Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CNIH4	Gene	0	37.44	56.00	57.50	70.51	61.17	53.66	50.61	46.07	44.71	79.94	37.78	40.81	35.79	37.07	48.87	32.68	31.38	74.00	62.78	107.64	33.70	81.00	56.58
2	465271	Transcript	0	0.71	8.36	0.00	0.00	2.38	1.83	0.00	0.00	0.96	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	2.83	3.78	0.00	9.72	4.57
3	366858	Transcript	0	0.00	0.00	0.00	0.00	0.00	5.00	0.00	2.30	1.33	0.00	0.00	6.30	0.00	0.00	6.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	366857	Transcript	0	3.78	3.29	17.42	20.98	7.47	4.88	11.35	8.95	16.41	12.52	13.21	0.00	6.17	0.00	13.35	8.12	16.36	8.04	11.48	11.76	0.00	13.35	0.00
5	366860	Transcript	0	13.78	4.85	10.31	9.72	6.31	1.79	4.17	6.03	5.20	6.82	7.05	9.00	8.46	2.39	3.51	3.64	6.06	6.77	5.12	11.17	3.55	7.99	4.43
6	468318	Transcript	0	0.00	0.00	0.00	0.00	0.00	2.16	0.00	0.00	0.00	2.90	4.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.13	2.84	0.00	0.00
7	366856	Transcript	0	14.15	0.00	18.01	7.13	15.45	2.38	1.90	4.11	10.59	4.38	7.84	11.85	14.28	29.20	42.65	12.13	0.00	6.14	13.27	20.45	5.81	14.76	0.00
8	477413	Transcript	0	0.69	1.43	2.61	0.99	4.01	0.34	1.24	1.07	2.36	4.15	5.00	1.37	2.41	6.87	4.80	4.99	3.95	6.54	10.36	7.53	3.38	3.12	4.35
9	469200	Transcript	0	1.85	0.00	0.64	0.00	0.00	1.89	0.00	2.12	2.30	0.33	1.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.24	0.00	0.00	0.00	0.42
10	ER1a	ExonRegion	0	0.71	8.36	0.00	0.00	2.38	1.83	0.00	0.00	0.96	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	2.83	3.78	0.00	9.72	4.57
11	E1_Ad	KnownBoundary	0	3.78	18.88	5.85	4.00	3.90	21.86	1.94	0.00	0.00	1.16	0.00	0.00	0.00	0.00	0.00	3.67	0.00	14.14	21.37	8.69	0.00	19.96	23.13
12	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1b	ExonRegion	0	2.44	12.67	0.57	0.10	4.73	7.62	1.53	0.00	2.47	0.00	0.59	1.67	2.53	5.12	5.58	0.46	0.25	0.00	10.78	7.20	3.22	13.46	14.46
14	E1_Af	KnownBoundary	0	25.12	42.82	10.38	3.43	65.11	77.63	73.09	1.97	4.69	13.24	18.37	0.00	0.00	0.00	20.27	8.72	14.12	14.88	64.94	28.44	17.98	108.44	72.39
15	ER1c	ExonRegion	0	18.65	33.05	2.68	1.36	41.98	46.99	37.40	0.00	3.01	4.01	14.74	4.33	9.38	21.22	34.63	5.94	9.28	5.20	57.73	29.92	15.43	71.36	62.77
16	ER1d	ExonRegion	0	21.17	34.57	3.68	1.36	53.51	51.35	47.66	0.00	3.71	5.73	17.40	4.33	9.38	22.74	46.42	5.94	9.90	9.24	66.89	34.04	22.04	85.42	67.54
17	ER1e	ExonRegion	0	25.40	38.64	4.17	2.73	58.87	62.35	63.81	0.00	4.94	7.57	19.33	4.33	9.38	23.39	49.32	11.89	19.81	9.24	76.45	36.17	30.85	119.18	67.54
18	E1_Ag	KnownBoundary	1	52.38	69.07	95.09	94.53	87.10	167.06	239.67	11.62	47.66	110.21	55.17	0.00	6.66	49.97	269.86	38.96	116.88	48.00	47.62	167.08	151.17	208.38	70.60
19	ER1f	ExonRegion	1	24.26	30.72	34.62	33.97	63.55	78.72	65.68	2.59	21.61	40.59	22.23	2.32	9.21	48.55	227.33	11.99	24.87	10.95	71.22	75.84	30.77	125.98	61.04
