Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-38J22.2 Gene 0 8.50 0.11 0.00 0.11 6.93 0.68 1.61 0.95 1.85 0.09 38.31 132.00 13.17 32.56 76.91 29.22 2.97 0.00 0.17 0.22 0.00 0.33 0.00 2 455672 Transcript 1 8.08 0.09 0.00 0.09 4.97 0.25 0.73 1.16 0.17 0.00 0.18 50.32 5.60 17.92 22.10 9.17 2.07 0.00 0.00 0.10 0.00 0.00 0.00 3 436158 Transcript 0 2.55 0.00 0.00 0.00 2.59 0.00 0.20 0.39 0.28 0.00 11.71 25.33 1.68 7.02 18.06 10.40 0.46 0.00 0.00 0.00 0.00 0.00 0.00 4 417522 Transcript 0 2.15 0.00 0.00 0.00 1.78 0.00 0.78 0.00 2.27 0.00 104.19 114.49 8.34 27.89 67.14 27.27 0.10 0.00 0.20 0.00 0.00 0.83 0.00 5 ER1a ExonRegion 0 21.41 0.00 0.00 0.00 11.96 0.00 0.55 0.00 0.00 0.00 0.00 5.09 0.00 48.82 43.01 22.20 4.85 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 43.11 0.00 0.00 0.00 24.08 0.00 2.24 0.00 0.00 0.00 0.00 12.89 0.00 131.31 196.02 58.41 5.53 0.00 0.00 0.00 0.00 0.00 0.00 7 E1_Da NovelBoundary 1 74.98 0.00 0.00 1.76 21.99 4.66 0.00 0.00 7.58 0.00 0.00 6.30 0.00 0.00 49.08 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E2a KnownJunction 0 19.63 0.00 0.00 0.00 20.71 0.00 2.12 0.00 0.00 0.00 0.00 6.30 0.00 56.21 78.62 60.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E4b NovelJunction 0 3.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.65 0.00 7.06 10.88 0.00 7.67 0.00 0.00 0.00 0.00 0.00 0.00 10 I1 Intron 1 20.30 0.03 0.05 0.80 6.46 0.61 0.74 1.60 4.65 0.07 0.12 51.88 5.22 2.38 45.24 7.97 0.59 0.16 1.30 0.27 0.00 0.00 0.00 11 I1_SR1 SilentIntronRegion 1 20.58 0.04 0.08 0.84 6.07 0.60 0.40 1.52 6.50 0.11 0.08 56.37 5.58 2.25 46.30 8.51 0.36 0.12 1.87 0.32 0.00 0.00 0.00 12 I1_AR1 ActiveIntronRegion 1 27.58 0.00 0.00 0.74 5.15 0.53 1.35 2.97 3.28 0.00 0.42 34.30 5.13 2.20 51.98 6.18 0.48 0.00 0.23 0.31 0.00 0.00 0.00 13 I1_SR2 SilentIntronRegion 1 19.05 0.00 0.00 0.00 8.03 0.00 0.00 1.73 1.24 0.00 0.00 16.53 0.00 3.25 53.54 11.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 I1_AR2 ActiveIntronRegion 1 17.73 0.00 0.00 0.00 7.69 0.00 0.00 0.65 1.24 0.00 0.00 11.91 0.00 3.25 51.86 11.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I1_SR3 SilentIntronRegion 1 14.36 0.00 0.00 0.76 8.39 0.69 1.14 0.83 1.21 0.00 0.00 54.87 4.54 2.83 37.54 7.87 1.24 0.40 0.69 0.11 0.00 0.00 0.00 16 E2_Aa NovelBoundary 0 6.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.86 0.00 0.00 60.47 6.49 2.47 9.89 14.27 4.39 0.00 4.61 0.00 0.00 0.00 0.00 17 ER2a ExonRegion 1 6.86 0.00 0.00 0.00 14.30 1.66 1.39 0.34 1.66 0.00 0.00 74.48 13.53 15.08 70.71 24.80 1.34 0.00 0.00 0.00 0.00 0.00 0.00 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2a_E4b NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63.02 6.17 12.60 13.35 3.85 9.54 0.00 0.00 0.00 0.00 0.00 