Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PGBD2 Gene 0 37.25 17.58 8.93 9.79 27.36 16.80 15.79 15.84 11.75 21.65 28.84 17.95 13.43 24.90 23.42 20.34 22.41 15.14 7.21 25.23 11.51 15.63 13.41 2 355360 Transcript 0 10.98 8.29 2.93 3.35 13.34 8.40 7.55 7.23 4.34 8.69 4.32 10.21 6.72 3.60 6.21 4.53 4.69 2.82 4.37 8.85 0.53 5.76 2.12 3 329291 Transcript 0 14.99 10.36 6.46 8.51 17.33 12.14 10.78 7.00 7.65 14.01 31.18 13.06 8.67 21.28 14.50 13.17 24.09 14.30 5.57 25.82 13.83 8.74 10.41 4 462488 Transcript 0 0.00 0.00 0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 5 ER1a ExonRegion 0 1.37 0.72 1.25 0.00 5.24 6.99 3.34 0.54 0.00 1.77 0.60 0.09 0.00 0.71 0.06 4.09 3.99 3.35 6.17 4.30 0.00 0.78 1.96 6 E1_Ab KnownBoundary 0 7.11 5.79 2.87 0.00 12.65 12.89 3.36 1.60 1.10 5.80 0.00 0.00 0.00 4.71 0.00 16.49 9.54 12.19 11.39 9.27 0.00 4.78 4.35 7 ER1b ExonRegion 0 23.54 3.80 4.79 0.94 7.19 20.26 12.44 3.63 1.46 4.69 21.69 3.19 0.43 20.10 16.59 20.92 20.84 8.90 5.34 18.87 9.42 8.33 12.16 8 E1a_E3a KnownJunction 0 6.74 6.71 1.54 4.00 3.57 7.44 4.06 4.39 6.80 9.91 14.42 6.15 0.00 27.84 0.00 10.85 21.88 4.56 0.00 6.46 12.05 2.51 15.88 9 ER2a ExonRegion 0 0.00 0.00 0.98 0.00 0.00 0.00 0.00 0.00 0.00 0.01 1.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 4.93 2.61 2.41 3.32 2.88 6.16 7.45 2.19 5.54 11.49 14.38 3.18 17.59 11.85 2.49 6.22 25.84 6.18 9.21 11.44 13.70 3.55 10.05 12 E3a_E4a KnownJunction 0 0.00 2.76 1.24 4.13 0.00 5.00 3.93 0.00 4.02 6.18 22.32 5.70 0.00 2.12 4.45 3.59 18.89 7.59 4.42 20.90 11.49 2.33 0.00 13 E3a_E4b KnownJunction 0 0.00 5.26 1.83 0.00 4.16 0.00 0.00 0.00 0.00 2.36 5.37 0.00 0.00 0.00 0.00 3.25 9.26 0.00 0.00 8.63 5.50 0.00 0.00 14 I3 Intron 0 3.64 1.65 1.32 1.16 4.19 3.76 2.59 2.41 2.39 4.22 7.69 2.76 3.61 11.05 3.86 9.68 5.77 4.29 3.17 6.48 2.79 3.20 3.45 15 I3_SR1 SilentIntronRegion 0 4.32 2.05 1.06 0.45 2.92 2.73 3.17 1.65 2.02 5.50 11.78 2.94 0.00 15.37 2.31 8.98 8.34 6.33 3.68 10.36 4.23 3.68 6.12 16 I3_AR2 ActiveIntronRegion 0 3.05 1.44 1.86 1.60 4.53 3.95 2.74 2.58 2.46 4.47 6.92 2.90 3.65 10.74 5.14 10.98 5.65 5.07 3.31 5.59 2.81 3.61 3.84 17 I3_SR2 SilentIntronRegion 0 8.66 1.66 0.50 0.00 4.38 4.50 2.17 2.81 2.01 2.80 8.95 3.89 5.27 10.73 4.10 8.07 6.30 1.25 3.47 6.38 1.20 3.41 0.80 18 E4_Aa NovelBoundary 0 18.67 0.00 7.27 5.69 12.99 9.54 3.80 2.34 5.82 3.22 12.21 12.60 0.00 14.13 4.45 4.36 0.00 0.00 0.00 15.47 0.00 7.72 7.09 19 ER4a ExonRegion 0 29.97 17.95 11.67 12.89 34.66 19.28 17.62 14.00 11.27 21.83 40.03 20.43 17.34 40.44 24.55 22.75 29.29 21.01 6.71 30.74 16.17 15.16 20.82 20 E4_Ab KnownBoundary 0 68.46 60.78 18.07 6.83 94.14 35.83 30.47 30.60 22.31 22.86 34.01 5.55 46.75 46.91 24.11 31.02 29.73 15.96 8.47 26.33 22.67 6.25 20.06 21 ER4b ExonRegion 0 68.35 32.19 14.66 7.21 40.60 20.46 22.36 20.87 16.68 25.67 64.48 30.02 26.53 56.76 42.19 37.32 55.49 25.51 19.84 28.37 23.50 17.04 21.69 22 E4_Da KnownBoundary 0 64.68 43.41 13.39 8.32 30.56 21.92 9.01 23.37 9.87 20.36 60.07 38.86 19.48 69.75 64.78 45.29 27.49 39.88 21.65 34.58 28.36 13.72 29.28 23 ER4c ExonRegion 0 65.14 21.96 13.47 14.17 34.86 25.23 21.30 22.30 17.75 32.77 47.81 16.72 12.30 38.29 38.35 38.23 37.43 28.46 12.29 39.77 21.26 24.63 23.15 24 E4_Db KnownBoundary 1 38.15 28.42 18.18 8.99 53.23 17.04 32.02 23.54 11.46 34.84 4.53 25.96 33.44 12.77 5.19 0.00 0.00 0.00 8.38 3.13 0.00 32.09 0.00 25 ER4d ExonRegion 1 20.60 15.87 4.60 6.71 21.44 9.81 11.77 13.93 8.68 15.61 8.04 20.33 13.43 6.49 12.35 4.97 5.40 2.29 2.57 13.41 1.06 10.74 2.29