.04 0.57 6.84 0.00 0.19 0.52 31 E7_Aa NovelBoundary 0 40.97 3.35 5.06 4.93 26.23 4.20 85.28 19.22 4.72 9.37 17.32 12.60 6.82 4.94 14.71 44.43 9.44 22.55 0.00 19.24 0.00 0.00 0.00 32 ER7a ExonRegion 0 2.52 4.92 1.17 2.29 6.90 4.41 24.01 10.29 2.46 19.44 22.17 5.49 3.48 27.16 18.44 26.19 15.83 19.67 5.10 10.75 0.00 0.55 1.05