Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IRF2BP2 Gene 0 344.10 839.00 337.73 514.11 478.50 740.32 250.78 270.79 274.53 355.17 307.69 140.46 195.52 225.66 148.86 178.67 204.34 227.05 182.13 341.01 148.46 248.31 159.15 2 366609 Transcript 1 48.23 108.24 224.85 166.04 116.93 411.38 85.07 210.90 227.89 389.00 554.47 59.14 120.59 403.10 199.04 331.21 379.62 594.01 156.90 480.54 338.13 165.15 198.40 3 366610 Transcript 1 68.53 50.39 357.65 178.20 118.51 227.60 53.83 242.71 316.66 270.45 896.23 86.88 153.40 414.74 146.86 272.49 457.60 511.08 182.50 382.86 355.10 197.97 233.30 4 491430 Transcript 0 21.82 16.04 1.00 2.70 9.97 26.89 9.38 0.00 0.67 0.00 34.28 6.21 6.38 14.14 17.78 22.61 15.39 6.56 12.28 12.91 13.76 10.86 7.69 5 IG32_AR3 ActiveIntergenicRegion 0 1.02 0.74 5.50 0.49 3.87 2.21 1.28 4.01 9.10 2.47 28.87 2.64 0.00 4.22 3.48 6.09 8.36 3.65 4.99 3.33 4.78 12.54 11.68 6 IG32_SR1 SilentIntergenicRegion 0 0.65 0.95 1.97 0.64 0.84 0.00 0.62 2.01 2.00 0.53 9.04 1.09 0.00 2.99 2.04 3.25 4.13 0.72 1.99 0.67 3.07 1.92 2.21 7 ER1a ExonRegion 1 19.07 38.92 101.61 38.89 24.65 124.42 23.13 78.02 106.63 135.25 300.60 29.35 65.43 250.77 106.80 155.18 211.60 255.66 82.07 167.90 187.55 86.53 127.61 8 E1_Da KnownBoundary 1 65.49 104.85 241.42 165.05 79.71 327.77 112.22 228.95 211.40 391.00 414.05 81.03 105.67 411.80 189.26 387.51 255.73 621.84 227.11 431.19 221.84 182.84 210.33 9 E1a_E3a KnownJunction 1 68.53 50.39 357.65 178.20 118.51 227.60 53.83 242.71 316.66 270.45 896.23 86.88 153.40 414.74 146.86 272.49 457.60 511.08 182.50 382.86 355.10 197.97 233.30 10 ER1b ExonRegion 1 48.59 91.89 208.67 151.48 99.39 368.71 79.08 211.88 219.70 377.00 501.79 53.76 127.22 415.71 225.27 347.80 327.55 609.30 169.89 442.64 296.77 171.02 180.91 11 E1b_E3a KnownJunction 1 47.86 124.58 241.03 180.60 134.47 454.06 91.06 209.93 236.08 401.00 607.15 64.52 113.95 390.49 172.82 314.62 431.70 578.73 143.91 518.43 379.50 159.27 215.88 12 Ix Intron 0 121.74 31.82 43.92 45.61 60.87 89.80 28.58 45.53 54.94 26.99 82.35 10.85 30.50 56.15 33.16 70.62 28.70 60.98 36.46 45.32 30.96 36.22 25.95 13 Ix_AR1 ActiveIntronRegion 0 122.41 32.00 44.17 45.86 61.21 90.29 28.73 45.78 55.25 27.15 82.81 10.91 30.67 56.46 33.34 71.02 28.86 61.32 36.67 45.57 31.14 36.43 26.10 14 E2_Aa NovelBoundary 1 235.97 76.30 65.88 101.99 47.62 114.48 34.71 80.46 123.90 47.30 132.88 6.30 45.78 55.57 67.25 63.23 29.73 88.75 19.86 58.68 42.44 52.35 43.36 15 ER2a ExonRegion 0 43.65 32.07 0.44 1.36 11.27 45.60 14.87 0.00 0.18 0.00 44.30 12.42 12.76 25.64 31.11 25.48 19.10 8.51 20.99 17.13 18.93 16.02 11.02 16 E2_Da NovelBoundary 1 181.66 63.15 97.54 64.53 60.19 167.86 37.49 51.67 84.32 36.61 166.73 0.00 20.45 58.69 33.50 63.74 76.86 31.67 21.18 57.46 38.30 19.23 23.90 17 E2a_E3a KnownJunction 0 0.00 0.00 1.57 4.03 8.66 8.18 3.89 0.00 1.16 0.00 24.27 0.00 0.00 2.65 4.45 19.74 11.69 4.60 3.58 8.69 8.59 5.69 4.35 18 Ix Intron 0 76.33 20.05 48.36 46.35 42.97 94.04 23.13 46.45 64.83 22.15 74.61 25.19 49.75 51.20 49.39 59.46 32.55 47.63 18.85 26.98 14.26 35.81 26.48 19 Ix_AR1 ActiveIntronRegion 0 77.16 20.28 48.89 46.87 43.44 95.05 23.39 46.97 65.54 22.40 75.43 25.47 50.31 51.75 49.87 60.12 32.88 48.14 19.04 27.28 14.42 36.20 26.77 20 E3_Aa NovelBoundary 1 139.28 37.03 91.22 66.39 88.29 182.17 48.40 71.96 105.32 49.32 199.68 30.31 87.82 102.13 89.00 93.05 89.29 55.71 32.10 76.89 39.48 49.60 34.74 21 ER3a ExonRegion 1 193.88 218.71 292.96 172.70 115.38 432.59 117.27 208.60 277.48 280.27 498.79 88.89 186.84 352.53 223.84 310.41 383.46 388.04 176.84 353.58 296.26 216.10 224.09 22 E3_Da KnownBoundary 0 397.77 464.79 24.10 25.60 244.74 489.83 336.21 22.88 21.67 7.28 49.12 0.00 54.54 16.13 11.50 27.26 25.34 40.00 12.52 31.77 8.03 0.00 38.07 23 ER3b ExonRegion 0 499.76 1276.47 438.36 767.65 728.49 1039.65 365.69 357.47 338.90 454.41 272.31 194.00 247.49 191.32 148.94 159.60 166.02 181.59 221.59 403.65 104.08 317.42 159.19 24 IG31_SR6 SilentIntergenicRegion 0 9.84 3.27 10.07 5.32 8.54 1.61 5.43 6.44 14.02 4.29 6.25 1.89 4.33 2.66 0.77 4.48 4.07 3.87 4.40 5.03 1.66 3.66 1.11 25 IG31_SR3 SilentIntergenicRegion 0 11.41 3.72 8.95 3.08 10.05 4.76 4.13 12.70 15.87 2.20 5.62 3.92 8.03 4.75 2.91 2.23 1.75 2.78 1.10 4.76 0.09 3.73 0.17 26 IG31_AR2 ActiveIntergenicRegion 0 16.30 5.44 17.08 5.20 5.95 1.51 4.18 10.62 14.17 3.08 4.72 0.88 5.35 5.68 6.16 2.45 1.60 2.67 3.67 7.03 0.23 3.12 0.48