Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF678 Gene 0 8.76 33.44 9.26 18.34 34.92 36.91 46.98 23.32 23.63 31.13 13.23 33.96 34.73 15.06 4.34 8.42 16.85 16.06 6.33 57.42 4.11 15.09 6.68 2 498759 Transcript 0 3.92 17.41 3.84 9.23 16.87 13.29 20.89 10.04 9.22 12.66 3.17 10.34 11.33 5.65 1.13 2.26 4.21 5.65 4.49 20.48 1.72 5.95 2.30 3 330346 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 343776 Transcript 0 3.86 10.59 3.40 4.81 12.27 17.92 20.62 11.93 16.21 14.79 15.23 23.41 20.97 11.87 2.49 9.32 14.47 12.64 7.72 37.74 8.67 9.07 4.39 5 465266 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 440339 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 497098 Transcript 0 0.00 2.25 0.00 0.56 0.74 0.01 2.56 0.00 0.00 0.92 0.00 0.00 1.07 0.00 0.00 0.55 0.00 0.77 0.00 1.23 0.00 0.00 0.00 8 ER1a ExonRegion 0 2.12 3.39 0.00 0.91 2.38 1.43 2.35 0.58 1.78 0.00 0.86 0.00 2.08 3.25 0.00 0.00 1.83 2.46 7.43 10.17 2.45 0.23 0.00 9 ER1b ExonRegion 0 3.17 9.66 0.61 3.07 6.69 16.96 9.27 3.46 3.24 0.57 1.93 0.00 4.69 7.31 0.00 0.00 3.30 4.85 16.72 26.60 5.51 2.08 1.47 10 E1_Ad KnownBoundary 0 14.00 44.53 12.89 13.48 48.30 120.27 76.00 12.03 20.78 9.21 17.74 0.00 0.00 19.72 0.00 4.36 27.68 69.06 39.53 107.44 25.70 17.45 16.39 11 ER1c ExonRegion 0 8.90 21.39 6.93 7.24 21.31 72.40 38.62 8.17 7.92 5.50 11.53 0.00 4.69 16.24 0.00 3.79 17.30 19.62 27.13 61.41 15.43 9.20 9.32 12 ER1d ExonRegion 0 11.39 21.89 7.21 5.71 9.40 50.89 25.48 11.85 14.55 11.33 13.88 4.09 8.04 9.41 1.45 4.23 14.01 24.56 11.15 37.43 14.81 4.49 3.71 13 E1a_E2a KnownJunction 0 0.00 0.00 8.46 6.79 0.00 2.61 8.92 6.45 8.25 6.37 13.90 0.00 12.50 31.08 0.00 0.00 18.51 27.07 17.60 36.43 11.06 0.00 13.06 14 E1a_E3a KnownJunction 0 0.00 2.96 0.00 0.00 0.00 0.00 2.25 6.61 9.90 3.30 12.37 0.00 0.00 7.53 0.00 7.86 4.49 11.28 9.22 9.20 13.53 3.12 3.33 15 E2_Aa NovelBoundary 0 169.59 153.79 59.70 68.92 92.44 61.56 89.61 73.11 42.77 61.54 26.80 25.21 41.23 29.20 25.47 26.83 17.11 22.01 13.18 21.16 39.23 30.86 16.22 16 ER2a ExonRegion 0 8.79 11.16 5.69 9.05 14.22 8.81 15.15 11.34 12.72 12.86 10.32 2.77 2.07 33.92 6.27 6.43 18.62 40.52 17.19 44.09 6.43 8.24 17.69 17 E2_Da NovelBoundary 0 0.00 2.96 2.78 3.10 18.42 2.21 3.89 7.72 6.28 5.67 2.05 0.00 0.00 6.77 0.00 0.00 7.11 14.38 4.24 27.61 0.00 2.39 6.49 18 E2a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2b_E3a KnownJunction 0 0.00 8.29 4.64 3.76 19.52 10.51 27.60 10.97 8.48 8.76 7.58 0.00 13.15 12.60 0.00 3.76 25.53 23.26 0.00 42.89 6.18 5.51 8.71 20 ER2b ExonRegion 0 0.00 7.26 2.45 2.73 17.20 9.17 17.78 8.64 9.88 8.68 6.07 0.00 9.38 14.15 0.00 3.40 19.33 34.58 0.46 41.95 4.41 7.44 11.75 21 ER3a ExonRegion 0 3.08 17.97 4.30 4.50 15.91 36.55 29.10 18.78 20.14 20.64 17.18 8.90 24.63 14.30 6.24 14.86 19.70 46.18 11.19 66.48 13.41 10.65 8.12 22 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E3a_E5a KnownJunction 0 3.70 20.13 10.35 5.16 35.23 56.50 15.77 19.14 20.60 26.30 14.79 25.21 27.27 21.78 0.00 3.50 16.08 19.07 3.76 41.80 5.87 8.63 3.59 24 E3a_E6a KnownJunction 0 0.00 5.85 0.00 2.06 0.00 8.69 12.59 0.00 6.31 4.73 0.00 6.30 0.00 2.24 0.00 8.63 8.51 15.67 0.00 42.57 6.18 5.14 11.52 25 ER4a ExonRegion 0 0.00 4.51 