Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TSNAX Gene 0 41.69 67.57 38.64 68.81 82.57 42.69 47.65 56.95 50.16 68.67 40.02 120.58 88.20 71.61 63.17 48.38 60.97 22.28 31.12 64.57 28.15 86.36 36.19 2 366639 Transcript 0 5.73 1.84 0.14 0.00 1.21 3.55 1.79 0.00 0.48 0.00 0.00 0.00 0.00 1.12 13.25 0.00 0.00 0.00 0.96 0.00 0.00 4.70 0.00 3 357874 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 420593 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 413309 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 476913 Transcript 0 1.10 0.99 9.89 6.10 2.89 1.03 4.73 5.43 0.42 3.03 2.61 5.20 3.19 1.31 4.17 3.82 3.56 0.00 1.37 2.29 0.00 0.09 1.27 7 475168 Transcript 0 14.99 24.34 5.15 35.71 15.26 16.05 15.13 8.00 10.31 18.00 4.61 15.57 9.52 11.29 7.09 13.31 12.59 5.56 7.20 16.12 6.72 6.16 10.72 8 ER1a ExonRegion 0 5.73 1.84 0.14 0.00 1.21 3.55 1.79 0.00 0.48 0.00 0.00 0.00 0.00 1.12 13.25 0.00 0.00 0.00 0.96 0.00 0.00 4.70 0.00 9 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 0.00 0.00 0.00 10 E1_Ac KnownBoundary 0 0.00 0.00 1.39 0.00 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.60 0.00 0.00 0.00 0.00 11 ER1b ExonRegion 0 0.00 1.02 1.23 0.00 0.00 1.83 0.00 1.30 1.24 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 8.76 0.00 0.00 0.00 0.00 12 ER1c ExonRegion 0 36.54 45.92 18.55 28.94 70.19 68.40 63.52 36.14 36.84 43.79 55.18 26.69 20.15 76.63 38.83 60.55 110.37 23.96 34.19 89.01 78.15 63.31 54.94 13 E1a_E2a KnownJunction 1 3.11 11.05 14.58 31.40 28.44 15.16 24.82 37.79 50.23 54.50 148.46 145.85 89.44 73.34 15.70 20.08 163.16 8.83 39.62 77.98 219.25 51.99 23.73 14 E2_Ab NovelBoundary 1 3.11 2.63 14.19 28.80 9.42 9.54 20.54 22.34 35.13 38.04 134.35 79.98 32.95 52.03 14.59 29.31 165.50 6.96 35.67 65.58 148.39 44.39 10.24 15 ER2a ExonRegion 1 5.41 10.17 12.80 32.71 22.60 15.69 26.33 34.38 47.07 55.69 166.44 139.51 90.15 86.80 23.53 29.39 218.59 15.60 41.76 88.18 212.78 62.27 20.56 16 ER2b ExonRegion 0 13.71 17.18 27.28 63.02 33.70 50.12 28.62 63.52 90.15 92.80 153.93 149.01 108.95 199.21 94.08 128.54 284.46 83.11 102.79 214.54 149.42 173.65 126.03 17 E2a_E3b KnownJunction 0 5.56 30.85 51.18 75.48 47.45 69.28 18.95 79.07 100.87 73.98 91.97 161.45 192.52 163.75 116.69 226.09 189.06 167.35 92.80 195.08 76.73 161.11 211.19 18 E2a_E5a NovelJunction 0 0.00 0.00 1.83 1.83 0.00 0.00 0.00 0.00 1.10 1.24 2.00 12.60 0.00 0.00 0.00 4.36 0.00 1.66 15.34 