Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C1orf58 Gene 0 65.29 74.61 41.10 80.81 118.87 87.97 77.02 69.01 63.07 69.62 55.63 140.81 128.92 68.21 64.97 66.97 56.22 21.36 36.79 89.37 40.98 136.40 52.14 2 340934 Transcript 0 69.71 118.66 36.95 86.54 141.15 125.35 129.03 83.06 93.85 93.92 104.75 227.52 242.67 109.37 73.12 139.74 119.40 35.44 62.03 155.78 79.88 190.94 106.13 3 496267 Transcript 0 7.32 5.21 11.02 7.85 11.57 2.49 6.74 13.43 8.24 4.62 8.42 6.74 4.90 8.42 8.87 8.95 8.94 2.78 3.47 8.45 1.98 6.95 3.20 4 426638 Transcript 0 0.00 0.25 0.00 0.00 1.00 0.00 0.83 0.00 0.00 0.00 0.00 0.00 4.69 4.47 0.73 0.00 0.00 0.00 0.00 0.00 0.28 1.56 2.57 5 473962 Transcript 0 0.00 2.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.64 2.68 6.15 0.00 0.00 0.00 4.36 0.00 2.07 0.00 0.00 0.00 0.00 0.00 6 469236 Transcript 0 1.20 0.00 0.10 1.59 2.81 0.21 5.37 0.52 1.99 1.23 2.35 4.65 9.98 1.47 0.00 3.65 1.99 1.65 2.40 2.89 0.79 3.56 0.31 7 489191 Transcript 0 0.00 15.33 1.60 0.70 0.00 7.58 4.88 0.00 4.11 7.10 4.71 6.15 6.57 1.24 2.23 0.00 2.38 0.97 1.98 12.02 5.62 3.09 1.96 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 0.00 0.00 1.52 1.57 0.00 0.00 9 ER1b ExonRegion 0 2.91 5.28 4.57 3.42 13.18 19.95 14.95 13.63 14.28 14.23 23.36 12.71 7.81 21.77 13.41 28.17 24.92 14.78 8.49 40.04 30.37 26.63 29.83 10 E1a_E3a KnownJunction 0 0.00 0.00 10.38 1.83 4.16 0.00 3.89 5.87 1.56 1.10 4.79 0.00 0.00 7.12 4.45 0.00 4.58 0.00 0.00 0.00 0.00 0.00 0.00 11 E1a_E5a KnownJunction 0 3.33 5.79 2.84 3.10 23.77 28.90 18.33 22.14 17.97 19.18 27.32 86.28 40.58 41.97 4.45 11.45 34.69 20.06 0.00 46.85 26.32 20.21 27.91 12 ER2a ExonRegion 0 0.00 0.25 0.00 0.00 1.00 0.00 0.83 0.00 0.00 0.00 0.00 0.00 4.69 4.47 0.73 0.00 0.00 0.00 0.00 0.00 0.28 1.56 2.57 13 ER2b ExonRegion 0 0.00 4.07 0.00 0.00 8.03 12.84 6.36 0.00 0.74 0.46 3.48 0.00 4.69 7.80 6.38 0.59 0.00 1.11 0.00 1.28 3.97 3.33 5.87 14 ER2c ExonRegion 0 6.03 11.18 1.59 3.13 18.60 30.26 14.83 2.59 3.33 4.42 5.32 0.00 5.16 22.90 14.94 5.65 0.00 4.25 6.05 6.17 12.89 6.35 11.01 15 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 6.85 0.00 3.18 0.00 2.16 0.00 0.00 0.00 0.00 0.00 0.00 4.06 0.00 3.00 3.15 0.00 11.27 16 E2a_E5a KnownJunction 0 25.49 67.22 8.46 17.98 61.97 106.93 50.12 12.40 7.96 16.52 19.27 0.00 6.82 54.98 39.19 40.93 14.49 21.80 45.74 49.28 33.92 27.49 47.38 17 E2a_E7a NovelJunction 0 5.63 11.58 0.00 1.27 0.00 16.47 6.54 0.00 4.54 2.12 2.00 0.00 0.00 6.59 4.45 13.76 0.00 0.00 3.67 4.86 3.09 5.45 8.11 18 ER2d ExonRegion 0 11.99 43.25 6.70 12.99 41.92 75.67 33.54 10.60 5.11 10.93 13.66 1.44 13.44 40.28 26.30 35.86 15.40 15.27 27.82 32.06 31.00 