Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RP11-439E19.3	Gene	0	5.91	6.09	27.13	24.85	11.06	4.11	9.22	11.21	41.06	12.91	1.58	0.45	1.05	0.57	0.50	0.72	0.89	9.82	7.91	14.19	4.15	1.73	3.68
2	421003	Transcript	0	2.38	2.62	14.60	10.10	5.51	2.69	6.03	7.31	33.49	7.85	1.12	0.11	0.70	0.21	0.13	0.66	1.09	6.20	4.14	9.14	3.45	1.93	1.29
3	426089	Transcript	0	5.03	5.90	26.82	16.41	7.75	2.56	5.27	6.93	20.66	9.33	0.62	0.32	0.00	0.26	0.38	0.00	0.48	6.95	6.22	9.42	1.99	1.53	2.38
4	438701	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	419361	Transcript	0	0.00	15.79	24.36	33.36	3.57	0.00	2.25	15.69	85.39	12.36	0.00	0.00	6.82	0.00	5.07	0.00	0.00	0.00	4.80	21.03	2.41	6.00	4.01
6	IG46	Intergenic	0	4.93	5.59	15.46	15.47	11.32	1.94	8.41	5.45	39.34	4.70	0.41	0.00	0.00	1.54	0.00	0.63	2.10	8.94	3.37	15.31	3.73	1.76	3.73
7	IG46_SR1	SilentIntergenicRegion	0	4.95	5.62	15.52	15.54	11.37	1.95	8.43	5.47	39.49	4.72	0.41	0.00	0.00	1.54	0.00	0.63	2.10	8.98	3.38	15.37	3.75	1.77	3.74
8	ER1a	ExonRegion	0	4.95	5.12	16.98	19.05	11.50	5.28	14.54	13.62	47.09	13.45	2.51	0.76	3.24	1.45	0.19	2.09	1.70	11.31	8.27	16.42	6.17	1.35	5.50
9	E1_Da	NovelBoundary	0	0.00	0.00	1.69	1.76	0.00	2.84	1.99	2.46	2.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.67	2.49	0.00	18.66	3.09	0.00	0.00
10	E1a_E2a	KnownJunction	0	0.00	2.70	38.20	18.18	8.15	2.90	8.61	14.25	69.62	16.87	2.26	0.00	0.00	0.00	0.00	0.00	0.00	15.59	7.81	12.27	11.49	5.94	0.00
11	ER2a	ExonRegion	0	2.56	1.86	20.51	13.45	2.74	4.92	8.22	9.80	50.88	9.48	1.10	0.00	0.09	0.00	0.00	1.52	2.53	8.29	8.47	12.05	3.47	3.28	1.39
12	E2_Da	NovelBoundary	0	0.00	2.50	10.44	18.11	12.82	8.69	19.34	0.00	16.61	2.42	2.47	0.00	0.00	3.00	0.00	0.00	0.00	8.46	7.62	24.42	2.53	0.00	0.00
13	E2a_E3a	KnownJunction	0	3.19	3.35	13.25	7.13	3.23	4.49	0.00	4.64	26.39	4.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	6.26	0.00	0.00	0.00
14	Ix	Intron	0	2.81	7.33	15.23	15.79	11.16	4.17	6.02	2.93	25.12	9.72	4.03	0.68	0.73	0.76	0.39	0.00	1.88	6.97	9.06	19.77	4.18	3.16	11.14
15	Ix_SR1	SilentIntronRegion	0	2.82	7.35	15.29	15.85	11.20	4.19	6.05	2.94	25.22	9.76	4.05	0.68	0.73	0.76	0.39	0.00	1.88	7.00	9.09	19.84	4.19	3.17	11.18
16	E3_Aa	NovelBoundary	0	6.74	2.96	17.62	24.91	4.07	0.00	12.72	8.67	15.60	5.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.09	9.60	21.22	0.00	5.88	12.55
17	ER3a	ExonRegion	0	2.37	5.30	11.44	11.02	12.95	1.27	6.31	8.86	35.83	8.57	1.98	0.00	1.61	0.00	0.70	1.02	3.39	3.97	4.40	14.47	3.02	0.00	2.11
18	E3_Da	NovelBoundary	0	0.00	18.22	10.20	22.57	7.64	2.90	10.42	6.16	25.87	16.33	2.58	0.00	0.00	0.00	0.00	8.72	0.00	15.79	12.80	28.83	0.00	12.49	4.35
19	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	1.86	0.00	0.00	0.00	0.00	1.22	1.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	Ix	Intron	0	8.40	5.41	10.51	10.59	10.23	2.48	9.65	10.22	26.46	10.33	1.45	0.39	1.84	0.87	0.83	0.56	1.71	10.95	8.41	16.79	4.17	2.04	3.05
21	Ix_AR1	ActiveIntronRegion	0	4.38	1.07	3.93	9.61	6.85	2.45	10.41	2.09	17.85	5.27	1.36	0.00	0.00	0.00	0.00	0.00	0.00	6.61	8.89	9.71	2.24	0.00	2.63
22	Ix_SR1	SilentIntronRegion	0	6.13	3.89	4.91	11.95	10.79	1.22	6.94	3.52	18.99	7.23	2.21	0.00	0.89	0.95	0.78	0.57	1.23	4.98	9.41	8.04	1.90	1.95	3.77
23	Ix_AR2	ActiveIntronRegion	0	14.89	9.03	22.44	20.78	11.86	3.90	8.44	17.53	44.06	12.90	4.06	0.89	3.68	0.82	1.18	0.00	1.68	14.78	10.20	18.85	8.17	3.17	5.30
