Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TRIM67 Gene 0 1.52 65.85 28.22 46.60 48.70 307.51 36.01 109.25 102.76 60.83 0.05 0.00 0.00 0.20 0.10 0.25 0.10 94.39 17.17 59.20 0.05 0.05 0.16 2 366653 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 366652 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 444294 Transcript 0 2.22 92.73 39.85 65.70 68.30 409.99 47.86 143.42 120.33 73.23 0.07 0.00 0.00 0.32 0.14 0.37 0.17 96.33 19.83 62.37 0.07 0.07 0.18 5 449018 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 456730 Transcript 0 0.00 10.59 6.30 6.36 13.50 75.70 14.62 49.08 43.29 28.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 101.10 8.85 31.51 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.00 3.31 1.11 0.82 0.00 23.46 3.42 2.93 9.02 8.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.84 0.00 6.73 0.00 0.00 0.00 8 E1_Ab KnownBoundary 0 0.00 6.51 3.19 4.86 0.00 57.47 9.63 25.26 32.75 29.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77.73 4.33 23.14 0.00 0.00 0.00 9 ER1b ExonRegion 0 0.00 5.27 5.77 3.16 4.35 46.38 4.62 19.39 29.98 23.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 82.72 9.90 33.53 0.00 0.00 0.00 10 E1_Da KnownBoundary 0 0.00 3.35 5.94 1.83 0.00 17.72 2.21 21.36 23.35 34.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 93.97 9.04 29.79 0.00 0.00 0.00 11 E1a_E1c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1c ExonRegion 0 0.00 1.31 1.81 0.56 0.42 12.81 2.83 3.91 8.83 10.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.24 3.29 18.34 0.00 0.00 0.00 13 E1_Ac KnownBoundary 0 0.00 2.76 3.16 1.93 3.40 13.29 2.21 3.41 11.23 5.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.87 4.05 10.99 0.00 0.00 0.00 14 ER1d ExonRegion 0 0.00 1.63 3.98 2.69 1.29 25.94 2.55 11.82 21.53 14.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.96 4.11 25.02 0.00 0.00 0.00 15 E1_Db KnownBoundary 0 0.00 0.00 0.00 1.40 0.00 14.54 2.08 0.00 7.29 4.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.10 4.80 5.43 0.00 0.00 0.00 16 E1b_E1d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER1e ExonRegion 0 0.00 2.06 0.00 0.22 1.64 6.10 1.60 0.59 2.41 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.29 1.09 6.38 0.00 0.00 0.00 18 E1_Ad KnownBoundary 0 0.00 5.92 0.00 0.00 3.57 13.17 6.45 6.94 6.34 5.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.45 4.14 10.93 0.00 0.00 0.00 19 ER1f ExonRegion 0 0.48 9.79 2.91 2.78 5.13 60.99 9.93 21.74 33.08 20.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64.21 4.59 37.75 0.00 0.00 0.00 20 E1c_E2a KnownJunction 0 0.00 2.70 5.62 11.82 10.36 75.07 3.53 38.90 66.61 42.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 97.91 8.09 61.74 0.00 0.00 0.00 21 I1_SR1 SilentIntronRegion 0 0.29 13.62 4.56 7.80 4.48 5.59 11.22 14.23 14.87 4.29 0.11 0.00 0.00 0.00 0.00 0.00 0.00 10.81 2.55 22.64 0.00 0.00 0.00 22 I1_AR1 ActiveIntronRegion 0 0.00 10.67 7.66 8.54 6.01 9.18 13.52 21.52 10.63 4.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.42 1.97 21.82 0.00 0.00 0.73 23 ER2a ExonRegion 0 0.00 11.35 6.11 13.06 9.53 105.94 9.96 48.36 81.98 44.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 94.29 15.16 78.83 0.00 0.00 0.00 24 E2a_E3a KnownJunction 0 0.00 11.77 5.91 5.16 20.63 141.34 17.53 43.74 92.13 70.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 94.60 9.60 85.65 0.00 0.00 0.00 25 ER3a ExonRegion 0 0.00 13.74 6.35 14.44 25.17 142.95 22.37 51.53 94.88 59.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 114.67 13.08 79.57 0.00 0.00 0.00 26 E3a_E4a KnownJunction 0 0.00 16.44 5.85 23.84 32.43 185.40 11.13 64.08 115.77 57.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 160.59 28.05 119.53 0.00 0.00 0.00 27 ER4a ExonRegion 0 0.00 13.52 5.96 21.84 15.62 152.65 12.38 57.88 111.59 50.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 162.00 28.07 99.88 0.00 0.00 0.00 28 E4_Ab KnownBoundary 0 0.00 8.95 9.08 27.54 0.00 131.97 11.97 64.53 118.52 55.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 163.87 18.54 86.74 0.00 0.00 0.00 29 ER4b ExonRegion 0 1.12 14.15 9.27 15.25 10.70 116.52 9.79 60.45 99.19 51.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 134.29 13.77 63.86 0.00 0.00 0.00 30 E4a_E5a KnownJunction 0 3.19 19.34 9.22 9.52 7.47 196.88 12.14 74.80 83.74 51.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 133.69 0.00 54.20 0.00 0.00 0.00 31 ER5a ExonRegion 0 0.16 24.81 9.99 9.43 20.66 150.92 18.96 63.66 75.79 42.