Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EPHX1 Gene 0 175.63 33.88 53.97 80.37 59.40 58.15 33.30 50.84 77.79 29.24 12.40 7.85 5.12 9.31 9.46 7.21 10.15 54.34 22.64 35.27 229.13 290.61 239.54 2 445856 Transcript 0 9.00 0.51 0.92 0.68 0.67 1.38 0.66 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 0.00 0.53 4.96 5.21 13.21 3 272167 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 448202 Transcript 0 5.02 0.67 7.76 3.25 0.92 6.07 2.88 2.15 3.63 1.16 0.33 0.00 0.00 0.00 0.00 0.00 0.75 7.89 2.59 5.72 9.61 14.26 10.67 5 366837 Transcript 0 1.41 1.09 0.50 1.64 0.71 0.00 0.90 0.36 0.25 0.47 0.00 0.48 0.00 0.00 0.00 0.00 0.00 0.74 0.85 5.14 0.29 0.00 1.16 6 467015 Transcript 0 7.94 3.74 3.55 10.32 7.38 3.21 2.38 3.78 2.49 3.11 0.00 0.00 0.00 0.00 0.73 0.29 0.00 0.40 3.19 9.50 5.51 0.52 4.36 7 ER1a ExonRegion 0 9.00 0.51 0.92 0.68 0.67 1.38 0.66 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 0.00 0.53 4.96 5.21 13.21 8 ER1b ExonRegion 0 115.54 16.95 6.19 7.79 12.35 40.01 11.30 4.83 10.99 2.06 1.98 0.00 0.00 2.04 1.56 5.94 0.51 33.12 12.58 11.89 97.70 83.98 151.20 9 E1_Ac KnownBoundary 0 393.11 49.99 20.37 23.57 38.46 117.83 36.52 12.45 29.31 4.75 7.74 0.00 0.00 4.59 4.45 13.07 0.00 80.38 39.34 27.87 240.93 215.91 408.72 10 ER1c ExonRegion 0 451.97 35.27 20.10 26.79 50.07 86.82 42.22 16.25 40.12 8.13 5.69 0.00 0.00 6.54 3.07 6.37 6.88 90.70 22.84 22.49 240.52 200.97 470.87 11 E1_Da KnownBoundary 0 0.00 2.70 0.00 2.00 0.00 2.50 4.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.97 0.00 0.00 8.71 0.00 8.11 12 E1a_E3a KnownJunction 0 835.33 27.10 31.84 45.82 79.03 73.88 58.12 29.16 73.84 13.81 7.05 0.00 0.00 0.00 11.50 0.00 12.53 122.08 7.91 22.82 206.09 189.27 579.27 13 ER1d ExonRegion 0 3.00 1.35 3.46 2.35 1.85 3.79 1.43 2.29 1.10 1.13 0.66 0.00 0.00 0.00 0.00 0.00 1.51 4.08 1.51 3.90 9.22 6.11 6.06 14 E1_Db NovelBoundary 0 68.01 35.52 262.85 225.65 74.02 37.93 39.35 188.45 207.29 133.34 15.79 0.00 26.95 7.71 15.82 21.11 34.97 177.71 25.13 44.04 16.31 2.51 7.60 15 E1b_E3a KnownJunction 0 7.04 0.00 12.06 4.16 0.00 8.35 4.33 2.01 6.16 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.69 3.67 7.54 10.01 22.41 15.28 16 ER2a ExonRegion 0 2.83 2.17 1.00 3.28 1.43 0.00 1.80 0.72 0.49 0.93 0.00 0.95 0.00 0.00 0.00 0.00 0.00 1.49 1.70 10.28 0.59 0.00 2.32 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 329.71 25.51 46.04 62.64 87.60 105.44 46.66 45.33 75.79 34.19 6.01 7.60 2.60 2.31 4.00 2.97 5.21 89.25 36.65 40.07 274.41 195.17 315.60 19 E3_Ab KnownBoundary 0 55.49 16.84 52.75 68.56 26.32 45.37 30.69 57.46 80.73 38.17 8.90 12.00 8.28 12.54 18.91 3.76 4.11 67.86 57.60 45.32 396.73 242.61 