Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PPPDE1	Gene	0	61.49	85.86	54.71	61.96	77.18	109.82	83.00	48.14	41.00	71.61	89.44	102.01	89.59	90.94	64.52	93.76	75.13	52.58	43.13	86.26	58.90	171.20	84.70
2	302550	Transcript	0	0.69	1.80	0.00	0.16	0.00	5.43	1.60	0.00	0.85	1.07	1.28	0.00	0.00	1.62	1.56	1.27	0.08	4.26	0.89	1.32	0.80	0.52	4.21
3	263831	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	484738	Transcript	0	1.86	1.38	5.27	5.45	1.12	2.42	4.32	3.35	2.82	2.35	4.20	2.93	3.39	3.68	2.92	4.97	5.43	3.83	3.37	6.60	2.40	1.12	2.10
5	418162	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	391840	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	346571	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	366530	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	0.69	1.80	0.00	0.16	0.00	5.43	1.60	0.00	0.85	1.07	1.28	0.00	0.00	1.62	1.56	1.27	0.08	4.26	0.89	1.32	0.80	0.52	4.21
10	E1_Ab	KnownBoundary	0	6.67	19.21	0.00	1.76	0.00	57.58	25.31	0.00	3.30	2.95	12.06	0.00	0.00	9.71	4.70	20.34	9.44	26.70	9.51	16.11	8.53	8.82	47.21
11	E1_Ac	KnownBoundary	0	3.70	13.22	1.18	2.06	4.16	49.80	26.01	4.07	1.56	7.33	12.79	0.00	0.00	9.24	13.35	16.06	8.88	58.82	12.71	17.90	32.43	3.00	37.30
12	ER1b	ExonRegion	0	5.15	18.48	0.00	1.36	2.21	50.79	21.59	0.00	1.24	6.18	12.27	0.00	0.00	10.24	7.69	11.89	3.30	27.31	9.56	17.48	22.04	5.89	48.14
13	ER1c	ExonRegion	0	1.80	8.77	0.93	3.56	2.92	16.70	4.83	2.57	4.52	12.37	30.28	2.38	10.24	29.79	10.82	29.57	31.68	32.44	10.04	20.52	32.88	33.63	35.48
14	E1_Da	KnownBoundary	0	0.00	0.00	3.46	5.26	0.00	0.00	1.72	0.00	0.00	1.64	2.58	0.00	0.00	0.00	8.90	4.10	4.77	13.97	8.19	14.13	2.72	3.12	4.01
15	E1a_E5a	KnownJunction	0	0.00	56.50	6.12	19.98	19.52	15.45	10.25	9.41	18.06	37.15	73.44	18.61	6.82	65.57	27.81	84.59	86.30	95.92	30.02	71.78	52.02	131.16	113.02
16	ER1d	ExonRegion	0	0.41	1.42	5.07	3.49	1.03	3.98	1.44	3.75	4.44	6.29	3.49	3.62	0.20	7.83	4.12	7.05	6.67	9.82	8.68	9.76	3.80	1.47	1.77
17	E1_Ad	KnownBoundary	0	3.78	8.09	6.12	3.46	0.00	0.00	2.03	4.81	9.49	13.40	4.58	6.30	6.82	14.36	0.00	24.01	3.83	10.40	0.00	8.18	0.00	0.00	3.84
18	ER1e	ExonRegion	0	3.27	11.36	7.35	6.60	4.50	5.31	5.08	4.97	7.95	10.44	9.11	5.42	4.02	11.71	0.80	7.50	10.41	13.90	7.09	14.13	12.45	2.09	6.99
19	E1_Ae	KnownBoundary	0	0.00	15.92	7.86	16.78	9.93	2.16	0.00	4.07	8.10	21.22	17.43	0.00	0.00	14.89	5.07	29.31	4.77	25.74	0.00	38.80	24.83	3.12	12.21