0.00 20 E2b_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER2b ExonRegion 0 2.12 0.00 0.00 0.00 5.35 0.00 0.00 0.00 0.00 0.00 2.42 18.76 1.56 1.35 6.77 5.70 1.38 0.00 0.00 0.00 0.00 0.00 0.00 22 I2 Intron 1 2.56 0.00 0.00 0.00 0.88 0.00 0.29 1.13 3.64 0.38 0.42 23.15 3.91 3.15 32.17 2.29 0.73 0.00 0.35 0.00 0.00 0.00 0.00 23 I2_SR1 SilentIntronRegion 1 2.56 0.00 0.00 0.00 0.88 0.00 0.29 1.13 3.65 0.38 0.43 23.20 3.92 3.15 32.23 2.29 0.73 0.00 0.35 0.00 0.00 0.00 0.00 24 E3_Aa NovelBoundary 1 8.74 0.00 0.00 0.00 3.14 0.00 1.77 0.00 1.79 0.00 0.00 291.24 13.64 2.47 19.66 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER3a ExonRegion 1 2.83 0.28 0.00 0.28 2.93 0.75 1.63 1.31 0.50 0.00 0.53 145.85 16.79 4.93 23.29 5.30 1.36 0.00 0.00 0.29 0.00 0.00 0.00 26 E3_Da NovelBoundary 1 0.00 0.00 0.00 4.46 0.00 0.00 2.25 0.00 1.50 0.00 0.00 120.04 34.25 0.00 4.45 3.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 I3 Intron 1 3.20 0.00 0.00 0.58 1.45 0.18 0.30 0.37 1.23 0.05 3.45 72.26 6.42 7.55 20.50 8.95 1.26 0.00 0.71 0.20 0.00 0.07 0.00 28 I3_SR1 SilentIntronRegion 0 3.20 0.00 0.00 0.58 1.45 0.18 0.30 0.37 1.23 0.05 3.45 72.28 6.42 7.56 20.50 8.95 1.26 0.00 0.71 0.20 0.00 0.07 0.00 29 E4_Aa NovelBoundary 0 10.59 0.00 0.00 0.00 17.32 0.00 0.00 2.22 2.81 0.00 78.86 246.38 19.64 80.41 164.04 77.84 0.00 1.87 0.00 3.13 0.00 0.00 0.00 30 ER4a ExonRegion 0 2.15 0.00 0.00 0.00 1.78 0.00 0.78 0.00 2.27 0.00 104.19 114.49 8.34 27.89 67.14 27.27 0.10 0.00 0.20 0.00 0.00 0.83 0.00 31 E4_Ab KnownBoundary 0 10.37 0.00 0.00 0.00 8.49 0.00 2.03 0.00 4.54 0.00 152.46 193.41 6.82 63.57 141.29 39.14 0.00 0.00 0.00 0.00 0.00 3.12 0.00 32 ER4b ExonRegion 0 18.23 0.00 0.00 0.00 13.00 1.26 3.78 1.20 6.96 0.59 150.82 291.36 23.83 101.38 220.26 93.46 11.31 0.00 1.01 0.73 0.00 1.14 0.00 33 E4_Da NovelBoundary 1 14.82 0.00 0.00 2.06 0.00 0.00 2.25 0.00 1.39 0.00 18.00 94.53 0.00 7.36 68.73 7.09 0.00 1.74 0.00 0.00 0.00 0.00 0.00 34 E4a_E5a KnownJunction 0 7.56 0.00 0.00 0.00 15.79 0.00 0.00 2.38 1.79 0.00 113.77 180.06 39.28 62.28 129.92 52.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E5_Aa NovelBoundary 0 12.89 5.26 10.08 9.52 3.90 0.00 12.94 12.24 16.61 11.63 113.29 269.49 99.67 181.94 196.68 77.76 111.73 25.12 4.42 14.25 2.47 0.00 7.60 36 ER5a ExonRegion 0 6.72 0.00 0.00 0.00 3.63 0.00 0.00 1.05 1.74 0.00 51.35 86.43 5.73 24.78 68.52 22.90 2.12 0.00 0.00 0.00 0.00 1.21 0.00 37 E5_Da KnownBoundary 0 21.86 0.00 5.03 1.93 8.40 0.00 0.00 4.76 5.87 4.54 212.53 193.56 34.58 224.03 463.81 103.31 110.71 12.02 0.00 0.00 0.00 0.00 0.00 38 ER5b ExonRegion 0 5.54 0.00 0.00 0.00 2.42 0.00 0.60 1.16 0.83 0.00 32.71 57.24 3.49 19.71 47.40 25.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00