Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF238 Gene 0 140.82 84.90 39.10 85.59 129.18 445.41 118.18 83.33 134.74 125.38 44.55 78.36 64.25 152.36 92.90 110.63 112.61 144.87 38.82 57.77 17.14 31.15 16.81 2 366538 Transcript 1 1.61 3.25 1.13 1.31 3.75 17.53 8.31 0.97 6.47 1.28 3.48 7.45 4.31 18.64 3.48 9.63 18.49 10.94 7.77 6.38 1.76 1.00 0.00 3 358704 Transcript 0 10.05 0.00 0.61 3.75 16.72 26.59 6.95 1.73 1.85 0.86 0.00 2.16 0.00 4.06 10.15 1.49 0.00 2.31 1.59 3.19 0.00 0.00 0.00 4 IG24 Intergenic 0 6.67 2.76 2.03 3.71 7.30 20.88 10.78 4.08 7.88 7.78 7.30 15.48 10.52 28.81 18.61 23.38 19.14 18.61 4.73 7.66 2.03 2.89 2.47 5 IG24_SR1 SilentIntergenicRegion 0 1.56 0.00 0.49 0.00 0.00 1.80 0.36 0.73 1.08 0.02 1.04 0.96 0.00 3.00 17.09 4.12 5.66 0.00 0.00 0.00 0.00 0.00 0.00 6 IG24_AR1 ActiveIntergenicRegion 0 4.54 0.00 0.69 0.00 0.76 0.76 0.38 1.36 0.58 1.78 1.21 0.68 2.61 14.92 52.60 12.08 11.08 0.96 0.61 0.00 0.41 0.00 0.00 7 IG24_SR3 SilentIntergenicRegion 0 2.52 0.77 2.68 2.08 2.23 9.93 5.02 2.21 6.12 7.43 7.00 6.25 4.10 27.29 14.84 27.34 16.69 20.51 4.17 7.12 3.89 1.28 2.97 8 IG24_AR4 ActiveIntergenicRegion 0 12.15 6.40 3.20 8.41 15.32 41.53 21.50 7.95 15.26 14.15 14.42 30.57 21.44 48.18 9.95 37.54 33.73 34.35 8.88 14.84 3.18 6.01 4.27 9 IG24_SR4 SilentIntergenicRegion 0 13.30 4.81 4.44 4.86 20.35 65.35 34.22 8.77 18.74 17.07 9.50 51.86 24.55 56.13 9.99 44.18 25.45 44.26 12.17 18.57 3.01 7.70 7.37 10 ER1a ExonRegion 0 1.61 3.25 1.13 1.31 3.75 17.53 8.31 0.97 6.47 1.28 3.48 7.45 4.31 18.64 3.48 9.63 18.49 10.94 7.77 6.38 1.76 1.00 0.00 11 ER1b ExonRegion 1 17.26 9.81 3.39 8.85 21.54 84.20 34.03 7.34 21.06 10.64 14.74 22.88 18.03 55.31 13.52 46.78 40.70 62.44 13.91 22.66 5.31 3.80 1.86 12 E1_Da NovelBoundary 0 13.41 16.31 5.94 10.35 17.23 89.95 41.38 15.85 26.68 26.00 12.42 59.12 15.10 50.03 10.75 38.96 33.38 31.84 4.05 20.71 6.30 3.12 12.38 13 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.24 0.00 0.00 0.00 6.82 0.00 0.00 0.00 4.58 21.43 0.00 0.00 0.00 0.00 0.00 14 I1 Intron 1 28.39 14.37 5.10 14.76 40.83 88.32 43.65 18.73 22.61 24.15 13.22 41.58 29.37 48.59 6.97 30.84 23.03 25.99 6.66 15.13 2.83 5.72 2.77 15 I1_AR1 ActiveIntronRegion 1 20.23 9.11 3.72 9.50 38.88 74.48 37.82 14.16 20.95 22.37 9.01 45.96 29.43 35.11 4.38 19.24 12.60 12.10 4.37 14.61 1.11 6.15 2.39 16 I1_SR1 SilentIntronRegion 1 19.55 7.54 4.32 14.55 39.93 82.72 40.38 13.67 18.47 19.43 13.78 45.72 28.27 57.38 6.51 45.31 36.94 36.23 10.46 16.53 6.62 8.31 2.76 17 I1_AR2 ActiveIntronRegion 1 19.57 11.56 5.49 12.63 45.17 113.05 49.42 18.01 26.45 24.79 16.02 36.79 30.39 63.76 5.23 40.58 30.44 35.14 8.93 22.28 3.85 5.72 5.00 18 I1_SR2 SilentIntronRegion 1 35.59 20.72 8.30 19.19 49.49 83.05 58.30 26.06 25.95 28.32 14.85 56.72 31.81 50.52 12.12 29.00 24.08 25.01 4.40 15.99 0.99 4.49 1.26 19 I1_AR3 ActiveIntronRegion 1 52.91 36.94 2.45 11.40 48.70 110.21 57.20 24.43 27.58 18.50 23.52 25.83 23.76 57.22 9.48 29.13 27.95 14.04 4.99 5.53 2.20 6.60 0.29 20 I1_AR4 ActiveIntronRegion 1 42.92 20.54 4.67 18.89 33.97 86.44 36.48 21.83 21.36 26.20 12.80 30.45 28.21 40.97 7.66 25.27 16.43 25.76 5.96 8.90 2.27 4.41 2.41 21 E2_Aa NovelBoundary 0 64.23 34.40 2.69 29.27 43.38 127.09 37.76 20.25 28.91 46.07 9.48 37.66 26.46 55.80 9.52 39.82 36.19 59.86 4.80 15.02 3.09 2.94 4.18 22 ER2a ExonRegion 0 147.31 88.83 40.96 89.60 134.85 464.55 122.72 87.29 140.72 131.37 46.18 81.35 66.75 157.67 97.06 114.22 116.52 149.54 40.16 59.72 17.78 32.59 17.60 23 ER2b ExonRegion 0 10.05 0.00 0.61 3.75 16.72 26.59 6.95 1.73 1.85 0.86 0.00 2.16 0.00 4.06 10.15 1.49 0.00 2.31 1.59 3.19 0.00 0.00 0.00