20	ER1g	ExonRegion	1	41.74	52.76	105.16	108.69	94.54	80.64	71.75	38.94	71.76	108.10	42.01	22.61	63.90	71.53	124.35	32.12	41.77	29.41	50.92	172.10	36.82	115.66	46.46
21	E1_Da	KnownBoundary	0	0.00	0.00	4.44	0.00	0.00	2.16	0.00	0.00	1.24	0.00	0.00	0.00	6.82	0.00	0.00	0.00	0.00	3.86	0.00	0.00	6.05	0.00	0.00
22	E1a_E2a	KnownJunction	1	38.60	65.32	92.22	77.51	38.96	25.27	54.94	51.18	47.77	67.48	40.54	54.62	89.44	36.91	56.99	15.47	30.01	36.81	32.66	64.56	33.48	87.07	48.32
23	E1a_E3a	KnownJunction	0	9.41	3.35	5.06	0.00	0.00	0.00	0.00	2.38	0.00	2.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	2.78	0.00	0.00
24	ER1h	ExonRegion	0	0.00	0.00	1.75	1.05	0.00	0.49	1.75	0.00	1.33	2.32	10.08	0.00	2.25	2.86	1.43	0.00	7.97	1.97	1.53	6.33	5.38	1.03	0.04
25	E1_Db	KnownBoundary	0	0.00	0.00	1.09	1.93	0.00	0.00	0.00	0.00	1.79	2.39	22.53	0.00	0.00	7.42	0.00	0.00	18.42	6.38	4.33	8.88	9.02	2.94	0.00
26	E1b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.16	0.00	0.00	0.00	2.90	4.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.13	2.84	0.00	0.00
27	ER1i	ExonRegion	0	1.39	2.86	3.80	1.99	1.15	0.69	2.47	2.14	2.93	3.81	7.31	2.74	4.81	9.02	4.15	9.99	7.89	11.26	3.31	8.73	3.85	3.11	5.28
28	E1_Dc	NovelBoundary	0	0.00	3.35	18.78	12.59	15.28	7.50	10.60	9.20	9.20	17.84	13.11	6.30	19.32	12.30	11.50	14.61	17.77	27.07	8.85	18.22	2.84	5.57	21.00
29	E1c_E4a	KnownJunction	0	0.00	0.00	1.42	0.00	6.88	0.00	0.00	0.00	1.79	4.49	2.68	0.00	0.00	4.71	5.44	0.00	0.00	1.82	17.41	6.33	2.90	3.12	3.41
30	I1	Intron	0	7.41	6.72	7.99	12.85	9.22	4.82	16.45	6.47	8.47	8.93	10.26	13.13	21.72	12.70	7.92	21.40	14.26	7.40	8.82	18.63	4.17	10.53	7.13
31	I1_SR1	SilentIntronRegion	0	5.65	7.99	6.89	9.90	7.15	4.03	15.29	7.89	10.99	9.67	13.07	16.39	32.76	12.29	8.41	24.76	18.16	8.74	8.76	23.57	5.89	10.65	10.38
32	I1_AR2	ActiveIntronRegion	0	10.37	7.65	10.85	17.26	13.18	4.39	19.31	6.60	5.25	10.48	10.11	12.51	15.85	15.47	7.37	22.18	13.10	6.13	10.29	18.52	4.41	7.81	6.43
33	I1_SR2	SilentIntronRegion	0	9.03	1.72	7.58	14.58	7.54	5.54	18.67	7.06	12.34	7.58	9.25	9.80	17.59	13.38	8.05	20.83	14.41	8.45	8.32	16.18	2.88	8.29	5.93
34	I1_AR3	ActiveIntronRegion	0	3.67	8.61	5.61	8.99	8.74	6.62	10.68	1.98	3.53	5.91	5.17	11.03	12.21	7.30	7.72	12.58	6.95	5.29	6.74	10.20	1.27	18.83	2.26
35	E2_Aa	NovelBoundary	0	7.48	15.98	1.48	10.59	4.33	24.93	26.98	9.53	8.16	8.46	19.69	30.91	34.58	4.59	13.35	23.75	0.00	2.11	8.47	17.39	2.72	11.45	0.00
36	ER2a	ExonRegion	1	43.10	36.87	115.03	81.10	52.93	21.47	50.54	74.32	64.60	136.45	276.10	83.58	113.78	89.28	143.13	49.02	222.50	53.88	114.03	188.07	221.84	170.58	102.74
37	E2_Da	NovelBoundary	1	7.26	31.05	11.92	19.01	3.48	11.53	11.39	9.08	10.82	10.93	2.05	11.85	38.96	2.47	0.00	12.73	9.54	0.00	11.58	18.28	0.00	5.08	6.91
38	E2a_E4a	KnownJunction	1	66.31	57.62	199.46	142.97	89.39	23.68	84.13	126.18	112.41	271.90	814.63	125.14	180.67	203.07	381.61	75.36	703.22	100.65	279.44	396.35	516.58	317.19	243.71