24	Ix_SR2	SilentIntronRegion	0	30.29	8.24	21.72	22.62	19.39	10.86	13.23	21.52	46.82	18.82	3.25	0.61	3.44	1.47	3.20	2.04	5.09	27.90	11.24	34.19	10.03	2.15	7.08
25	Ix_SR3	SilentIntronRegion	0	4.11	4.84	8.12	6.93	8.38	0.98	9.58	8.63	22.08	9.15	0.67	0.36	1.54	0.78	0.38	0.37	1.24	8.52	7.49	15.06	3.04	1.96	1.93
26	Ix	Intron	0	3.54	4.29	17.18	9.29	5.65	3.87	6.52	11.78	17.32	8.86	0.51	1.25	0.34	0.81	0.18	0.00	2.03	10.33	8.12	14.78	4.07	1.28	1.81
27	Ix_SR1	SilentIntronRegion	0	3.55	4.31	17.27	9.33	5.68	3.89	6.55	11.84	17.41	8.91	0.51	1.26	0.34	0.81	0.18	0.00	2.04	10.39	8.16	14.86	4.09	1.29	1.82
28	ER4a	ExonRegion	0	2.90	5.34	23.21	12.39	9.13	2.16	4.59	9.03	22.03	9.30	0.38	0.00	0.00	0.52	0.76	0.00	0.96	5.76	5.27	11.19	2.32	1.62	0.84
29	E4_Ab	KnownBoundary	0	0.00	0.00	40.00	31.06	11.88	0.00	4.20	13.84	42.82	20.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.13	11.58	6.46	0.00	0.00	0.00
30	ER4b	ExonRegion	0	10.61	12.30	40.29	31.77	24.41	6.23	8.43	15.45	70.29	22.77	0.00	0.00	0.00	0.10	0.00	0.00	2.08	11.06	17.03	12.53	7.56	1.16	0.15
31	E4a_E5a	KnownJunction	0	6.82	15.46	35.78	37.06	20.12	18.46	2.12	11.09	74.80	22.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	22.80	18.82	5.37	6.12	5.94	0.00
32	ER5a	ExonRegion	0	7.23	9.24	42.00	39.93	15.18	8.41	6.37	13.19	76.81	24.25	0.00	0.00	0.00	0.86	2.11	0.00	0.00	17.66	13.15	13.80	4.41	4.73	1.93
33	E5_Ab	KnownBoundary	0	6.30	19.14	39.95	41.42	21.31	0.00	15.68	18.81	88.54	15.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	21.18	7.53	5.50	8.96	0.00	3.67
34	ER5b	ExonRegion	0	7.44	11.03	30.30	36.76	18.68	4.31	10.88	17.59	61.46	17.73	1.26	0.40	1.29	0.00	0.96	0.00	0.00	17.26	10.84	16.47	7.54	0.50	4.96
35	E5_Ac	KnownBoundary	0	18.15	18.42	46.69	48.94	38.88	7.50	19.17	17.46	74.02	16.04	4.69	6.00	6.82	0.00	0.00	0.00	0.00	14.59	8.28	29.59	2.84	3.12	8.45
36	ER5c	ExonRegion	0	10.87	8.89	47.71	59.29	19.45	7.61	12.09	20.95	88.89	21.86	4.92	1.38	0.87	0.83	1.74	0.00	0.00	11.19	5.93	21.35	5.64	3.49	7.55
37	E5_Da	KnownBoundary	0	3.78	0.00	72.68	49.08	12.14	0.00	3.62	5.75	30.15	12.06	4.37	0.00	0.00	0.00	0.00	0.00	0.00	3.52	0.00	11.19	2.97	0.00	4.27
38	E5a_E5d	KnownJunction	0	0.00	15.79	24.36	33.36	3.57	0.00	2.25	15.69	85.39	12.36	0.00	0.00	6.82	0.00	5.07	0.00	0.00	0.00	4.80	21.03	2.41	6.00	4.01
39	ER5d	ExonRegion	0	6.83	4.60	34.94	23.58	7.80	3.55	7.77	7.11	23.34	10.41	0.44	0.00	0.00	0.00	0.30	0.00	0.00	11.63	6.58	13.32	2.72	1.38	1.89
40	E5_Db	KnownBoundary	0	7.56	16.71	43.43	43.68	12.65	2.44	14.53	9.00	23.93	9.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.96	0.00	21.35	6.05	5.08	3.67
41	E5b_E5d	KnownJunction	0	3.56	0.00	1.83	0.00	0.00	0.00	4.50	0.00	3.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.66	0.00	2.49	0.00	2.94	0.00
42	ER5e	ExonRegion	0	5.55	4.79	27.01	25.49	9.86	2.33	6.53	8.02	21.45	10.26	1.34	0.00	0.00	0.00	0.36	0.00	0.00	9.40	7.05	17.55	2.36	1.39	2.16
43	E5_Dc	KnownBoundary	0	0.00	0.00	40.45	27.34	19.69	8.35	18.55	5.75	19.47	7.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.91	4.05	24.48	5.87	0.00	0.00
44	ER5f	ExonRegion	0	7.16	6.45	30.42	20.44	6.38	2.96	5.96	4.83	19.29	9.35	0.86	0.64	0.01	0.00	0.01	0.00	0.00	8.14	7.17	7.64	1.66	1.43	3.93
45	E5_Ad	KnownBoundary	0	14.15	5.99	67.47	71.95	11.71	4.43	5.92	12.94	34.46	23.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.52	9.60	28.44	3.15	3.12	3.16
46	ER5g	ExonRegion	0	9.37	9.85	42.98	53.57	17.23	4.40	8.78	16.74	68.01	19.58	1.80	0.70	0.17	0.56	1.31	0.46	0.00	10.93	12.63	16.98	5.67	2.97	5.33