0.00 1.13 1.48 0.02 5.12 0.00 0.00 1.83 0.00 0.00 2.14 0.00 0.00 1.10 0.00 1.55 0.00 2.45 0.00 0.00 0.00 26 ER5a ExonRegion 0 4.57 22.35 5.16 4.82 13.42 45.84 19.91 19.88 20.43 30.44 19.42 12.20 27.40 14.78 3.09 12.26 25.15 17.93 4.26 51.42 9.16 4.87 4.32 27 E5a_E6a KnownJunction 0 3.26 21.25 6.03 2.06 10.19 25.10 7.64 16.84 21.06 18.43 15.32 19.06 45.94 14.07 0.00 20.68 22.63 18.53 0.00 63.28 5.75 0.00 8.11 28 ER6a ExonRegion 0 7.76 28.81 12.66 4.16 14.27 35.45 26.70 17.86 27.58 28.04 19.22 41.37 58.89 22.38 5.64 21.14 35.21 30.80 0.00 96.45 12.12 11.23 11.26 29 ER6b ExonRegion 0 11.38 16.93 10.78 17.43 23.57 36.82 30.11 22.41 27.82 28.86 25.01 44.51 55.99 21.28 10.02 10.59 27.65 19.52 4.08 83.61 5.92 12.54 10.32 30 E6_Db KnownBoundary 0 23.34 14.08 15.58 22.97 21.48 29.64 30.74 32.69 30.96 37.47 13.85 47.42 38.63 4.77 0.00 4.36 17.77 11.48 0.00 69.67 0.00 2.88 7.34 31 E6_Dc KnownBoundary 0 114.17 85.64 14.16 23.04 115.62 113.06 197.72 74.10 81.89 52.84 37.33 127.24 183.92 91.00 13.23 37.00 91.63 15.05 42.07 175.84 20.14 53.82 49.25 32 ER6c ExonRegion 0 25.40 12.20 9.80 19.76 26.76 38.51 39.06 31.11 27.79 30.97 27.06 34.64 60.97 17.05 0.00 5.94 39.61 12.93 6.37 104.25 6.61 12.50 8.81 33 ER6d ExonRegion 0 7.73 18.23 6.79 9.62 24.54 35.83 38.99 17.25 22.52 26.27 18.09 46.81 41.95 16.21 4.99 10.78 24.46 14.00 6.21 66.27 3.81 15.01 5.45 34 E6_Dd NovelBoundary 1 3.78 23.35 5.23 15.62 7.30 2.84 13.69 26.04 25.23 20.84 0.00 18.91 80.35 11.89 0.00 0.00 4.68 1.99 4.80 62.00 0.00 19.23 0.00 35 I6 Intron 0 2.70 33.37 3.23 11.58 20.77 21.26 28.36 13.16 16.10 27.21 5.51 31.28 44.49 9.28 2.35 4.67 9.08 5.24 3.13 47.87 0.87 11.06 3.46 36 I6_SR1 SilentIntronRegion 1 2.03 40.00 0.48 8.47 27.26 22.00 29.26 11.94 17.90 24.23 1.40 32.10 48.36 9.22 3.92 1.85 2.39 1.93 1.75 56.24 0.58 11.62 2.40 37 I6_AR1 ActiveIntronRegion 0 3.10 29.45 4.86 13.41 16.93 20.83 27.83 13.89 15.03 28.98 7.95 30.80 42.20 9.31 1.42 6.35 13.04 7.20 3.95 42.92 1.03 10.72 4.09 38 E7_Aa NovelBoundary 0 0.00 50.52 1.36 20.31 10.87 28.51 33.70 13.84 19.62 26.22 20.11 30.61 36.69 16.89 0.00 11.19 26.93 30.80 8.47 54.84 6.18 2.27 4.10 39 ER7a ExonRegion 0 9.64 48.84 11.51 26.79 48.23 38.44 60.31 29.53 25.86 37.98 8.66 31.03 31.89 13.70 3.38 6.77 10.80 14.49 6.03 51.29 2.71 17.62 6.91 40 IG14_SR2 SilentIntergenicRegion 0 4.07 7.83 0.00 0.00 17.95 8.82 13.38 3.70 0.00 3.25 0.00 14.70 7.43 5.59 8.27 1.43 0.00 0.89 1.53 14.25 1.06 3.01 1.41 41 IG14_AR4 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.70 0.00 2.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 IG14_AR5 ActiveIntergenicRegion 0 14.76 38.84 14.28 43.42 25.23 31.62 31.02 28.42 14.23 31.26 5.33 12.62 9.53 7.07 4.94 6.17 3.15 18.33 5.57 38.58 2.10 4.72 2.64 43 IG14_SR3 SilentIntergenicRegion 0 2.13 8.82 3.13 8.07 3.37 6.56 8.52 4.89 6.30 8.02 4.89 5.62 3.27 3.90 0.98 6.33 3.41 5.45 5.10 27.39 0.43 1.27 2.00 44 IG14_AR6 ActiveIntergenicRegion 0 2.71 14.28 7.10 6.49 4.10 14.03 12.03 4.50 6.68 12.26 4.19 3.20 3.21 3.87 1.93 6.40 2.69 8.27 7.35 21.39 1.47 0.79 0.37 45 IG14_SR4 SilentIntergenicRegion 0 4.92 13.97 7.22 8.51 8.92 10.84 9.34 6.31 9.13 8.59 2.08 3.58 3.81 2.26 1.54 4.10 2.79 4.41 4.55 19.58 0.95 0.82 0.78