Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF672 Gene 0 48.20 25.21 52.76 39.33 34.52 35.75 21.99 59.59 37.66 80.23 109.77 35.72 37.74 140.00 121.30 149.82 107.33 70.76 35.95 72.93 29.03 30.22 33.22 2 306562 Transcript 0 55.31 36.96 52.26 43.51 50.78 47.31 27.07 60.54 39.70 70.06 99.49 25.85 31.86 114.18 115.17 144.15 104.28 73.40 41.66 77.12 29.17 30.04 34.24 3 428515 Transcript 0 0.00 0.00 0.19 0.21 1.10 0.38 0.27 0.28 0.57 1.06 1.40 0.05 0.00 0.54 3.44 1.85 1.78 0.85 0.66 0.45 0.23 0.00 1.52 4 423362 Transcript 0 0.00 0.17 0.31 0.18 0.69 0.31 0.79 0.44 0.79 0.00 0.17 1.22 1.65 3.57 2.50 3.81 5.86 1.18 0.27 1.82 0.38 0.00 2.00 5 394454 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 306576 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 10.34 10.23 8.70 3.76 8.19 13.65 4.37 7.23 5.35 17.53 36.34 4.78 6.14 39.89 41.43 45.58 38.42 23.12 13.64 29.83 14.85 4.24 12.99 8 E1a_E4a KnownJunction 0 6.82 39.66 26.64 21.88 38.62 44.12 11.88 51.34 27.63 48.75 69.02 12.30 12.01 79.11 46.11 80.75 52.92 71.34 26.26 80.41 29.34 16.90 24.50 9 ER2a ExonRegion 0 0.00 0.00 0.38 0.42 2.21 0.76 0.55 0.55 1.14 2.12 2.80 0.11 0.00 1.07 1.68 3.69 3.55 1.71 1.32 0.90 0.46 0.00 3.04 10 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 0.00 0.35 0.63 0.35 1.38 0.63 1.59 0.88 1.57 0.00 0.34 2.44 3.31 4.67 4.99 7.63 2.18 2.36 0.55 3.64 0.75 0.00 4.00 12 E3_Da NovelBoundary 0 31.26 17.23 148.69 109.58 4.33 10.62 42.35 115.46 112.79 98.72 17.48 5.70 12.17 3.00 5.56 67.93 37.96 85.93 22.40 41.55 8.65 25.66 18.78 13 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 9.54 0.00 0.00 0.00 0.00 0.00 0.00 14 E4_Aa NovelBoundary 0 0.00 0.00 4.44 2.76 23.26 0.00 1.81 6.53 2.92 1.53 2.32 0.00 0.00 0.00 4.45 0.00 4.77 0.00 4.52 9.27 0.00 0.00 0.00 15 ER4a ExonRegion 0 15.86 29.22 37.03 39.36 32.33 40.26 29.81 65.02 35.45 91.19 151.59 66.60 44.07 191.49 140.35 189.23 139.52 103.04 53.05 97.17 40.65 29.94 48.99 16 E4a_E5a KnownJunction 0 37.78 56.11 61.88 47.11 19.78 40.77 23.76 109.30 53.30 140.97 231.58 48.92 52.43 326.98 241.30 263.95 261.99 122.16 96.10 177.69 34.22 106.42 46.10 17 ER5a ExonRegion 0 37.70 23.79 44.67 29.58 17.32 29.19 15.90 70.69 39.04 116.88 193.93 61.46 70.83 215.51 100.80 191.38 206.53 95.13 47.26 107.41 52.41 54.04 28.64 18 E5_Da NovelBoundary 1 14.52 3.03 3.16 5.36 15.11 0.00 6.27 11.75 9.95 12.65 12.58 6.15 46.10 19.07 4.45 41.44 38.80 10.16 0.00 22.75 3.15 11.82 8.37 19 E5a_E6a KnownJunction 0 15.71 32.76 36.13 28.13 24.11 29.07 13.96 66.87 40.16 123.08 163.09 51.77 40.09 156.69 66.26 181.23 144.65 74.95 44.42 81.94 34.22 44.33 29.02 20 I5 Intron 0 21.14 7.77 11.80 8.28 15.62 5.52 17.21 13.15 7.64 12.42 18.74 12.32 10.92 26.07 13.50 32.31 27.39 17.78 10.64 19.84 4.21 11.32 9.27 21 I5_AR1 ActiveIntronRegion 0 22.49 7.42 11.84 9.27 17.34 5.62 18.15 13.78 7.77 12.56 19.31 13.55 10.90 26.53 12.43 31.13 27.80 18.22 10.91 20.35 