Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C1orf199 Gene 0 82.63 106.22 51.78 196.55 104.47 92.80 84.25 59.78 56.53 62.68 35.91 74.87 65.80 49.31 31.53 29.82 26.34 34.68 19.35 130.92 5.52 46.31 13.54 2 475997 Transcript 0 9.49 5.05 5.71 12.51 3.09 1.52 9.75 6.82 4.10 4.50 8.83 3.74 1.53 13.52 2.79 9.44 8.34 25.46 5.40 35.10 1.46 0.01 2.72 3 489705 Transcript 0 7.41 7.59 3.48 19.04 4.47 2.28 4.51 0.73 1.04 0.93 5.30 2.47 1.83 5.03 3.53 6.61 6.29 2.35 0.44 9.19 0.00 0.35 2.35 4 366527 Transcript 0 84.30 121.89 41.92 161.78 122.40 103.51 128.73 59.95 60.16 62.02 51.61 91.01 75.27 73.03 28.62 40.40 48.58 53.44 27.56 177.87 8.01 60.29 20.43 5 ER1a ExonRegion 0 5.41 3.02 4.32 6.85 1.05 0.87 4.10 1.52 1.25 2.63 8.88 3.33 4.88 6.76 1.41 4.10 8.52 8.99 4.18 18.92 2.14 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 14.17 8.11 5.68 19.93 3.34 2.65 7.39 6.43 5.18 6.15 13.85 11.61 1.24 23.30 0.85 10.77 10.91 38.08 8.67 36.47 1.22 0.06 2.61 8 E2a_E4a KnownJunction 0 18.37 9.08 12.83 23.27 7.98 2.56 27.51 19.35 9.95 9.21 12.58 0.00 0.00 24.02 8.90 22.90 13.93 54.76 8.75 85.01 2.47 0.00 8.28 9 ER3a ExonRegion 0 4.30 2.81 2.50 13.01 0.96 2.46 5.05 1.47 2.09 1.87 2.65 4.93 3.66 4.59 2.60 4.84 4.83 2.13 0.87 6.68 0.00 0.71 0.35 10 E3_Da NovelBoundary 1 1290.90 2018.65 729.34 714.69 1724.96 1096.81 1893.48 882.80 428.38 883.14 1880.42 3289.22 1071.68 1974.52 2746.04 1675.46 1269.38 397.83 818.19 1128.33 239.51 1258.59 601.47 11 E3a_E4a KnownJunction 0 10.52 12.37 4.46 25.07 7.98 2.10 3.97 0.00 0.00 0.00 7.95 0.00 0.00 5.47 4.45 8.37 7.76 2.57 0.00 11.70 0.00 0.00 4.35 12 I3 Intron 0 24.95 53.01 19.44 92.72 61.81 72.10 113.48 32.54 58.42 53.06 68.93 148.31 134.19 82.21 24.81 56.36 73.14 56.76 31.60 256.36 15.81 63.01 31.39 13 I3_AR1 ActiveIntronRegion 0 19.35 47.93 19.98 95.08 56.49 64.77 111.60 31.10 56.16 47.69 65.70 148.95 154.82 81.48 27.48 57.90 67.79 51.15 29.94 255.26 15.32 67.01 30.31 14 I3_SR1 SilentIntronRegion 0 32.75 60.18 18.77 89.78 69.35 82.45 116.45 34.64 61.73 60.64 73.60 147.94 106.21 83.49 21.21 54.43 80.76 64.68 34.00 258.74 16.53 57.70 33.00 15 E4_Aa NovelBoundary 0 132.69 164.84 37.76 161.75 194.57 227.48 356.39 99.77 112.04 94.98 64.44 176.61 184.73 100.48 14.83 101.51 130.25 47.34 40.47 502.77 21.75 110.65 70.00 16 ER4a ExonRegion 0 29.72 25.52 22.02 50.98 27.57 38.78 72.03 17.23 18.54 17.42 70.48 84.77 76.81 90.97 41.04 36.44 42.67 63.65 23.17 164.23 6.20 23.98 15.32 17 E4_Da NovelBoundary 0 24.00 100.57 12.71 82.14 43.72 76.66 119.50 52.70 62.82 43.22 74.33 218.77 124.34 50.09 29.05 45.46 40.39 47.38 4.80 218.60 5.56 52.60 15.96 18 E4a_E5b KnownJunction 0 20.67 5.72 19.43 52.17 29.37 21.81 21.37 3.61 19.18 22.56 40.38 5.55 20.13 27.96 15.20 46.06 26.65 50.99 8.47 77.34 0.00 0.00 4.27 19 I4 Intron 0 32.57 64.79 31.92 124.50 88.10 90.54 124.79 54.48 68.55 66.54 72.57 175.01 130.46 95.71 23.74 50.50 60.49 55.94 27.71 241.09 8.81 69.84 24.75 20 I4_SR1 SilentIntronRegion 0 18.95 41.91 11.20 85.58 73.96 70.68 101.02 27.64 44.31 37.52 48.16 164.29 119.33 