Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NLRP3 Gene 0 9.15 1.35 1.45 1.48 4.62 2.53 3.64 5.01 20.76 3.62 0.40 5.53 4.06 26.37 9.71 2.33 1.90 0.29 0.76 2.08 0.72 1.40 1.69 2 366497 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 7.35 0.00 0.00 0.00 0.00 23.78 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 391828 Transcript 0 1.32 0.00 0.00 0.00 1.78 0.00 0.00 0.00 1.13 0.13 0.00 0.00 0.00 8.18 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 348069 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 336119 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 366496 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 474792 Transcript 0 3.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 391827 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 1.67 0.00 0.00 0.29 0.00 0.00 0.87 0.00 3.06 0.18 0.00 0.00 0.00 15.43 3.51 0.00 0.00 0.00 0.00 0.00 0.00 0.11 0.00 10 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 7.35 0.00 0.00 0.00 0.00 23.78 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.31 8.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 1.69 0.00 0.00 0.55 0.00 0.00 0.26 0.00 2.47 0.23 0.00 0.00 0.00 3.57 0.58 0.00 0.00 0.00 0.00 0.00 0.00 0.42 0.00 13 ER2b ExonRegion 0 3.36 0.59 0.00 1.50 0.78 0.00 0.96 4.54 12.06 0.52 0.00 2.95 1.04 7.79 1.42 0.00 0.00 0.00 0.00 0.00 0.04 0.62 0.00 14 E2_Ac KnownBoundary 0 0.00 0.00 0.00 3.36 0.00 0.00 0.00 9.69 13.37 1.10 0.00 0.00 0.00 26.90 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2c ExonRegion 0 3.89 0.00 0.00 2.10 2.24 4.60 2.21 4.14 8.34 1.35 0.00 0.00 0.23 31.26 6.28 0.00 0.00 0.00 0.00 0.00 1.73 3.35 0.00 16 E2_Da KnownBoundary 0 7.04 0.00 0.00 0.00 0.00 0.00 0.00 1.81 2.86 1.13 0.00 0.00 0.00 9.71 12.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E2a_E2e KnownJunction 0 3.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER2d ExonRegion 0 14.85 16.34 1.41 0.55 11.42 9.07 18.51 1.90 5.40 1.03 3.29 22.11 30.93 24.50 36.07 21.13 13.26 3.28 10.83 20.39 9.20 7.08 17.25 19 E2_Ad KnownBoundary 0 16.08 0.00 0.00 3.70 4.33 0.00 2.25 2.01 11.69 0.00 0.00 0.00 0.00 7.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER2e ExonRegion 0 2.75 0.00 0.00 2.07 2.38 0.68 3.90 1.41 9.52 1.27 0.00 3.22 0.07 15.51 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E2_Ae KnownBoundary 0 3.78 0.00 0.00 2.03 0.00 0.00 12.01 3.74 15.13 0.00 0.00 6.30 0.00 16.60 5.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER2f ExonRegion 0 4.04 0.00 0.00 1.77 0.00 0.00 6.38 1.92 12.24 1.07 0.00 5.12 7.57 18.53 1.52 0.00 0.00 0.00 0.00 0.00 0.00 0.52 0.00 23 E2_Af KnownBoundary 0 2.82 0.00 0.00 1.43 0.00 0.00 3.93 2.09 7.99 3.12 0.00 6.30 8.28 25.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER2g ExonRegion 0 4.44 0.38 1.35 0.69 2.23 1.69 2.36 1.71 9.46 2.20 0.00 3.23 5.28 29.68 3.47 0.00 0.00 0.00 0.00 0.00 0.00 1.84 0.00 25 E2b_E3a KnownJunction 0 10.67 0.00 0.00 0.00 4.33 0.00 1.72 2.55 22.22 1.67 0.00 6.30 6.82 45.97 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER3a ExonRegion 0 6.84 0.00 3.10 0.10 0.56 1.19 2.86 2.91 18.02 1.57 0.00 10.54 2.19 37.95 6.43 3.24 1.87 0.00 0.00 0.00 0.00 0.89 0.00 27 E3a_E4a KnownJunction 0 10.52 0.00 0.00 1.33 0.00 6.81 1.90 1.73 18.06 3.04 0.00 30.91 0.00 42.67 14.83 4.36 7.95 0.00 