39	I2_AR1	ActiveIntronRegion	0	6.73	10.95	13.43	15.31	14.46	3.03	12.65	6.95	13.83	10.20	2.74	13.96	25.19	2.94	6.71	11.86	4.70	4.24	12.11	18.96	0.00	16.21	4.26
40	I2_SR1	SilentIntronRegion	0	5.98	13.12	10.89	17.42	9.38	3.48	11.67	7.26	8.99	10.07	2.89	10.48	11.96	2.28	7.82	8.74	8.71	6.56	2.95	18.81	0.00	15.85	5.96
41	I2_AR2	ActiveIntronRegion	0	4.23	19.75	9.28	21.22	10.70	5.24	14.00	10.37	2.47	6.88	4.69	0.00	22.78	3.71	11.61	5.10	7.54	7.39	7.74	17.33	0.00	20.54	5.87
42	E3_Aa	NovelBoundary	1	0.00	0.00	16.38	16.61	8.15	2.16	16.65	13.88	16.90	16.82	4.69	5.40	0.00	14.54	27.69	0.00	27.58	14.67	4.80	15.21	3.15	34.11	12.04
43	ER3a	ExonRegion	0	11.33	11.21	14.02	15.69	11.30	2.53	12.52	8.24	12.97	10.55	13.98	8.10	18.56	7.18	10.53	10.92	13.41	14.00	7.28	19.50	7.86	12.82	8.93
44	E3_Da	NovelBoundary	1	7.19	9.01	23.54	19.41	11.63	7.67	13.87	5.91	10.76	14.16	0.00	19.96	12.82	6.71	10.51	12.22	3.93	4.81	0.00	11.89	2.90	13.72	7.60
45	E3a_E4a	KnownJunction	0	20.60	0.00	11.86	13.48	7.64	2.84	0.00	7.48	2.63	7.20	7.16	18.91	6.82	0.00	0.00	0.00	4.77	4.44	8.09	14.00	0.00	11.14	4.35
46	I3	Intron	0	19.40	9.32	10.59	15.55	18.94	11.28	17.44	10.31	11.85	10.81	11.89	12.83	15.24	6.93	15.50	15.00	12.26	4.75	4.44	16.67	3.07	18.26	5.28
47	I3_SR1	SilentIntronRegion	0	15.60	7.45	7.78	12.69	20.35	10.89	15.03	7.01	9.63	6.67	8.51	11.76	11.55	5.23	8.20	15.15	12.20	4.04	6.39	11.91	4.59	12.54	5.92
48	I3_AR1	ActiveIntronRegion	0	22.56	10.88	12.93	17.94	17.83	11.62	19.45	13.05	13.70	14.23	14.67	13.72	18.30	8.33	21.51	14.87	12.32	5.34	2.84	20.61	1.82	22.99	4.76
49	E4_Aa	NovelBoundary	0	21.56	12.17	12.15	21.81	11.63	0.00	15.94	16.68	23.58	17.41	45.70	41.71	40.42	9.24	18.54	36.83	21.41	10.57	4.71	7.67	0.00	21.98	8.02
50	ER4a	ExonRegion	0	41.86	55.16	266.51	226.66	103.98	76.39	71.08	124.11	132.51	249.01	397.30	192.41	174.90	319.56	490.95	276.80	244.91	340.90	338.47	468.20	168.18	637.87	405.46
51	E4a_E5a	KnownJunction	0	22.08	75.84	276.54	222.35	111.12	116.47	115.49	129.18	103.18	186.31	236.48	187.41	206.64	171.11	363.19	181.32	115.47	238.32	151.72	327.26	75.74	277.76	255.24
52	E4a_E6a	KnownJunction	0	3.78	3.29	17.42	20.98	7.47	4.88	11.35	8.95	16.41	12.52	13.21	0.00	6.17	0.00	13.35	8.12	16.36	8.04	11.48	11.76	0.00	13.35	0.00
53	E4a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.00	0.00	2.30	1.33	0.00	0.00	6.30	0.00	0.00	6.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	ER5a	ExonRegion	0	23.85	76.33	251.20	203.34	287.38	255.26	206.10	132.75	101.86	194.97	274.47	204.06	226.37	214.93	302.31	182.88	138.42	251.66	185.60	320.28	75.95	301.00	245.50
55	ER5b	ExonRegion	0	44.41	165.93	260.57	178.97	313.44	301.03	305.38	128.89	100.20	222.38	285.84	244.58	187.60	245.25	348.66	158.09	178.88	134.65	156.99	334.13	132.92	391.55	172.94
