Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RP11-378J18.3	Gene	0	1.57	1.51	0.14	1.43	1.89	2.15	5.34	0.81	1.01	1.47	1.06	3.68	2.57	1.02	1.20	2.91	2.59	2.20	1.37	3.83	2.07	1.55	0.81
2	433391	Transcript	0	0.59	0.57	0.05	0.54	0.71	0.81	2.01	0.30	0.38	0.55	0.40	1.39	0.97	0.38	0.45	1.09	0.97	0.83	0.52	1.44	0.78	0.58	0.30
3	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	E1_Da	NovelBoundary	0	3.78	5.53	16.14	22.44	3.57	7.21	7.60	24.69	26.04	12.68	115.19	18.46	0.00	24.43	15.95	23.50	135.39	18.82	14.40	16.30	27.80	19.66	20.49
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	Ix_AR2	ActiveIntronRegion	0	10.88	12.77	12.72	17.45	10.68	6.10	14.44	8.24	5.84	6.12	3.03	28.74	21.11	8.39	7.83	7.48	6.16	1.35	3.80	17.74	0.99	6.06	5.66
7	Ix	Intron	0	2.97	10.11	8.15	10.87	13.65	6.66	18.32	4.11	14.90	6.21	4.07	18.43	17.24	7.44	2.89	6.63	8.42	3.64	2.23	11.80	2.53	8.50	4.68
8	Ix_SR1	SilentIntronRegion	0	2.97	10.12	8.16	10.89	13.66	6.67	18.34	4.11	14.92	6.22	4.07	18.45	17.26	7.45	2.90	6.64	8.43	3.64	2.24	11.82	2.53	8.51	4.69
9	Ix	Intron	0	3.17	5.48	6.78	11.32	8.18	7.36	16.35	5.87	16.32	7.99	5.79	18.81	17.13	8.16	2.93	6.06	7.13	3.37	3.44	16.45	1.98	8.24	3.70
10	Ix_SR1	SilentIntronRegion	0	3.18	5.50	6.80	11.35	8.20	7.38	16.38	5.88	16.36	8.01	5.81	18.85	17.16	8.18	2.93	6.07	7.14	3.38	3.44	16.48	1.99	8.26	3.70
11	Ix	Intron	1	27.59	4.61	0.00	6.91	10.61	39.57	14.25	2.94	5.21	6.78	29.66	54.41	20.17	15.86	11.12	15.16	3.74	4.19	9.03	6.03	2.50	9.45	6.66
12	Ix_AR1	ActiveIntronRegion	0	28.19	4.71	0.00	7.03	10.86	40.39	14.58	3.01	5.32	6.92	30.31	55.50	20.63	16.20	11.37	15.43	3.83	4.28	9.23	6.17	2.55	9.66	6.81
13	Ix_AR1	ActiveIntronRegion	0	20.45	6.90	2.23	5.94	15.85	12.66	10.63	12.25	14.72	7.34	6.28	18.12	20.82	5.67	5.10	12.02	9.17	1.86	4.44	9.09	3.66	12.45	3.95
14	Ix	Intron	0	37.10	14.84	8.93	17.57	48.50	66.77	29.28	37.59	39.59	20.19	6.25	12.36	14.71	5.78	7.21	6.71	4.47	5.60	11.02	19.85	7.62	57.52	14.80
15	Ix_AR1	ActiveIntronRegion	0	3.65	2.63	3.01	7.09	20.53	14.49	11.48	10.45	14.89	4.30	5.90	4.94	3.49	6.65	2.00	5.65	1.84	3.24	4.82	5.86	1.01	4.66	5.72
16	Ix_SR1	SilentIntronRegion	0	8.98	11.71	0.55	2.23	17.62	36.87	12.19	10.61	7.60	3.54	2.10	0.45	13.02	5.18	0.00	9.43	2.22	0.96	4.61	7.30	1.90	9.23	6.48
17	Ix_AR3	ActiveIntronRegion	0	55.20	20.69	13.03	25.18	67.60	94.82	40.73	54.24	56.62	29.79	7.91	17.04	20.17	6.31	10.46	7.30	6.18	7.74	14.90	28.12	11.07	87.01	20.61
18	Ix	Intron	0	55.54	32.84	21.87	34.16	78.49	102.65	53.98	61.01	71.09	54.51	30.43	40.95	66.42	29.41	24.96	25.20	15.99	13.49	22.29	54.68	30.83	114.11	32.01
19	Ix_AR1	ActiveIntronRegion	0	55.83	33.01	21.99	34.34	78.91	103.20	54.27	61.33	71.46	54.80	30.59	41.17	66.76	29.56	25.10	25.33	16.08	13.56	22.41	54.96	30.99	114.72	32.18
20	Ix	Intron	0	111.98	40.02	23.57	44.02	73.56	83.73	42.63	41.45	62.18	46.71	31.11	36.43	56.99	28.67	35.02	30.79	21.31	14.79	22.85	44.08	23.36	97.46	35.80
21	Ix_AR1	ActiveIntronRegion	0	56.47	31.35	10.82	31.31	66.64	72.82	36.51	32.08	54.02	40.02	21.78	41.83	53.69	23.60	19.08	19.39	15.66	5.46	20.76	25.87	11.77	97.00	20.90
22	Ix_SR1	SilentIntronRegion	0	21.39	8.99	1.42	6.46	13.66	37.06	16.10	4.18	9.88	7.67	4.17	5.92	27.40	11.97	21.53	12.36	10.60	5.06	5.36	14.33	17.63	18.53	14.84
23	Ix_AR2	ActiveIntronRegion	0	137.68	44.85	29.52	50.70	79.09	90.27	46.30	46.82	67.82	51.14	35.99	35.81	59.77	31.46	41.88	36.10	24.03	18.86	24.49	52.55	28.16	101.42	42.59
24	Ix	Intron	0	22.50	14.98	6.72	8.18	23.79	30.33	19.41	23.09	25.71	17.70	6.85	7.34	11.29	4.98	5.80	7.02	6.65	8.30	9.52	26.91	9.18	43.14	14.49
25	Ix_AR1	ActiveIntronRegion	0	22.56	15.02	6.74	8.21	23.86	30.41	19.47	23.15	25.77	17.75	6.87	7.36	11.32	4.99	5.81	7.04	6.67	8.32	9.54	26.98	9.21	43.26	14.52
26	Ix	Intron	0	8.69	3.58	2.14	0.00	20.39	22.57	7.76	1.51	4.32	3.01	3.40	0.00	11.32	5.38	7.70	12.20	3.87	2.70	16.81	11.23	16.77	25.65	6.89
27	Ix_SR1	SilentIntronRegion	0	8.89	3.66	2.19	0.00	20.87	23.11	7.93	1.55	4.40	3.08	3.48	0.00	11.59	5.50	7.85	12.48	3.96	2.76	17.16	11.46	17.16	26.23	7.05
28	E2_Aa	NovelBoundary	0	646.56	505.30	1191.62	1374.22	435.23	359.68	557.69	1407.03	1306.09	1078.88	196.63	142.40	122.56	98.83	160.83	663.33	425.43	1805.29	404.62	498.81	204.48	229.63	469.75
29	ER2a	ExonRegion	0	1.78	1.71	0.16	1.62	2.13	2.43	6.03	0.91	1.14	1.66	1.20	4.16	2.90	1.15	1.36	3.28	2.92	2.48	1.55	4.33	2.34	1.75	0.91