20	ER1f	ExonRegion	0	2.28	8.18	8.16	17.41	5.67	7.89	2.71	6.26	10.38	12.77	14.75	5.93	4.49	17.99	7.98	24.00	16.94	18.68	11.67	23.13	14.28	3.33	10.95
21	E1b_E2a	KnownJunction	0	0.00	0.00	6.18	5.83	0.00	0.00	0.00	2.55	1.68	0.00	2.37	0.00	0.00	0.00	0.00	0.00	4.21	0.00	0.00	2.36	2.35	0.00	0.00
22	E1b_E5a	KnownJunction	0	3.11	5.99	0.00	7.26	10.87	5.56	1.90	0.00	1.68	7.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.44	4.80	9.78	0.00	3.12	0.00
23	ER2a	ExonRegion	0	5.19	2.72	4.56	7.05	2.33	3.28	11.52	3.74	2.34	0.77	6.73	5.17	9.96	3.21	4.62	7.86	5.42	1.67	1.44	7.68	1.06	1.88	4.53
24	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	1	6.55	54.29	12.71	24.49	32.55	88.47	37.62	10.58	29.32	43.90	77.77	55.99	58.98	67.19	20.15	78.70	91.34	60.39	26.57	74.85	70.79	113.74	68.23
27	E5a_E6a	KnownJunction	0	14.08	82.16	16.62	22.37	57.89	164.68	88.33	17.70	39.29	42.04	95.18	49.37	26.30	65.93	40.42	69.55	80.69	33.58	43.11	98.30	97.18	127.67	45.50
28	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	1.27	0.00	14.20	4.50	2.38	5.32	9.83	19.58	0.00	0.00	18.42	0.00	11.79	3.55	0.00	3.76	5.88	5.31	15.74	12.38
29	E5a_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.81	0.00	1.24	1.67	4.11	0.00	0.00	4.71	0.00	8.54	0.00	0.00	0.00	2.88	0.00	5.51	0.00
30	ER6a	ExonRegion	1	14.14	51.90	15.99	29.00	45.00	80.12	46.78	21.44	29.41	62.12	93.58	54.21	69.40	91.80	25.43	75.98	98.32	53.66	29.89	100.86	65.22	139.11	59.55
31	E6a_E7a	KnownJunction	1	6.37	55.25	19.84	42.09	24.62	63.43	32.33	32.65	25.40	80.51	96.29	93.33	181.64	92.77	9.64	132.70	102.20	78.02	36.99	105.91	59.37	190.68	77.17
32	E6a_E7b	NovelJunction	0	0.00	6.51	1.39	2.06	3.82	2.44	0.00	0.00	1.33	2.58	4.63	0.00	6.17	2.47	0.00	12.56	3.65	6.09	0.00	3.26	0.00	16.90	11.87
33	ER7a	ExonRegion	1	10.94	52.53	26.55	40.43	31.66	60.52	30.89	29.38	26.35	80.86	104.70	125.55	193.07	107.19	10.64	159.01	102.33	76.07	33.45	103.19	54.36	179.18	74.39
34	ER7b	ExonRegion	1	26.35	40.56	24.83	40.21	42.46	76.83	47.63	33.16	41.08	83.91	130.72	117.12	197.23	136.81	28.48	177.08	115.10	90.30	32.52	115.68	60.66	201.83	98.53
35	E7_Da	KnownBoundary	1	48.16	36.51	31.81	34.46	61.97	105.85	75.39	37.99	56.80	92.70	120.29	90.18	165.90	156.63	49.45	155.00	156.24	91.40	33.13	131.86	63.07	220.20	123.18
36	ER7c	ExonRegion	1	19.55	45.80	18.58	30.75	44.56	109.67	50.11	34.34	46.59	80.89	150.41	135.49	167.84	138.58	34.99	146.73	163.76	105.76	39.52	114.29	93.91	189.58	97.06