56	E5_Db	NovelBoundary	0	17.63	2.50	1.60	14.22	12.31	0.00	19.56	9.20	10.04	1.53	5.05	0.00	6.82	4.94	0.00	8.72	0.00	2.45	4.42	11.63	0.00	0.00	7.68
57	E5b_E6a	KnownJunction	0	71.94	206.08	231.33	147.07	111.46	18.00	90.09	97.76	92.24	202.38	176.57	205.87	101.62	179.65	222.14	115.18	86.86	69.81	97.51	270.24	83.40	324.35	106.70
58	E5b_E6c	KnownJunction	0	14.15	0.00	18.01	7.13	15.45	2.38	1.90	4.11	10.59	4.38	7.84	11.85	14.28	29.20	42.65	12.13	0.00	6.14	13.27	20.45	5.81	14.76	0.00
59	I5_AR6	ActiveIntronRegion	0	16.30	8.04	4.18	10.14	18.37	3.82	12.12	12.87	6.13	6.41	5.63	5.51	13.61	4.04	10.52	6.81	3.44	1.15	0.66	15.05	1.83	3.04	3.67
60	E6_Aa	NovelBoundary	0	5.63	12.50	9.25	11.65	15.62	5.34	14.49	13.35	7.93	11.55	6.79	13.95	26.95	0.00	8.90	0.00	4.30	2.11	8.28	15.92	0.00	8.82	4.35
61	ER6a	ExonRegion	0	108.50	112.96	180.15	141.03	127.47	100.24	106.79	103.83	76.53	195.43	150.68	182.11	155.12	125.80	169.10	94.60	80.56	96.93	123.78	205.35	76.16	335.13	117.42
62	E6_Da	KnownBoundary	1	69.49	117.22	69.90	114.97	65.96	71.83	73.53	70.52	71.12	122.11	22.48	69.32	77.92	27.78	35.97	31.36	25.53	75.69	68.61	113.84	15.94	104.46	64.62
63	ER6b	ExonRegion	1	32.01	107.46	56.41	105.21	71.07	64.80	60.10	53.54	60.09	109.01	16.87	59.54	47.64	24.43	20.44	21.40	20.67	67.30	62.82	120.04	28.28	79.39	48.54
64	E6_Db	KnownBoundary	1	17.11	60.19	33.71	57.40	45.16	60.48	16.69	22.71	17.51	58.67	2.26	26.56	18.83	2.47	14.34	15.38	17.30	80.83	24.66	102.20	30.39	37.17	43.28
65	ER6c	ExonRegion	1	14.64	46.61	35.48	53.68	41.64	49.85	27.57	27.48	36.21	60.12	9.17	24.63	12.75	12.43	9.17	14.66	17.33	78.35	47.06	94.92	19.11	42.02	44.49
66	E6_Ab	KnownBoundary	0	0.00	36.64	28.62	41.59	78.01	46.39	60.72	24.11	43.32	54.23	15.90	31.51	6.82	16.66	21.01	11.62	22.44	73.79	22.02	104.44	21.93	31.84	47.29
67	ER6d	ExonRegion	0	8.38	45.69	38.41	47.02	43.68	39.95	32.64	33.42	49.93	63.50	9.97	18.86	11.13	13.70	6.49	13.09	19.28	85.38	48.36	93.75	29.02	41.19	50.34
68	E6_Dc	KnownBoundary	0	3.56	42.69	18.80	48.51	31.92	35.38	48.18	40.17	43.06	79.99	19.85	13.95	6.82	6.65	11.13	17.43	9.54	80.38	79.16	101.24	32.43	51.50	40.21
69	E6c_E6c	KnownJunction	0	3.70	0.00	1.27	0.00	0.00	2.21	0.00	4.23	3.36	0.00	2.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.47	0.00	0.00	0.00	0.00
70	ER6e	ExonRegion	0	51.19	49.09	41.08	64.39	61.38	54.63	50.80	49.47	44.72	74.72	10.56	18.74	16.15	21.16	24.83	24.57	17.56	93.72	66.60	108.72	29.18	42.61	54.85
71	E6_Ac	KnownBoundary	0	88.46	91.43	79.80	110.54	99.32	39.92	46.81	84.12	51.27	97.03	7.48	0.00	21.91	11.95	18.91	15.81	17.67	82.45	47.62	96.90	37.62	59.15	53.86
72	ER6f	ExonRegion	0	45.67	49.38	72.00	74.56	54.42	43.27	29.39	51.11	42.90	73.68	16.94	22.70	14.47	17.74	28.97	21.88	14.38	52.19	49.23	70.58	20.24	61.52	33.72
73	ER6g	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.57	0.00	0.00	1.24	0.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.84