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 122.40 9.80 56.26 0.00 0.00 0.00 32 E5_Da NovelBoundary 0 0.00 2.43 1.09 3.73 3.14 20.50 0.00 1.64 16.17 8.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.70 3.67 4.92 0.00 0.00 0.00 33 E5a_E6a KnownJunction 0 0.00 10.59 6.30 6.36 13.50 75.70 14.62 49.08 43.29 28.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 101.10 8.85 31.51 0.00 0.00 0.00 34 E5b_E6a KnownJunction 0 0.00 15.19 1.18 9.36 12.05 90.29 19.92 4.85 28.93 15.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63.80 0.00 15.66 0.00 0.00 0.00 35 ER5b ExonRegion 0 0.00 12.54 1.23 6.36 5.35 71.82 15.89 6.91 24.29 18.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.43 3.19 17.02 0.00 0.00 0.00 36 ER6a ExonRegion 0 1.48 19.78 6.55 14.79 12.94 111.80 11.77 66.87 65.27 36.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 103.26 9.64 56.53 0.00 0.00 0.00 37 E6a_E7a KnownJunction 0 0.00 17.89 9.40 22.47 7.56 129.87 7.86 54.05 79.51 36.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 115.95 31.15 51.96 0.00 0.00 0.00 38 ER7a ExonRegion 0 0.00 26.52 12.47 21.21 13.55 160.97 15.23 65.77 91.35 45.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 111.72 20.03 67.79 0.00 0.00 0.00 39 E7a_E8a KnownJunction 0 0.00 36.18 18.21 26.20 53.14 196.08 12.72 78.78 104.74 49.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 129.96 18.54 106.36 0.00 0.00 0.00 40 ER8a ExonRegion 0 0.00 18.53 13.67 20.84 15.71 138.03 13.92 54.38 88.90 48.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 119.14 22.73 75.51 0.00 0.00 0.00 41 E8_Da KnownBoundary 0 0.00 8.35 4.38 14.18 14.86 105.96 3.93 42.51 57.41 31.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 88.75 8.66 71.40 0.00 0.00 0.00 42 ER8b ExonRegion 0 0.00 17.53 5.15 15.97 12.77 169.32 16.86 51.99 89.40 37.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 92.42 11.11 71.54 0.00 0.00 0.00 43 E8_Db NovelBoundary 0 0.00 2.89 4.85 1.80 0.00 14.71 8.04 6.16 4.11 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.56 0.00 22.88 0.00 0.00 0.00 44 E8b_E9a KnownJunction 0 0.00 3.22 1.21 11.25 15.37 136.00 7.24 48.02 77.34 33.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62.59 4.24 58.68 0.00 0.00 0.00 45 I8_AR2 ActiveIntronRegion 0 0.00 9.59 4.53 9.19 7.33 15.39 9.67 11.06 11.01 7.61 0.00 0.00 0.00 0.00 0.00 0.00 0.14 22.72 1.73 12.12 0.00 0.00 0.00 46 I8_SR3 SilentIntronRegion 0 0.00 5.24 2.97 8.96 4.69 12.03 8.10 6.78 8.19 6.05 0.00 0.00 0.00 0.00 0.00 0.00 0.75 19.53 4.16 10.12 0.00 0.00 0.00 47 ER9a ExonRegion 0 0.94 18.09 13.27 14.03 11.94 133.20 14.69 69.90 97.14 45.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 126.24 15.54 68.33 0.00 0.00 1.30 48 E9_Da KnownBoundary 0 0.00 15.06 16.50 32.56 7.81 190.06 41.07 98.95 135.70 60.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 187.74 26.26 74.53 0.00 0.00 0.00 49 ER9b ExonRegion 0 0.00 13.98 7.86 17.35 9.14 145.02 16.47 71.84 96.47 42.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 110.79 12.81 64.54 0.00 0.00 0.00 50 E9_Db NovelBoundary 0 0.00 5.99 13.57 8.99 16.81 8.29 1.63 12.53 12.67 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.58 4.71 2.88 0.00 0.00 0.00 51 E9b_E10a KnownJunction 0 0.00 15.79 1.83 11.75 26.91 166.27 7.55 61.65 73.18 35.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75.36 4.14 39.12 0.00 0.00 0.00 52 ER10a ExonRegion 0 0.00 34.36 14.95 25.81 24.37 197.56 24.39 78.40 115.92 52.42 0.00 0.00 0.00 0.17 0.00 0.00 0.00 126.02 17.35 68.91 0.00 0.00 0.00 53 E10_Da KnownBoundary 0 0.00 44.66 16.68 28.93 38.71 335.55 63.82 102.81 109.78 62.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 106.08 4.52 75.87 0.00 0.00 0.00 54 ER10b ExonRegion 0 0.89 45.93 17.70 34.46 36.10 279.69 35.93 101.20 118.05 68.55 0.10 0.00 0.00 0.13 0.14 0.29 0.00 106.09 19.20 68.06 0.00 0.10 0.22 55 ER10c ExonRegion 0 0.00 48.13 14.30 25.44 21.41 299.52 38.39 87.58 82.75 61.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 109.02 9.56 61.70 0.00 0.00 0.00 56 ER10d ExonRegion 0 2.46 97.14 35.86 60.40 74.70 440.57 52.18 141.33 122.90 77.94 0.00 0.00 0.00 0.12 0.20 0.30 0.00 97.41 22.91 60.58 0.22 0.10 0.31 57 ER10e ExonRegion 0 3.55 181.86 57.33 93.89 83.33 564.35 43.79 189.27 139.74 87.08 0.00 0.00 0.00 0.00 0.00 2.97 0.00 57.54 18.32 57.98 0.00 0.00 2.94 58 ER10f ExonRegion 0 3.32 135.13 65.98 102.22 94.09 509.72 55.48 187.73 120.03 73.20 0.12 0.00 0.00 0.70 0.06 0.50 0.52 85.50 17.40 58.47 0.00 0.00 0.01