229.80 20 ER3b ExonRegion 0 29.66 26.41 84.76 108.08 54.21 56.05 29.11 70.72 117.50 45.34 10.73 12.11 1.84 11.84 5.21 14.52 5.45 163.16 41.27 58.12 370.64 467.25 504.80 21 E3a_E4a KnownJunction 0 54.38 43.08 123.62 145.27 108.32 112.55 46.68 105.85 153.01 58.29 7.42 12.60 0.00 5.47 10.75 23.93 4.77 223.35 76.05 72.74 322.79 808.16 1135.84 22 ER4a ExonRegion 0 94.46 47.38 106.80 126.94 117.70 122.99 60.47 89.07 161.02 59.41 9.78 11.51 3.50 9.99 8.54 8.51 10.58 126.26 52.41 60.86 387.56 624.83 505.04 23 E4_Da KnownBoundary 0 18.15 3.22 10.50 11.19 3.23 0.00 8.13 1.68 9.26 1.29 0.00 0.00 0.00 0.00 0.00 4.36 0.00 1.66 0.00 25.50 0.00 0.00 8.28 24 E4a_E5a KnownJunction 0 421.56 48.28 108.96 169.38 44.23 131.06 69.07 100.88 220.89 75.35 16.37 24.31 0.00 5.36 0.00 7.86 21.79 108.03 37.27 53.50 506.64 780.60 305.77 25 ER4b ExonRegion 0 7.94 3.74 3.55 10.32 7.38 3.21 2.38 3.78 2.49 3.11 0.00 0.00 0.00 0.00 0.73 0.29 0.00 0.40 3.19 9.50 5.51 0.52 4.36 26 ER5a ExonRegion 0 313.63 41.09 84.58 127.80 65.49 83.98 49.62 82.85 161.24 59.43 15.99 12.30 2.66 7.23 6.26 4.19 14.55 87.39 34.32 51.55 453.81 551.09 365.88 27 E5_Da KnownBoundary 0 302.87 51.77 75.54 117.00 91.85 79.39 51.89 70.03 117.01 53.51 4.58 6.30 6.82 9.89 11.74 3.85 12.06 100.73 29.08 65.52 356.08 326.13 446.36 28 ER5b ExonRegion 0 472.71 43.64 96.92 97.77 102.49 83.00 45.54 69.87 158.47 53.09 7.48 8.89 5.92 14.19 8.78 8.02 14.98 116.29 43.76 53.92 401.16 596.05 458.43 29 E5_Db KnownBoundary 0 909.79 58.87 120.25 112.21 177.16 119.59 57.63 80.96 175.78 43.03 24.85 24.01 6.82 16.83 13.35 15.89 22.25 124.36 39.81 49.22 525.54 684.41 627.08 30 ER5c ExonRegion 0 291.32 49.50 70.47 109.85 82.92 71.50 49.59 68.55 108.54 41.54 14.48 10.98 0.61 10.02 12.57 6.44 8.71 69.62 27.13 44.60 374.92 398.40 325.53 31 E5c_E6a KnownJunction 0 211.15 80.91 70.58 100.59 28.35 41.51 37.76 57.38 101.07 51.79 7.42 0.00 0.00 17.78 19.41 3.85 0.00 32.87 17.04 17.45 246.49 350.50 195.40 32 ER6a ExonRegion 0 259.22 68.67 76.31 109.05 70.60 99.00 53.47 65.03 103.51 36.89 7.94 11.22 1.52 5.87 6.56 6.95 9.06 51.55 14.46 39.98 319.76 344.07 250.74 33 E6a_E7a KnownJunction 0 369.25 115.51 118.18 195.68 93.04 100.62 86.21 93.32 132.84 58.42 7.48 18.01 0.00 9.77 6.06 7.95 0.00 83.16 29.84 47.81 369.80 413.08 330.27 34 ER7a ExonRegion 0 294.55 79.91 116.97 207.00 131.88 115.55 74.94 97.86 138.19 56.46 13.26 13.17 2.78 7.67 16.69 10.21 18.37 84.07 37.01 70.97 405.13 571.96 394.82 35 E7a_E8a KnownJunction 0 511.35 118.47 147.27 214.03 104.07 125.61 76.93 141.46 178.35 75.91 7.00 17.11 0.00 7.00 15.20 4.10 17.77 111.76 39.62 83.41 446.28 587.23 371.16 36 I7_SR3 SilentIntronRegion 0 51.59 6.64 4.27 6.58 