2.81 0.00 3.12 0.00 19 ER3a ExonRegion 0 4.49 3.76 3.85 9.29 7.18 3.85 9.45 3.22 3.58 4.07 2.84 10.86 12.81 2.66 4.72 4.98 7.49 1.88 3.70 7.86 2.85 2.60 4.56 20 E3_Ab KnownBoundary 0 15.85 0.00 6.83 16.61 6.79 0.00 9.32 4.27 0.00 5.67 0.00 0.00 6.82 0.00 15.95 0.00 16.27 2.57 0.00 11.95 3.15 0.00 0.00 21 ER3b ExonRegion 0 18.14 46.63 43.40 102.29 145.90 139.50 83.91 88.36 107.65 103.06 138.81 269.15 208.58 158.82 116.81 133.98 214.07 84.14 87.37 185.96 71.16 168.27 116.23 22 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E3a_E4b KnownJunction 1 50.75 134.25 59.10 138.44 184.30 155.59 181.11 113.69 146.38 131.73 173.46 421.34 278.88 217.49 82.95 82.46 274.52 42.32 82.64 206.58 93.10 273.47 116.01 24 ER4a ExonRegion 0 1.44 5.27 3.01 5.76 9.97 8.75 9.57 5.11 6.34 6.78 7.91 27.35 13.22 10.48 7.78 5.13 13.50 3.53 4.34 9.19 5.21 12.12 5.07 25 ER4b ExonRegion 0 62.34 122.33 59.92 121.32 167.87 115.11 131.58 99.68 134.69 126.88 178.81 381.16 261.45 197.07 122.92 124.33 248.74 47.32 82.30 191.88 75.60 202.36 95.71 26 E4_Da KnownBoundary 0 3.63 3.29 14.93 3.10 3.65 5.34 8.61 5.05 0.00 1.37 2.32 36.91 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 27 E4a_E5a KnownJunction 1 115.58 139.91 57.92 150.10 186.84 59.40 98.17 114.43 132.15 124.34 124.87 529.07 150.48 180.65 121.89 135.69 213.74 61.89 81.32 207.35 76.60 194.97 109.01 28 ER4c ExonRegion 0 1.10 0.99 9.89 6.10 2.89 1.03 4.73 5.43 0.42 3.03 2.61 5.20 3.19 1.31 4.17 3.82 3.56 0.00 1.37 2.29 0.00 0.09 1.27 29 E5_Aa NovelBoundary 0 16.60 2.57 8.93 19.44 3.31 7.72 4.46 15.81 8.39 14.85 5.37 0.00 0.00 4.77 0.00 8.37 0.00 0.00 9.60 8.56 0.00 2.39 16.05 30 ER5a ExonRegion 0 82.90 122.15 69.16 149.80 129.93 88.85 101.69 130.87 139.89 155.23 167.84 441.99 262.32 275.14 118.24 161.40 235.59 72.62 102.24 192.49 81.32 286.87 125.41 31 E5_Da NovelBoundary 0 138.54 151.82 94.62 146.34 177.59 84.44 159.47 130.94 157.75 165.79 151.25 430.49 349.81 301.02 175.41 153.29 233.01 63.59 83.86 257.97 87.72 299.31 132.48 32 E5_Db NovelBoundary 0 9.11 11.84 5.03 29.13 7.56 35.66 12.72 15.12 11.20 33.85 0.00 30.91 35.22 16.78 14.09 12.22 4.49 0.00 4.80 21.16 0.00 32.45 7.43 33 E5b_E6a KnownJunction 0 9.56 0.00 1.71 20.54 11.04 5.39 10.11 3.94 4.75 9.62 0.00 11.70 0.00 4.94 0.00 4.36 3.55 3.98 3.95 3.26 3.15 0.00 4.35 34 E5b_E7a KnownJunction 0 40.30 112.35 65.11 106.11 194.65 111.07 183.32 94.18 152.86 119.29 144.67 405.73 318.00 281.30 