0.00 0.00 0.00 0.00 0.00 28 ER4a ExonRegion 0 6.11 0.06 0.95 1.34 3.74 2.10 2.47 2.35 14.32 1.60 0.00 5.12 2.27 34.83 6.82 1.32 1.35 0.08 0.00 0.00 0.13 1.45 0.52 29 E4_Da KnownBoundary 0 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E4a_E5a KnownJunction 0 10.82 0.00 0.00 0.00 0.00 0.00 6.49 0.00 1.59 1.05 0.00 0.00 0.00 29.14 16.19 3.42 7.67 0.00 0.00 0.00 0.00 0.00 0.00 31 E4a_E6a KnownJunction 0 6.37 0.00 2.19 1.50 0.00 0.00 0.00 2.55 4.43 0.00 0.00 0.00 0.00 4.94 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER4b ExonRegion 0 3.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER5a ExonRegion 0 7.19 0.00 0.00 0.77 3.15 2.23 2.18 1.17 2.92 0.67 0.00 4.25 1.23 20.95 9.11 1.04 2.68 0.00 0.00 0.00 0.00 1.24 0.84 34 E5a_E6a KnownJunction 0 24.30 0.00 0.00 3.56 0.00 0.00 0.00 2.55 1.79 1.10 0.00 0.00 14.12 16.54 15.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER6a ExonRegion 0 10.00 0.00 1.68 1.77 5.35 3.09 2.37 5.17 6.28 2.54 0.58 0.00 4.77 27.30 11.94 1.30 2.53 0.00 0.00 0.00 0.00 0.62 0.00 36 E6a_E7a KnownJunction 0 24.97 0.00 0.00 0.00 7.47 2.78 0.00 3.94 5.18 0.00 0.00 0.00 0.00 28.72 13.35 4.36 4.39 0.00 0.00 0.00 0.00 0.00 0.00 37 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 3.23 0.00 0.00 2.30 6.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER7a ExonRegion 0 17.67 0.02 2.18 2.93 7.12 2.52 3.97 2.61 6.83 2.49 0.58 1.06 0.33 24.70 16.07 1.36 1.99 0.00 0.00 0.00 0.00 0.00 0.21 39 E7a_E8a KnownJunction 0 17.71 0.00 0.00 4.00 3.57 10.68 4.50 4.72 3.39 0.00 0.00 0.00 6.82 31.49 13.35 0.00 4.21 0.00 0.00 0.00 0.00 0.00 3.67 40 I7_AR1 ActiveIntronRegion 0 0.46 1.05 0.00 0.00 0.00 0.00 0.00 3.40 21.21 3.40 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E8_Aa NovelBoundary 0 0.00 0.00 0.00 1.90 0.00 0.00 0.00 8.17 25.55 6.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER8a ExonRegion 0 24.82 0.58 2.77 2.96 7.34 4.57 5.52 9.03 45.37 8.79 0.70 2.13 3.21 26.99 15.10 0.00 1.37 0.00 0.00 0.00 0.00 0.00 2.70 43 E8a_E9a KnownJunction 0 14.08 0.00 0.00 9.59 7.39 4.49 14.40 18.36 80.00 9.46 2.21 0.00 0.00 35.91 10.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.01 44 ER9a ExonRegion 0 20.42 0.46 3.79 3.20 3.10 2.43 3.54 17.09 75.79 10.74 1.03 2.20 1.40 29.72 13.34 0.89 1.74 0.00 0.00 0.61 0.00 0.00 3.01 45 E9a_E10a KnownJunction 0 13.41 2.83 7.39 3.16 4.24 15.67 6.18 25.06 99.07 10.18 0.00 0.00 0.00 50.80 15.95 0.00 3.55 0.00 0.00 0.00 0.00 0.00 3.76 46 ER10a ExonRegion 0 28.70 0.24 7.19 3.16 6.45 7.28 4.61 31.46 96.02 21.16 0.99 3.64 0.00 35.75 18.05 0.00 0.96 0.89 0.00 7.51 0.00 0.00 0.56 47 E10_Da KnownBoundary 0 26.00 0.00 8.16 3.56 7.98 7.33 8.13 27.15 75.72 26.14 0.00 0.00 0.00 37.08 19.04 0.00 4.77 2.45 0.00 17.77 0.00 0.00 0.00 48 ER10b ExonRegion 0 12.03 0.61 4.52 2.63 5.69 2.03 2.15 16.80 68.70 11.49 0.63 3.32 1.80 22.83 11.36 0.97 0.31 0.17 0.00 5.82 0.00 0.68 0.42 49 E10_Db KnownBoundary 0 13.34 2.57 1.24 0.00 4.33 2.84 1.81 4.48 28.15 6.61 0.00 17.11 0.00 18.78 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 50 ER10c ExonRegion 0 9.86 0.78 0.05 1.10 11.13 1.09 1.22 7.73 21.30 9.18 0.00 11.48 0.59 7.49 7.93 0.53 0.00 0.00 0.00 1.27 0.00 0.75 0.00 51 ER10d ExonRegion 0 0.71 0.00 0.00 0.00 5.35 0.00 0.00 0.00 2.26 0.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00