30.62 3.72 6.34 5.19 5.63 2.31 7.41 8.09 1.05 4.51 4.31 3.32 2.95 0.89 1.43 10.63 8.43 14.90 13.45 37 Ix Intron 1 83.99 5.24 8.11 10.18 52.13 12.87 11.95 20.66 15.03 3.92 32.40 7.99 11.42 19.13 21.86 15.75 10.40 2.24 1.83 4.27 38.81 34.03 45.44 38 Ix_AR1 ActiveIntronRegion 0 84.23 5.26 8.13 10.21 52.28 12.91 11.98 20.72 15.07 3.93 32.48 8.01 11.45 19.18 21.92 15.80 10.43 2.24 1.83 4.28 38.92 34.12 45.56 39 E8_Aa NovelBoundary 0 135.06 2.89 29.21 17.45 77.16 10.39 18.77 13.14 10.50 5.24 22.80 0.00 6.82 17.66 30.78 25.63 4.77 2.03 0.00 6.52 47.75 48.44 51.82 40 ER8a ExonRegion 0 521.15 93.28 132.18 183.36 132.00 131.71 104.93 138.20 181.56 69.93 52.58 11.16 13.51 31.74 42.61 16.20 35.49 104.90 48.39 78.84 506.59 655.91 449.17 41 E8_Da NovelBoundary 0 108.76 0.00 22.65 21.24 32.51 7.61 12.59 29.41 17.88 5.40 47.96 12.60 19.80 23.78 33.75 28.62 26.93 4.85 0.00 2.88 30.39 22.11 46.78 42 E8a_E9a KnownJunction 0 304.05 83.93 175.30 262.47 132.60 122.37 67.66 189.89 208.94 77.98 14.42 11.55 0.00 18.84 8.90 8.03 8.32 141.02 74.26 91.02 475.07 835.35 477.61 43 Ix Intron 1 107.05 1.39 12.20 16.87 49.65 12.61 13.44 27.41 23.53 6.82 61.72 18.90 30.13 34.11 32.63 27.09 23.24 3.31 0.41 5.24 55.74 56.37 70.60 44 Ix_AR1 ActiveIntronRegion 0 107.18 1.39 12.22 16.89 49.71 12.63 13.46 27.44 23.56 6.83 61.79 18.93 30.17 34.16 32.67 27.13 23.27 3.31 0.41 5.25 55.81 56.44 70.69 45 E9_Aa NovelBoundary 0 224.26 0.00 9.79 29.27 49.32 5.79 10.29 33.27 31.54 8.97 86.39 38.26 59.90 60.10 56.25 67.93 30.29 1.82 0.00 0.00 88.09 187.44 227.66 46 ER9a ExonRegion 0 282.74 73.63 115.13 185.81 136.93 101.18 49.12 130.11 170.08 62.13 57.16 31.78 35.44 43.36 30.90 19.20 24.34 97.17 48.67 70.16 500.47 585.34 508.30 47 E9_Da NovelBoundary 0 78.83 6.18 13.45 9.42 26.66 16.13 12.67 22.63 23.90 9.72 88.13 24.46 12.66 33.96 41.91 27.09 26.55 3.61 4.24 5.82 82.10 53.76 67.27 48 E9a_E10a KnownJunction 0 273.75 44.20 128.44 241.79 88.62 67.86 43.90 166.35 198.72 62.37 19.43 18.76 6.82 26.96 17.80 16.15 12.16 122.99 48.94 70.82 507.75 966.51 792.77 49 Ix Intron 1 102.57 2.58 9.99 8.93 24.31 9.67 8.41 22.65 16.54 5.34 41.74 10.43 17.25 25.81 24.48 12.20 20.32 5.57 4.36 8.31 47.99 39.90 52.51 50 Ix_AR1 ActiveIntronRegion 0 102.95 2.59 10.03 8.96 24.41 9.71 8.44 22.73 16.61 5.36 41.89 10.47 17.32 25.91 24.57 12.24 20.40 5.59 4.37 8.35 48.17 40.05 52.71 51 E10_Aa NovelBoundary 0 118.98 3.35 7.69 13.22 25.04 0.00 7.86 28.55 18.11 4.41 33.53 5.55 26.78 22.90 32.88 31.62 26.27 8.29 0.00 20.26 50.29 46.48 57.28 52 ER10a ExonRegion 0 214.16 29.43 46.09 78.72 49.34 43.83 24.78 51.95 75.27 25.12 18.56 9.23 10.66 15.32 14.06 14.31 16.67 39.89 19.99 31.39 222.97 299.20 230.28