Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C1orf55 Gene 0 37.21 74.50 49.53 70.90 69.10 73.84 69.33 57.11 57.37 65.82 52.23 73.31 84.65 76.02 74.83 55.81 55.18 46.25 42.59 78.96 37.19 108.27 61.46 2 366818 Transcript 0 4.04 7.38 1.61 0.14 1.66 4.52 6.41 0.37 0.02 0.77 16.22 0.49 0.00 6.40 9.88 6.78 10.36 0.18 8.55 11.25 11.27 8.35 5.34 3 272091 Transcript 0 0.71 2.03 0.00 1.36 7.14 0.00 0.44 2.30 1.65 4.97 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.71 0.00 0.69 1.96 4 366817 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 IG36_SR4 SilentIntergenicRegion 0 13.08 9.79 7.57 11.17 16.14 8.67 9.63 9.56 7.95 7.66 2.58 10.91 6.80 5.92 5.17 7.38 4.58 3.70 3.24 17.47 1.07 1.80 3.23 6 IG36_SR3 SilentIntergenicRegion 0 11.83 5.01 4.13 8.22 16.46 5.74 4.86 6.94 5.97 5.61 1.40 2.15 5.92 4.23 3.64 5.36 3.20 3.75 4.81 9.41 0.45 0.93 1.39 7 IG36_AR4 ActiveIntergenicRegion 0 22.08 8.27 7.46 12.17 23.56 6.16 8.04 14.35 11.60 12.05 2.27 2.55 9.20 2.07 2.30 4.33 3.61 2.42 4.22 10.36 0.90 1.70 4.06 8 ER1a ExonRegion 0 5.20 12.20 3.22 0.27 0.00 4.61 9.38 0.74 0.04 1.54 5.74 0.99 0.00 8.21 5.31 3.57 6.13 0.37 6.10 2.55 5.67 7.14 4.03 9 E1_Ab KnownBoundary 0 0.00 9.08 3.67 5.79 0.00 4.88 4.15 0.00 0.00 0.00 2.37 0.00 0.00 4.94 0.00 3.93 4.21 3.81 25.60 2.49 0.00 8.63 3.67 10 E1_Ac KnownBoundary 0 40.97 64.40 11.59 8.69 0.00 41.28 39.66 9.20 4.98 8.81 14.74 5.85 0.00 37.91 28.56 23.07 32.35 9.37 14.59 27.74 22.67 40.66 43.36 11 ER1b ExonRegion 0 17.87 48.13 11.03 5.91 0.00 34.03 36.63 5.19 5.21 6.12 22.98 4.33 0.00 45.11 36.75 23.78 30.44 3.90 16.63 17.02 23.75 39.12 36.22 12 ER1c ExonRegion 0 13.49 52.49 11.90 14.96 6.37 42.65 37.07 13.72 20.33 20.90 28.62 2.82 9.42 32.63 36.57 28.06 41.43 11.26 17.14 34.92 29.90 40.02 35.72 13 E1a_E2a KnownJunction 1 3.11 17.30 16.50 16.02 7.64 5.22 3.89 17.54 29.80 18.70 70.18 18.91 20.13 20.78 0.00 0.00 43.85 12.89 21.74 22.43 45.78 26.88 18.44 14 ER2a ExonRegion 1 7.38 15.22 21.46 36.92 20.43 9.34 7.18 22.63 39.60 30.20 103.09 17.71 46.05 44.64 42.46 27.56 79.82 40.31 32.53 69.25 61.57 46.72 42.89 15 E2_Da KnownBoundary 1 17.11 25.26 21.82 36.96 25.04 17.43 12.85 21.73 46.12 30.92 143.09 44.56 71.59 74.99 72.81 64.68 127.72 37.31 40.00 122.27 66.90 77.03 69.74 16 E2a_E2b KnownJunction 0 2.89 2.57 0.00 0.00 3.31 4.43 3.44 0.00 0.00 0.00 26.69 0.00 0.00 4.59 14.46 10.00 14.59 0.00 11.01 19.94 16.87 9.55 6.66 17 ER2b ExonRegion 0 12.47 16.43 33.22 65.90 13.02 14.42 9.45 34.34 58.08 52.88 116.60 48.68 85.69 155.87 102.96 97.92 95.82 134.79 70.25 154.11 60.75 145.96 120.24 18 E2_Ab KnownBoundary 0 16.37 22.56 38.44 71.59 9.93 10.85 7.95 38.08 52.34 58.67 90.39 68.27 69.15 212.61 154.27 161.75 90.51 183.10 121.32 179.80 55.72 200.11 185.32 19 ER2c ExonRegion 0 17.37 24.91 36.84 67.18 20.51 41.03 23.67 38.21 46.39 66.62 62.90 44.92 73.97 119.20 89.52 117.65 76.13 141.85 77.44 131.52 58.03 112.81 137.90 20 E2b_E3a KnownJunction 0 13.78 19.93 42.31 68.22 