28.75 46.01 19 ER3a ExonRegion 0 14.63 10.42 11.66 13.88 18.98 4.99 9.58 20.98 14.92 8.13 12.05 13.49 9.79 9.72 13.30 17.90 13.30 5.56 6.94 16.90 3.95 13.91 6.40 20 E3_Da NovelBoundary 0 49.79 29.47 6.18 17.65 7.89 0.00 14.40 24.19 18.43 19.99 5.21 32.26 47.56 19.01 24.97 12.05 31.60 7.67 0.00 55.61 2.72 19.78 8.28 21 I3 Intron 0 16.27 8.96 1.71 7.81 14.55 2.06 8.44 10.62 9.32 7.69 8.52 20.34 13.29 9.01 6.30 13.93 10.83 2.58 5.08 9.97 6.40 11.33 5.78 22 I3_SR1 SilentIntronRegion 0 16.39 9.03 1.72 7.87 14.66 2.08 8.50 10.70 9.38 7.75 8.58 20.49 13.38 9.08 6.35 14.04 10.91 2.60 5.11 10.04 6.42 11.41 5.82 23 E4_Aa NovelBoundary 0 7.04 3.16 8.63 16.38 25.38 2.67 17.84 15.90 7.44 5.61 14.79 44.26 41.39 23.49 9.77 19.57 25.99 2.49 4.80 13.55 11.86 15.49 12.12 24 ER4a ExonRegion 0 23.52 14.95 4.40 18.57 27.01 6.29 19.58 23.09 20.07 7.92 12.00 27.85 34.71 22.63 15.20 37.97 19.30 8.56 22.45 29.28 20.79 21.22 21.99 25 E4a_E5a KnownJunction 0 0.00 0.00 0.00 5.49 4.33 0.00 16.96 1.52 6.39 3.12 7.74 12.30 27.11 2.12 0.00 8.72 4.39 5.97 9.60 8.82 3.15 13.35 0.00 26 E4a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 5.00 0.00 0.00 0.00 4.57 2.53 0.00 6.33 0.00 0.00 0.00 0.00 0.00 0.00 8.82 8.90 0.00 0.00 27 ER5a ExonRegion 1 26.19 47.33 15.64 34.88 67.97 74.50 64.38 32.68 44.52 50.03 67.72 57.73 56.92 79.17 34.57 75.52 79.87 26.47 39.91 124.35 70.61 97.89 71.46 28 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E5a_E7a KnownJunction 0 17.86 33.88 14.19 42.42 35.06 33.67 41.69 39.35 44.82 48.35 57.70 80.28 88.79 69.75 35.85 69.21 80.97 48.25 67.11 128.73 98.78 80.58 57.53 30 ER6a ExonRegion 0 1.83 0.00 0.39 0.87 6.91 0.83 4.51 0.55 1.56 1.81 1.66 6.30 12.82 1.42 0.00 5.87 3.55 0.65 0.00 2.75 0.03 0.91 1.25 31 E6a_E7a KnownJunction 0 2.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER7a ExonRegion 0 32.02 48.73 19.03 51.92 76.55 63.79 63.86 59.32 67.61 65.95 97.51 112.32 119.49 90.39 52.90 110.36 105.04 48.84 53.59 149.79 106.52 142.38 106.16 33 E7a_E8a KnownJunction 0 30.52 65.98 22.86 58.37 161.21 142.53 96.50 63.58 84.92 63.39 66.39 201.07 259.40 69.05 26.82 98.52 101.82 34.86 13.08 140.94 61.34 136.18 91.42 34 ER8a ExonRegion 1 21.12 79.23 16.79 58.90 122.35 123.01 98.36 69.61 75.34 67.13 77.51 198.90 220.06 99.58 15.53 79.90 98.57 40.94 15.18 132.29 65.68 120.97 53.67 35 E8_Da KnownBoundary 1 34.75 117.02 19.40 65.46 148.98 163.03 135.84 76.77 80.96 81.23 88.76 242.18 159.08 123.61 17.80 67.76 98.27 49.21 17.88 157.88 61.65 133.98 60.61 36 ER8b ExonRegion 1 37.55 98.94 14.07 52.47 86.44 155.51 100.51 82.51 74.56 85.79 109.50 195.30 141.72 123.33 38.03 111.91 105.70 45.43 35.39 158.14 89.35 151.19 67.42 37 E8b_E9a KnownJunction 1 35.12 99.32 10.17 43.75 66.38 134.58 59.93 92.29 71.56 76.74 94.60 218.92 193.01 126.14 47.72 136.12 66.11 30.59 49.32 150.14 105.95 142.12 44.64 38 E8b_E10a KnownJunction 0 0.00 30.65 3.19 1.40 0.00 10.16 9.76 0.00 8.22 9.64 6.90 12.30 6.82 2.47 4.45 0.00 4.77 1.95 3.95 15.21 2.35 6.18 3.93 39 E8b_E10b KnownJunction 0 0.00 2.