4.47 11.82 9.53 22 I5_SR1 SilentIntronRegion 0 15.23 11.09 13.89 3.27 6.86 5.65 14.10 11.33 7.72 13.38 16.82 6.48 11.74 27.73 22.66 45.48 29.02 18.35 10.59 19.17 2.87 9.78 8.88 23 E6_Aa NovelBoundary 0 13.85 3.09 13.96 3.16 18.93 5.11 10.20 3.90 6.19 15.85 9.27 12.60 6.82 6.95 18.42 8.63 3.74 9.41 4.71 9.46 0.00 5.51 4.01 24 ER6a ExonRegion 0 37.46 32.96 71.30 58.29 48.01 53.45 34.86 93.72 60.87 146.68 184.63 79.03 78.01 225.32 154.92 268.42 161.67 98.77 63.21 125.51 44.56 70.64 46.76 25 E6_Ab KnownBoundary 0 58.31 35.65 99.97 68.36 42.11 67.40 31.22 97.43 57.12 148.57 148.25 95.43 89.77 197.95 100.25 264.29 152.13 122.20 46.87 107.38 39.41 75.62 44.30 26 ER6b ExonRegion 0 30.92 38.38 74.09 44.96 19.39 33.61 18.31 79.79 48.43 130.96 146.23 64.15 62.68 181.93 115.81 180.71 149.59 74.04 33.88 106.11 41.81 39.87 36.47 27 E6_Da KnownBoundary 0 19.56 34.47 57.33 42.95 11.71 9.43 5.79 64.77 51.91 136.11 73.65 24.76 33.11 50.15 53.77 49.30 63.39 31.26 13.27 73.89 5.87 24.86 7.43 28 ER6c ExonRegion 0 25.55 15.11 65.27 41.43 22.42 30.91 22.30 77.18 51.02 122.47 134.71 44.18 51.88 172.70 112.97 170.93 124.79 78.94 36.53 86.10 35.15 32.00 45.22 29 E6_Db KnownBoundary 0 42.53 35.65 78.00 53.47 33.11 32.99 27.95 88.51 52.46 127.19 143.35 25.21 60.06 201.78 108.78 189.52 141.19 141.77 26.35 102.27 53.75 38.45 27.15 30 ER6d ExonRegion 0 15.07 15.11 38.60 21.63 13.43 27.40 13.92 48.27 31.88 84.60 97.23 47.85 35.50 156.77 94.09 125.00 112.42 53.42 17.41 55.23 28.26 27.38 25.80 31 E6_Dc KnownBoundary 1 13.19 17.43 7.10 6.29 10.36 4.49 1.90 15.28 17.53 35.78 64.07 12.60 0.00 59.57 73.06 47.68 34.03 18.20 7.91 21.28 13.41 10.90 7.43 32 E6c_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER6e ExonRegion 0 39.78 17.86 52.61 28.76 19.47 29.48 13.39 56.53 35.47 83.80 108.72 25.22 23.89 160.84 126.23 148.53 97.86 80.96 26.21 72.97 32.62 23.34 31.73 34 E6_Dd KnownBoundary 0 130.10 52.16 94.23 78.94 43.38 97.33 56.13 142.28 92.16 163.11 220.53 30.76 41.23 242.22 227.95 329.74 251.33 131.86 85.18 161.33 65.18 68.52 70.77 35 ER6f ExonRegion 0 116.49 60.72 104.33 81.23 97.86 93.82 58.33 120.33 81.85 143.20 197.07 48.48 66.93 223.91 210.85 323.16 221.40 151.71 74.64 125.15 50.25 58.86 73.45 36 E6_Ac KnownBoundary 0 86.31 75.18 102.15 112.54 108.15 62.29 51.63 129.38 91.20 131.87 205.95 37.21 87.66 360.18 295.20 377.94 179.24 128.84 91.58 148.61 44.42 65.21 90.23 37 ER6g ExonRegion 0 165.69 67.65 128.43 111.49 115.27 96.02 60.51 144.48 83.21 141.95 224.67 73.97 97.41 246.36 276.60 308.67 211.66 148.18 85.21 139.37 46.57 60.21 78.19 38 E6_De KnownBoundary 0 154.03 61.44 84.12 115.40 102.38 45.49 78.12 129.14 76.39 144.25 123.40 81.03 93.66 156.40 300.64 167.22 135.67 72.42 69.27 116.58 29.84 80.83 52.75 39 ER6h ExonRegion 0 87.61 37.23 69.37 67.18 58.45 37.65 33.69 63.25 43.96 70.77 95.55 37.83 42.36 113.81 162.30 127.11 104.39 47.43 52.11 73.09 22.22 40.15 26.01