154.40 175.94 200.19 80.34 98.07 197.12 128.74 224.36 129.07 35 ER5b ExonRegion 0 75.95 117.01 76.26 129.74 180.51 102.69 153.58 116.87 155.20 143.58 169.13 399.14 354.28 286.53 160.46 175.81 220.02 84.36 94.83 222.75 121.88 265.73 130.68 36 I5 Intron 0 7.38 28.52 5.98 27.47 19.71 15.92 16.82 10.45 13.82 20.50 3.30 31.49 31.99 11.14 4.97 6.03 6.46 2.26 4.19 19.69 2.12 19.72 6.27 37 I5_SR1 SilentIntronRegion 0 5.89 24.40 5.27 22.98 15.33 13.91 15.66 9.05 13.60 19.61 2.34 29.49 32.20 10.55 4.91 6.94 6.22 3.19 3.20 18.52 1.97 21.73 5.78 38 I5_AR2 ActiveIntronRegion 0 9.49 34.67 6.98 34.01 25.87 18.89 18.70 12.61 14.48 22.20 4.66 34.81 32.29 12.14 5.17 4.86 6.87 1.10 5.63 21.68 2.37 17.56 7.01 39 E6_Aa NovelBoundary 0 30.67 40.72 23.48 67.56 30.90 35.15 52.86 24.19 25.12 19.47 7.79 42.01 20.45 25.25 22.25 16.15 17.77 5.76 13.46 31.38 3.15 31.29 3.93 40 ER6a ExonRegion 1 25.53 16.88 4.49 37.87 22.30 17.73 20.30 6.02 10.55 12.58 7.32 33.19 4.55 13.73 7.03 17.92 8.50 7.11 8.49 15.86 11.62 7.51 7.56 41 E6_Da KnownBoundary 0 54.45 42.56 9.49 93.39 42.11 46.34 50.79 16.80 23.78 28.55 21.69 70.67 20.45 22.19 15.08 32.73 23.38 12.52 17.88 38.54 21.00 19.90 12.12 42 ER6b ExonRegion 0 34.20 35.13 8.75 58.59 30.10 27.72 25.82 9.73 16.86 30.11 8.83 29.55 15.74 18.57 12.11 23.60 13.63 8.20 13.10 23.94 14.17 13.54 23.92 43 E6_Db NovelBoundary 0 49.86 28.61 11.09 19.81 44.06 24.08 34.09 8.46 8.01 14.29 7.42 24.91 7.47 22.25 10.63 16.83 18.23 1.95 4.80 28.76 5.93 29.39 27.74 44 E6b_E7a KnownJunction 0 6.30 34.14 2.84 39.26 8.49 16.58 10.11 11.05 10.47 19.82 2.16 6.30 0.00 12.66 4.45 11.36 16.64 6.59 4.80 16.55 3.15 2.33 3.67 45 I6 Intron 0 20.60 14.84 6.75 22.93 21.35 15.17 14.56 10.53 12.72 11.64 4.14 24.19 11.16 9.69 11.98 6.07 5.78 3.77 4.96 12.22 2.57 23.12 10.58 46 I6_AR1 ActiveIntronRegion 0 24.69 17.67 8.07 27.15 25.13 17.85 17.11 12.34 15.14 13.65 4.87 27.07 12.35 10.98 13.46 6.93 6.97 4.41 5.58 14.58 3.10 27.42 12.65 47 E7_Aa NovelBoundary 0 29.26 9.47 1.83 14.52 57.98 14.37 26.32 6.12 15.45 6.66 0.00 37.66 13.15 7.18 0.00 15.64 8.60 7.25 14.40 22.43 6.05 8.88 11.95 48 ER7a ExonRegion 0 107.03 180.86 99.94 168.22 210.03 96.25 105.10 146.83 119.15 174.89 77.27 281.28 201.84 163.35 158.55 104.47 111.33 47.74 66.10 134.73 53.52 211.53 73.13 49 ER7b ExonRegion 0 7.76 12.88 0.82 4.09 0.00 0.00 0.44 0.00 1.24 6.12 3.87 12.99 6.25 9.20 10.64 2.97 4.40 0.00 1.06 3.55 0.00 1.39 1.96