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.64 2.68 6.15 0.00 0.00 0.00 4.36 0.00 2.07 0.00 0.00 0.00 0.00 0.00 40 ER9a ExonRegion 1 21.12 98.61 15.00 55.81 64.72 68.42 67.48 66.20 71.66 77.40 89.48 222.88 197.03 94.13 38.41 83.50 100.16 23.48 26.71 126.37 59.04 157.26 48.12 41 E9a_E10a KnownJunction 1 40.75 112.09 14.81 57.20 75.89 75.70 59.22 69.42 71.44 92.11 84.44 208.87 248.52 96.95 18.67 94.59 82.19 26.49 20.42 126.30 56.03 154.74 67.10 42 E10_Ab NovelBoundary 0 25.26 71.11 8.25 40.32 46.69 26.58 64.57 31.67 44.01 61.08 20.53 69.62 104.86 49.21 4.82 43.15 51.52 11.48 28.05 66.99 14.15 113.34 39.44 43 ER10a ExonRegion 1 34.33 121.79 17.56 58.76 94.25 73.56 77.23 69.52 81.52 100.29 87.62 255.92 271.50 111.88 27.72 105.68 101.23 30.18 22.65 143.03 60.23 182.42 81.57 44 ER10b ExonRegion 1 43.06 132.69 26.54 67.21 102.10 76.33 97.37 70.79 100.37 113.29 114.07 290.07 302.14 130.69 49.77 152.46 139.88 50.76 49.02 164.23 71.76 225.70 100.17 45 E10a_E11a KnownJunction 0 60.46 119.12 34.50 70.92 103.40 59.97 88.33 78.49 104.40 99.87 134.46 293.95 252.42 165.87 84.06 145.60 112.67 64.75 78.68 173.34 71.29 235.63 117.72 46 E11_Aa NovelBoundary 0 48.68 3.22 0.00 4.93 7.89 2.90 4.42 2.55 2.34 0.00 4.79 0.00 6.82 4.47 0.00 4.36 0.00 0.00 4.80 8.82 0.00 3.12 0.00 47 ER11a ExonRegion 1 69.46 98.17 26.22 74.54 92.25 101.55 88.33 72.12 106.04 90.05 111.27 281.71 245.53 120.70 49.45 128.61 153.79 41.55 51.62 165.59 79.06 227.44 99.98 48 E11_Da NovelBoundary 1 30.45 69.26 15.29 67.36 63.33 69.68 69.64 47.36 71.82 65.09 70.54 132.94 169.47 78.35 17.68 107.07 115.57 27.65 46.12 103.55 35.09 162.64 62.91 49 E11b_E12a KnownJunction 0 106.17 194.37 25.22 101.62 74.11 70.47 90.67 87.78 114.90 96.09 126.03 265.44 321.73 105.19 61.07 204.22 133.61 48.38 64.47 169.57 111.88 286.82 105.51 50 ER11b ExonRegion 0 68.90 132.52 20.70 92.37 72.25 70.19 78.33 76.92 102.51 92.20 129.83 248.22 278.54 111.16 51.74 188.73 145.97 49.89 64.24 156.86 93.17 264.61 98.38 51 ER12a ExonRegion 0 99.27 190.53 25.41 94.56 87.54 67.50 67.21 82.84 106.54 97.02 130.52 347.59 302.84 113.65 78.20 159.08 109.32 52.44 70.84 165.15 117.43 256.12 111.17 52 E12_Da KnownBoundary 0 120.76 172.14 22.03 89.17 97.03 56.50 67.48 67.07 85.65 75.54 101.18 213.52 228.07 117.96 