37	E7b_E8a	KnownJunction	1	7.04	74.00	18.30	37.49	56.11	121.41	83.34	26.25	43.43	84.56	105.92	97.38	162.16	134.03	35.60	151.07	141.37	118.14	35.48	95.43	124.11	170.78	85.88
38	I7_AR1	ActiveIntronRegion	0	9.08	6.15	7.57	11.01	7.75	7.41	12.11	4.41	7.78	4.30	2.02	14.55	18.53	4.26	5.01	3.71	5.06	4.27	0.61	9.57	1.53	12.81	10.76
39	I7_AR2	ActiveIntronRegion	0	27.96	10.17	8.96	15.73	4.91	7.49	4.47	7.17	6.64	10.37	2.26	8.66	11.33	5.31	5.98	3.59	6.60	3.43	0.00	11.70	1.65	9.33	14.87
40	I7_AR3	ActiveIntronRegion	0	45.96	12.20	9.80	16.16	10.32	16.50	3.97	3.95	9.88	9.50	1.93	4.33	0.00	9.98	5.80	5.94	19.81	5.02	0.00	18.24	5.04	3.27	12.59
41	I7_AR4	ActiveIntronRegion	0	42.73	9.15	6.43	15.42	12.71	16.50	6.21	3.02	8.72	6.67	1.57	2.44	8.50	8.53	8.34	6.69	21.25	7.51	0.00	19.02	7.71	6.51	10.09
42	I7_AR5	ActiveIntronRegion	1	39.51	8.13	6.13	11.13	16.95	14.36	5.30	3.46	8.44	6.88	0.00	8.66	18.76	6.23	8.70	5.94	19.81	9.24	0.00	19.15	8.81	9.03	11.26
43	I7_SR2	SilentIntronRegion	0	16.40	4.07	6.28	8.86	14.72	3.67	4.80	4.97	8.34	6.02	1.93	17.32	18.76	3.45	6.53	5.94	16.09	9.93	0.00	10.90	7.99	8.33	8.81
44	I7_AR6	ActiveIntronRegion	1	5.14	3.20	5.95	5.84	15.67	1.83	4.92	5.19	8.65	5.57	1.93	30.31	19.43	7.42	7.46	4.25	11.79	11.09	0.00	9.73	10.07	10.12	10.49
45	ER8a	ExonRegion	1	14.25	54.98	19.40	29.52	39.07	77.57	54.34	29.29	40.75	64.97	103.37	133.01	136.15	167.62	32.83	167.28	123.92	134.97	57.79	95.73	132.00	170.48	138.17
46	E8_Da	KnownBoundary	1	18.15	55.52	17.15	38.02	56.88	117.83	62.71	40.29	31.02	72.55	122.14	116.89	81.00	207.90	32.76	209.18	102.76	117.27	77.93	120.16	118.92	220.50	178.07
47	ER8b	ExonRegion	1	31.31	45.43	24.34	45.92	67.34	140.76	97.12	39.29	40.42	63.41	127.64	72.68	73.79	154.69	34.97	153.06	107.85	105.08	49.22	102.96	90.85	197.42	129.82
48	E8_Db	KnownBoundary	1	20.82	39.14	12.24	23.37	84.80	80.64	66.91	21.73	14.41	29.90	60.49	57.02	49.51	84.88	6.18	102.11	56.66	17.66	26.92	78.30	21.07	102.32	74.52
49	E8_Dc	KnownBoundary	1	32.38	54.00	10.91	24.44	68.42	61.27	55.07	28.14	30.38	33.28	79.18	45.31	99.34	68.69	11.62	79.81	75.36	24.54	46.12	62.13	29.96	140.16	100.39
50	ER8c	ExonRegion	1	30.69	54.23	20.12	38.50	95.21	91.08	73.81	35.00	33.55	50.46	99.22	109.68	123.89	132.50	29.98	134.98	101.23	37.88	48.05	95.92	43.34	174.67	123.83
51	ER8d	ExonRegion	0	97.54	129.74	85.19	93.71	117.20	158.07	122.94	72.26	57.76	101.83	119.35	145.86	121.72	115.61	98.64	119.62	93.72	59.02	58.97	116.27	71.90	243.87	111.81