47.45 78.99 71.76 39.80 34.69 70.38 55.01 24.76 70.29 53.45 60.70 73.40 62.65 68.32 20.99 94.66 46.33 66.01 85.02 21 E3_Aa NovelBoundary 0 0.00 0.00 16.53 2.76 0.00 0.00 9.14 1.81 4.28 3.84 0.00 6.30 6.66 0.00 0.00 3.16 0.00 2.57 8.47 0.00 3.09 0.00 8.19 22 ER3a ExonRegion 0 9.03 57.65 39.19 59.94 52.71 120.79 115.56 43.96 40.70 60.44 59.31 40.99 58.94 56.57 60.78 50.97 49.57 49.21 27.45 112.66 55.02 85.35 56.14 23 E3_Da KnownBoundary 0 23.41 102.94 34.18 71.62 60.44 144.52 150.86 57.54 47.54 57.91 60.49 37.51 55.03 70.46 97.41 47.17 67.70 50.61 35.30 138.06 80.25 97.48 59.07 24 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER3b ExonRegion 0 24.30 121.19 34.07 57.56 41.06 75.36 73.89 44.44 52.35 67.05 78.73 56.95 64.58 86.36 70.69 54.24 87.79 87.66 38.04 123.20 85.35 89.19 51.73 26 E3b_E4a KnownJunction 0 64.01 227.59 37.55 62.40 65.37 60.87 45.53 36.31 50.12 78.54 90.55 112.24 63.15 141.45 109.40 71.52 114.45 102.85 71.44 162.03 100.33 106.67 56.94 27 ER4a ExonRegion 1 27.09 76.54 37.68 56.54 32.68 28.38 36.08 39.30 44.82 58.98 69.20 99.79 70.47 103.72 66.00 36.41 104.06 51.76 43.48 106.54 65.95 102.64 55.21 28 E4_Ab KnownBoundary 0 23.26 51.77 42.93 74.78 23.60 24.36 42.44 54.51 64.70 72.39 63.60 62.27 49.51 79.05 80.23 43.49 68.54 72.75 48.28 119.21 58.94 130.24 58.13 29 ER4b ExonRegion 0 19.03 35.77 26.92 47.91 22.71 43.54 32.63 36.64 59.19 60.79 76.33 62.83 75.41 111.14 77.46 57.82 87.18 85.16 40.56 108.25 84.40 88.16 78.02 30 E4a_E5a KnownJunction 1 6.37 45.91 33.12 45.98 43.72 60.82 54.85 47.19 61.95 72.23 91.81 56.42 134.41 137.32 98.52 46.91 139.04 94.51 72.19 105.78 130.10 108.81 107.47 31 ER5a ExonRegion 0 18.94 43.50 34.10 58.18 39.21 73.12 58.75 55.24 74.71 62.42 106.01 75.78 91.79 134.87 90.66 73.32 120.14 86.80 69.95 107.37 94.92 110.55 89.19 32 E5a_E6a KnownJunction 0 30.82 54.27 25.93 41.25 53.48 103.29 68.23 60.99 55.01 65.68 114.66 55.97 110.87 172.29 76.02 98.35 177.47 115.20 53.08 132.05 101.01 132.45 98.00 33 ER6a ExonRegion 0 18.49 51.03 41.63 56.87 55.98 86.42 59.69 50.35 64.87 63.05 95.95 84.11 130.46 132.39 93.83 94.55 101.69 98.61 61.73 104.29 83.33 110.35 112.54 34 E6a_E7a KnownJunction 0 34.75 90.77 62.39 85.44 47.54 73.48 60.02 52.21 59.92 53.91 112.50 137.59 117.04 176.17 97.41 109.03 89.39 87.51 78.68 103.67 105.08 121.00 163.13 35 ER7a ExonRegion 0 25.06 98.69 50.67 79.49 88.32 97.68 78.94 53.65 67.99 64.65 74.10 107.33 125.91 111.78 81.46 71.81 80.89 67.37 56.75 96.51 52.00 135.91 79.15 36 E7_Da KnownBoundary 1 64.53 106.69 47.28 42.95 46.86 75.07 100.38 47.11 65.97 83.14 36.48 88.38 157.78 81.58 94.57 64.43 62.09 31.05 48.10 74.46 11.43 139.43 62.83 37 ER7b ExonRegion 0 48.35 82.99 57.13 79.80 81.38 74.75 76.97 65.38 57.87 71.37 36.03 73.76 77.68 57.01 72.92 46.71 36.24 28.08 37.08 68.15 18.98 111.40 47.71 38 ER7c ExonRegion 0 0.71 2.03 0.00 1.36 7.14 0.00 0.44 2.30 1.65 4.97 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.71 0.00 0.69 1.96