99.01 10.70 32.40 50.09 49.59 27.28 189.72 10.30 57.58 20.58 21 I4_AR1 ActiveIntronRegion 0 33.63 66.58 33.52 127.57 89.26 92.13 126.72 56.56 70.45 68.79 74.48 176.01 131.44 95.57 24.74 51.92 61.34 56.49 27.77 245.23 8.70 70.85 25.09 22 E5_Aa NovelBoundary 0 75.79 127.35 74.39 196.05 99.07 106.93 179.04 63.50 82.23 86.17 121.66 106.08 132.46 138.38 55.50 68.02 107.25 70.93 58.73 279.77 29.34 103.91 52.24 23 ER5a ExonRegion 0 81.69 132.85 29.22 116.79 138.11 111.73 177.02 57.55 64.12 59.15 74.82 111.39 85.72 105.05 26.92 55.46 77.89 79.13 37.93 240.12 11.54 74.70 29.38 24 E5_Ab KnownBoundary 0 66.38 107.28 41.78 141.41 218.25 136.97 204.56 55.41 67.19 74.38 74.23 150.05 59.57 89.41 18.91 77.50 85.27 67.65 44.90 225.76 5.25 58.91 11.35 25 ER5b ExonRegion 0 65.16 102.93 72.78 271.86 126.44 137.28 135.73 69.19 107.38 96.38 118.97 171.78 118.95 142.30 59.42 89.25 86.63 121.05 43.22 362.58 16.01 78.85 45.55 26 E5_Da NovelBoundary 0 7.11 2.76 18.57 22.87 3.57 2.50 22.92 24.03 13.72 9.43 0.00 0.00 12.99 2.47 6.30 8.20 4.77 6.14 12.99 24.16 0.00 22.17 0.00 27 E5a_E6a KnownJunction 0 83.64 106.30 114.37 391.39 121.65 108.57 115.84 87.78 139.67 104.73 154.99 97.53 125.15 153.98 107.05 112.71 112.30 108.28 54.50 462.12 8.15 87.87 47.38 28 I5 Intron 0 4.74 8.64 5.50 16.79 22.75 23.95 22.51 13.73 8.10 8.85 4.93 8.01 11.02 6.66 2.85 6.43 10.71 7.75 4.68 23.35 1.87 11.26 10.21 29 I5_AR1 ActiveIntronRegion 0 1.56 0.00 0.00 0.00 3.96 5.42 3.91 0.00 0.00 0.00 0.00 13.74 0.00 9.11 0.00 0.00 2.44 1.37 4.71 11.01 1.63 6.16 10.85 30 I5_SR1 SilentIntronRegion 0 3.94 5.36 7.36 17.95 22.82 28.43 25.24 8.78 5.99 6.09 6.29 6.08 8.55 6.15 3.99 11.98 12.28 8.55 5.93 26.72 2.38 10.34 13.20 31 I5_AR3 ActiveIntronRegion 0 0.16 6.18 1.23 7.97 4.12 5.36 6.52 7.71 0.86 2.65 1.64 1.33 0.00 10.74 0.00 0.00 11.68 3.06 4.17 6.46 4.49 9.46 6.44 32 I5_SR2 SilentIntronRegion 0 7.36 16.16 5.04 21.24 30.45 25.38 26.11 25.53 14.34 16.10 4.87 9.84 19.06 6.26 2.42 1.30 10.93 9.09 3.01 24.33 0.94 14.37 6.33 33 E6_Aa NovelBoundary 0 18.00 5.85 14.55 52.01 20.20 16.47 27.73 68.96 29.75 8.89 14.21 17.56 6.82 12.30 13.35 8.12 16.64 20.19 13.27 61.62 0.00 40.11 4.35 34 ER6a ExonRegion 0 102.00 103.08 106.94 372.68 189.66 145.68 149.48 116.74 134.83 121.76 178.01 206.79 127.74 194.72 98.55 99.74 138.74 132.28 58.74 453.05 24.19 94.54 52.83 35 E6_Da KnownBoundary 0 201.74 191.41 110.58 476.66 316.13 257.81 309.98 129.67 152.23 115.37 125.51 252.83 197.88 227.62 116.45 77.76 110.89 112.79 44.14 523.67 32.68 120.51 55.49 36 ER6b ExonRegion 0 196.01 265.51 80.00 388.84 253.35 202.93 256.32 112.37 151.27 117.40 176.58 215.20 174.58 214.57 107.99 149.20 149.43 157.06 78.81 483.90 32.64 109.03 53.79 37 E6_Db KnownBoundary 0 139.36 287.12 62.53 191.78 148.05 100.51 139.73 100.02 121.67 102.99 128.35 156.05 136.84 204.07 122.01 126.63 131.28 91.11 59.77 351.16 35.71 76.54 54.55 38 ER6c ExonRegion 0 86.92 110.93 54.62 206.77 106.68 95.28 80.43 62.35 56.20 64.90 28.41 70.64 64.82 41.00 30.32 25.33 19.28 27.75 17.19 115.62 4.47 45.88 11.48