Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM72A Gene 0 6.63 5.33 4.76 3.18 3.85 2.84 6.37 4.16 2.03 7.95 10.63 17.62 6.90 15.03 8.08 7.13 8.60 2.63 2.24 9.42 1.06 1.40 0.28 2 470041 Transcript 0 0.84 0.00 0.29 0.00 0.00 0.00 0.08 0.05 0.78 0.01 0.00 0.03 0.00 0.00 0.32 0.00 0.16 0.00 0.00 0.00 1.03 0.33 0.00 3 468509 Transcript 0 0.66 0.00 1.04 0.00 0.12 0.25 0.00 1.16 0.91 0.22 0.17 0.16 0.00 0.81 0.92 1.48 0.00 0.25 0.00 0.37 1.76 0.56 0.26 4 367129 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 367128 Transcript 0 0.47 0.45 0.80 0.45 0.59 0.68 1.41 0.00 0.00 0.38 0.00 3.94 0.00 0.65 0.45 0.00 0.00 2.92 0.00 0.52 0.00 0.00 0.00 6 481737 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 431655 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 341209 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1a ExonRegion 0 1.68 0.00 0.57 0.00 0.00 0.00 0.15 0.10 1.55 0.02 0.00 0.05 0.00 0.00 0.64 0.00 0.32 0.00 0.00 0.00 2.07 0.65 0.00 10 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2_Ab NovelBoundary 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 2.32 0.00 0.00 0.00 5.93 0.00 0.00 0.00 0.00 2.88 8.83 3.00 0.00 12 ER2a ExonRegion 0 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2b ExonRegion 0 0.49 0.00 1.27 0.00 0.00 0.85 0.00 3.52 0.85 0.07 1.80 0.82 0.00 0.00 0.95 1.30 0.00 0.64 0.00 0.54 1.42 0.48 0.00 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3a ExonRegion 0 1.99 0.00 2.13 0.00 0.36 0.74 0.00 3.12 2.72 0.65 0.52 0.48 0.00 2.44 2.76 4.44 0.00 0.74 0.00 1.12 5.27 1.68 0.79 17 E3_Da NovelBoundary 0 0.00 0.00 3.43 0.00 0.00 0.00 2.25 2.46 2.43 1.58 0.00 0.00 0.00 7.59 0.00 0.00 4.58 0.00 0.00 0.00 17.54 0.00 3.59 18 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 19 E4_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 21 ER4c ExonRegion 0 0.99 0.00 0.00 0.23 1.11 0.00 0.00 0.14 0.14 0.44 0.02 0.00 0.00 0.00 0.48 0.00 0.02 2.10 0.00 0.22 0.00 0.00 0.00 22 E4_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 2.38 2.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.11 0.00 0.00 0.49 0.00 0.00 0.00 0.00 0.00 24 E4_Db KnownBoundary 0 0.00 0.00 2.84 0.00 12.39 12.89 16.52 0.00 0.00 2.61 11.69 5.25 7.95 0.00 5.56 8.54 0.00 20.19 0.00 2.81 0.00 0.00 0.00 25 E4b_E4e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER4e ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.81 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.00 0.00 1.55 0.00 0.00 0.00 27 E4_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER4f ExonRegion 0 3.67 3.97 8.00 3.96 1.55 0.82 3.40 4.16 1.53 10.01 8.53 2.64 0.00 6.05 1.41 1.98 13.80 4.06 0.92 8.47 0.00 1.75 0.00 29 E4_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E4_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E4c_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER4g ExonRegion 0 4.23 4.99 3.90 10.41 13.14 3.67 19.98 5.19 1.57 15.54 15.11 9.45 0.00 12.70 5.80 5.94 21.01 1.18 5.79 3.87 0.00 4.17 0.00 33 ER4h ExonRegion 0 0.60 3.54 4.90 2.99 8.05 2.39 4.87 5.35 1.55 4.22 5.49 6.56 3.75 20.31 12.16 15.26 4.34 2.01 2.79 5.94 0.00 0.30 0.00 34 E4d_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER4i ExonRegion 0 0.56 0.00 14.05 5.45 4.99 0.00 0.00 8.99 5.35 7.19 31.44 28.86 0.00 28.80 4.26 15.46 18.71 5.91 9.56 22.55 0.00 0.00 0.00 36 ER5a ExonRegion 0 10.80 0.81 7.12 4.77 1.72 0.00 0.54 11.92 7.20 17.62 25.03 34.19 0.00 30.77 14.69 7.20 14.43 6.89 0.86 23.27 1.13 0.00 0.00 37 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER6a ExonRegion 0 24.14 21.05 7.15 5.56 14.10 8.33 13.49 14.95 5.37 23.40 47.59 5.62 6.34 23.35 10.90 15.99 45.32 9.44 3.27 28.46 2.32 1.18 1.27 39 E6_Da KnownBoundary 0 70.75 65.65 37.11 21.58 62.65 33.84 100.47 14.66 8.39 72.55 108.45 50.27 32.95 88.70 41.16 62.12 129.50 23.46 12.80 79.51 3.15 8.70 4.01 40 ER6b ExonRegion 0 25.88 25.10 14.96 11.01 14.23 8.34 29.04 17.64 8.41 30.24 57.77 45.56 20.31 63.16 30.63 32.39 36.50 9.78 14.70 40.16 1.88 4.45 1.17 41 E6b_E7a KnownJunction 0 27.12 23.88 5.50 9.19 39.81 11.07 21.60 15.40 4.08 32.02 58.12 83.58 28.73 79.40 49.57 28.80 31.04 13.80 8.94 57.46 3.15 0.00 0.00 42 ER7a ExonRegion 0 25.79 11.81 9.35 8.88 22.67 5.54 20.37 9.91 5.70 28.43 41.71 66.52 24.11 54.89 22.02 26.24 28.93 9.38 7.12 30.31 1.73 3.09 0.57 43 E7_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER7b ExonRegion 0 1.88 2.74 11.49 10.04 1.19 3.60 5.91 8.30 2.18 28.18 29.09 101.84 34.67 78.27 28.46 33.83 20.49 6.12 13.24 23.90 0.06 7.25 0.84 45 E7_Db KnownBoundary 0 16.67 66.70 39.71 15.55 12.48 24.76 48.45 8.79 9.95 45.88 47.12 132.49 22.73 60.16 24.72 35.38 16.83 6.22 13.74 28.63 0.00 6.06 0.00 46 ER7c ExonRegion 0 9.01 26.39 10.54 10.59 9.21 14.24 27.19 7.96 2.67 23.36 38.39 74.51 18.11 31.01 8.57 19.35 27.17 3.74 7.56 30.63 2.20 1.99 0.00 47 E7_Dc KnownBoundary 0 66.97 106.03 53.28 34.36 44.82 26.86 99.81 27.03 6.22 53.05 86.02 178.71 63.31 58.16 42.28 29.65 75.64 8.62 18.17 54.20 0.00 7.90 0.00 48 ER7d ExonRegion 0 12.63 10.53 5.43 4.33 6.31 5.76 12.33 3.93 1.89 9.21 12.30 28.31 14.53 19.89 14.02 7.88 9.34 1.50 2.59 13.07 0.14 1.29 0.35 49 E7_Dd KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER7e ExonRegion 0 1.40 1.35 2.40 1.35 1.77 1.21 2.63 0.00 0.00 1.13 0.00 11.81 0.00 1.96 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00