143.64 86.64 73.12 41.20 49.04 114.35 92.23 195.40 109.86 53 E12_Db NovelBoundary 0 70.01 130.44 16.79 35.46 69.35 40.72 40.28 39.55 63.63 56.57 55.65 160.40 206.32 71.28 48.83 42.55 80.04 8.66 17.79 126.94 32.00 88.54 33.21 54 ER12b ExonRegion 0 93.22 160.21 25.68 77.39 91.79 59.24 60.90 74.77 112.88 95.79 104.12 230.40 250.61 113.41 90.06 80.89 94.86 34.79 46.95 166.79 73.97 173.02 85.42 55 E12c_E13a KnownJunction 0 79.72 207.27 29.66 54.04 143.46 109.08 125.82 65.55 106.71 99.74 102.08 264.24 208.59 100.12 88.51 110.23 127.63 28.15 34.35 226.59 73.52 171.76 99.28 56 ER12c ExonRegion 0 77.55 160.82 27.60 62.26 98.47 78.49 81.24 61.46 104.44 93.17 97.03 224.96 228.31 82.31 67.19 84.29 114.34 17.74 37.46 204.34 65.14 152.85 80.70 57 ER13a ExonRegion 0 59.56 155.76 29.69 88.22 150.62 127.88 168.71 78.12 92.39 92.47 122.76 241.29 267.50 127.53 82.45 146.67 106.78 30.72 58.48 171.57 99.58 215.35 107.49 58 E13a_E14a KnownJunction 1 25.56 131.29 39.62 114.57 158.57 87.45 111.03 98.45 111.37 103.79 84.44 309.70 381.63 106.07 85.05 177.82 95.56 56.17 93.37 159.98 69.25 240.95 114.73 59 ER14a ExonRegion 0 35.83 103.54 38.38 107.80 106.48 129.57 105.30 84.99 99.89 102.73 95.32 338.28 323.90 136.13 100.13 182.68 116.38 43.26 94.51 162.97 86.43 230.84 129.64 60 E14a_E15a KnownJunction 0 43.19 143.66 32.61 122.76 160.61 156.50 156.65 117.68 119.50 110.24 161.83 287.34 355.33 136.74 87.03 189.95 168.86 40.17 114.07 266.79 111.45 328.03 137.01 61 ER15a ExonRegion 0 63.99 123.07 44.06 106.53 152.54 137.11 138.67 110.38 124.19 134.32 147.07 251.88 310.16 147.48 74.97 181.73 178.40 62.85 80.50 167.52 101.62 200.79 137.57 62 E15a_E16a KnownJunction 0 270.86 225.29 57.57 157.22 340.32 283.59 296.55 154.64 177.20 186.99 249.33 424.34 505.49 245.40 143.03 422.11 314.63 62.68 144.29 326.17 148.02 412.65 303.72 63 E15a_E17a NovelJunction 0 0.00 2.50 0.00 0.00 0.00 0.00 2.25 0.00 1.79 0.00 2.68 5.85 6.82 14.54 0.00 0.00 0.00 0.00 0.00 0.00 5.37 2.39 3.59 64 E16_Aa NovelBoundary 0 14.37 2.43 2.69 16.31 28.61 23.17 13.03 8.71 8.80 9.48 2.63 6.00 20.29 4.30 14.83 7.35 21.97 2.40 0.00 0.00 0.00 3.12 0.00 65 ER16a ExonRegion 0 78.44 104.17 55.60 100.87 158.89 142.73 150.49 110.42 102.79 115.26 124.47 240.77 246.67 148.74 85.55 174.00 149.39 58.92 74.56 133.08 121.74 186.88 126.70 66 E16a_E17a KnownJunction 0 70.46 89.72 60.26 91.00 170.03 231.91 229.20 85.60 89.41 75.91 98.97 125.44 147.72 76.40 40.55 77.84 101.26 22.72 33.60 65.45 102.55 150.08 67.61 67 ER17a ExonRegion 0 97.75 92.17 62.52 116.59 171.21 116.32 95.36 90.33 74.23 87.13 51.16 163.20 138.83 70.66 91.62 57.90 44.23 17.34 41.20 92.36 31.25 171.88 47.37