Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-385F5.2 Gene 0 14.42 12.60 8.29 24.95 19.61 17.04 14.22 21.01 16.91 22.06 40.31 22.30 45.02 22.75 10.66 15.04 16.36 9.87 12.17 23.72 10.47 18.93 29.41 2 433131 Transcript 0 11.73 5.88 3.87 12.51 9.15 8.97 6.73 9.80 7.89 10.92 20.73 10.40 21.01 10.75 8.45 8.97 10.91 4.60 5.68 11.07 4.88 9.72 13.72 3 ER1a ExonRegion 0 4.65 0.00 0.02 1.97 0.00 0.30 0.48 0.02 0.00 0.37 0.78 0.00 0.07 0.68 2.55 2.51 3.61 0.00 0.00 0.00 0.00 0.66 0.02 4 E1_Da NovelBoundary 0 17.78 0.00 3.19 2.00 20.29 5.22 1.68 5.05 7.70 0.00 12.11 0.00 12.50 0.00 0.00 8.20 4.58 2.36 0.00 3.13 6.18 2.57 4.18 5 E1a_E2a KnownJunction 0 12.22 0.00 0.00 1.43 0.00 2.90 0.00 0.00 0.00 1.67 5.32 0.00 0.00 0.00 8.90 4.36 7.67 0.00 0.00 0.00 0.00 2.27 0.00 6 Ix Intron 0 8.45 17.55 10.07 16.64 16.59 27.45 20.25 13.31 14.90 24.41 18.74 17.80 19.78 17.30 5.81 12.76 18.00 14.76 17.99 43.89 6.61 10.53 7.98 7 Ix_SR4 SilentIntronRegion 0 6.06 11.16 5.57 8.89 11.14 8.31 10.66 10.79 13.59 21.48 30.22 18.36 14.36 16.31 5.48 16.63 9.74 17.24 14.07 53.28 10.69 10.16 11.04 8 Ix_AR4 ActiveIntronRegion 0 5.32 14.88 6.98 10.33 10.46 19.39 11.91 9.18 12.07 19.13 17.90 14.11 13.40 17.18 5.29 12.75 16.11 14.46 10.18 41.34 6.91 5.97 9.08 9 Ix_SR3 SilentIntronRegion 0 3.10 4.75 1.80 4.82 14.18 15.34 9.89 3.92 5.81 12.23 16.43 0.58 11.26 4.98 1.26 4.66 8.69 17.55 4.25 15.46 1.84 3.19 2.94 10 Ix_AR3 ActiveIntronRegion 0 8.50 16.63 10.26 18.56 15.85 30.70 21.85 14.33 18.10 23.84 20.05 22.98 21.87 17.52 3.90 16.58 25.08 15.94 17.04 42.90 5.11 11.01 4.66 11 Ix_SR2 SilentIntronRegion 0 10.87 22.28 12.15 23.84 22.20 34.50 26.02 17.97 16.16 28.67 16.73 20.64 27.06 18.88 7.46 12.12 17.25 16.19 26.76 46.68 7.67 13.05 9.27 12 Ix_AR2 ActiveIntronRegion 0 16.19 19.62 19.39 20.24 7.02 40.16 23.37 14.95 20.13 45.04 17.78 17.43 17.47 25.46 17.04 7.13 33.34 14.00 31.69 48.40 5.23 17.71 10.06 13 Ix_SR1 SilentIntronRegion 0 13.97 16.33 18.34 20.46 25.77 52.42 35.38 19.94 19.91 39.98 28.22 15.39 12.12 14.29 7.10 5.26 24.12 11.37 26.17 60.10 4.34 21.93 8.81 14 Ix_AR1 ActiveIntronRegion 0 11.42 19.71 15.04 14.26 26.12 30.03 32.00 9.82 12.84 27.13 16.54 10.54 20.01 13.12 5.19 6.13 11.99 6.10 17.87 39.20 4.17 14.91 5.64 15 Ix Intron 0 13.48 22.90 16.52 26.27 15.96 37.97 20.32 18.30 14.31 19.36 11.01 15.57 13.26 12.68 4.00 9.96 19.25 11.02 16.22 32.51 9.60 9.35 5.71 16 Ix_SR2 SilentIntronRegion 0 17.03 28.77 17.17 30.31 19.54 40.27 27.14 20.33 14.91 19.69 12.19 21.49 17.45 13.06 4.58 10.86 16.53 8.95 12.89 35.85 9.28 11.10 4.45 17 Ix_AR3 ActiveIntronRegion 0 8.47 15.25 9.80 8.40 2.68 13.14 10.81 3.46 4.73 8.41 7.73 11.55 8.60 1.62 2.90 5.94 0.00 6.47 3.19 10.64 7.71 2.08 0.00 18 Ix_AR1 ActiveIntronRegion 0 9.09 15.71 16.62 22.32 11.95 37.45 11.59 16.82 14.54 20.25 9.96 7.87 8.01 13.19 3.37 9.18 24.94 14.82 22.43 29.96 10.60 7.51 8.07 19 Ix Intron 0 30.90 50.72 47.02 66.51 34.45 82.37 31.95 39.17 46.84 55.29 48.21 37.57 47.69 33.41 17.17 19.29 32.80 13.23 18.09 56.95 9.16 28.95 15.78 20 Ix_AR1 ActiveIntronRegion 0 31.03 50.92 47.21 66.78 34.59 82.69 32.08 39.33 47.03 55.50 48.40 37.72 47.88 33.54 17.23 19.36 32.93 13.28 18.16 57.18 9.20 29.07 15.84 21 Ix Intron 0 35.88 98.89 22.87 55.38 35.50 37.84 24.20 34.17 33.36 33.26 41.32 24.88 35.31 27.31 14.36 26.71 22.87 7.46 10.80 42.03 9.74 26.10 30.73 22 Ix_AR1 ActiveIntronRegion 0 45.14 124.43 28.78 69.68 44.67 47.61 30.45 42.99 41.97 41.85 51.98 31.30 44.41 33.87 17.69 33.59 28.77 9.39 13.59 52.88 12.26 32.82 38.67 23 E2_Aa NovelBoundary 1 40.75 35.78 35.78 60.73 43.04 46.79 44.30 40.50 38.08 34.60 60.28 26.56 103.08 54.21 0.00 36.32 14.31 12.48 44.42 39.05 6.30 35.82 62.49 24 ER2a ExonRegion 0 18.32 17.63 11.60 34.13 27.45 23.73 19.70 29.39 23.67 30.72 56.10 31.20 62.98 31.56 13.90 20.04 21.45 13.81 17.03 33.20 14.65 26.22 41.15