Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	LRRN2	Gene	0	19.88	34.14	53.57	31.65	8.70	1.43	19.79	50.36	25.00	23.55	0.87	2.73	3.86	5.22	2.78	3.15	1.13	30.80	114.59	75.73	0.93	1.74	2.11
2	367177	Transcript	0	1.65	5.99	5.69	9.19	0.00	0.00	2.59	10.33	5.38	3.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.57	44.35	27.17	0.00	0.00	0.05
3	496057	Transcript	0	0.01	2.89	5.49	4.25	0.00	0.00	1.52	3.56	1.39	2.11	0.00	2.44	0.00	0.00	0.00	0.00	0.00	2.75	23.77	18.90	0.00	0.00	0.00
4	367176	Transcript	0	0.84	1.89	4.37	1.35	0.00	0.00	2.63	3.06	0.51	0.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.69	5.08	10.69	0.00	0.00	0.00
5	367175	Transcript	0	25.41	14.31	12.65	13.35	9.02	2.59	14.03	16.48	7.97	9.31	1.70	4.64	8.21	7.10	5.62	5.40	2.46	12.94	21.26	36.52	2.22	2.89	4.35
6	ER1a	ExonRegion	0	0.27	0.93	3.49	2.43	0.00	0.00	1.60	6.49	0.26	2.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.24	52.65	18.87	0.00	0.00	0.10
7	E1_Ab	KnownBoundary	0	0.00	3.35	5.47	3.63	0.00	0.00	8.08	4.60	1.56	3.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	19.48	34.64	24.03	0.00	0.00	0.00
8	E1_Ac	KnownBoundary	0	0.00	0.00	1.83	12.89	0.00	0.00	3.97	1.85	3.27	4.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.91	46.40	26.59	0.00	0.00	4.35
9	ER1b	ExonRegion	0	0.65	4.07	5.37	10.80	0.00	0.00	7.33	5.98	0.00	3.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	11.66	38.71	24.39	0.00	0.00	2.94
10	ER1c	ExonRegion	0	0.00	4.87	9.32	14.74	0.00	0.00	4.69	7.18	3.86	4.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.38	44.50	28.50	0.00	0.00	2.22
11	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E3a	KnownJunction	0	0.00	2.96	2.60	0.00	0.00	0.00	0.00	1.85	1.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.04	6.14	0.00	0.00	0.00
13	E1a_E4b	KnownJunction	0	3.04	11.05	7.89	15.95	0.00	0.00	3.58	14.17	10.50	5.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.89	36.05	35.47	0.00	0.00	0.00
14	I1	Intron	0	1.39	1.96	4.77	2.29	0.19	0.00	4.92	3.03	1.26	1.21	0.00	0.17	0.00	0.00	0.00	0.00	0.00	3.72	19.27	33.95	0.00	0.00	0.00
15	I1_AR1	ActiveIntronRegion	0	1.33	1.99	5.95	1.85	0.00	0.00	5.98	3.68	1.59	1.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.84	19.72	39.75	0.00	0.00	0.00
16	I1_AR2	ActiveIntronRegion	0	3.41	5.96	7.95	4.09	2.04	0.00	12.61	2.02	0.00	2.69	0.00	2.53	0.00	0.00	0.00	0.00	0.00	5.13	30.13	43.35	0.00	0.00	0.00
17	I1_AR3	ActiveIntronRegion	0	0.00	0.00	9.14	4.51	5.35	0.00	7.94	6.12	0.86	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.23	18.87	51.88	0.00	0.00	0.00
18	I1_AR4	ActiveIntronRegion	0	0.13	0.00	11.79	7.33	2.68	0.00	5.96	7.45	1.24	0.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.70	27.08	71.01	0.00	0.00	0.00
19	I1_AR5	ActiveIntronRegion	0	3.63	2.03	9.98	8.18	0.00	0.00	12.29	8.64	1.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	13.73	72.35	88.45	0.00	0.00	0.00
20	I1_AR6	ActiveIntronRegion	0	4.23	3.29	11.69	8.18	0.00	0.00	16.80	9.57	2.47	0.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.07	82.57	89.69	0.00	0.00	0.00
21	I1_AR7	ActiveIntronRegion	0	6.35	7.84	13.30	8.18	0.00	0.00	17.21	8.89	3.18	1.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.78	91.47	91.19	0.00	0.00	0.00
22	I1_SR2	SilentIntronRegion	0	3.05	4.35	8.50	4.74	0.27	0.00	7.37	5.51	2.34	1.83	0.00	0.36	0.00	0.00	0.00	0.00	0.00	4.98	29.31	60.22	0.00	0.00	0.00
23	E2_Aa	NovelBoundary	0	3.11	20.65	13.39	2.70	4.24	0.00	23.89	9.24	4.14	7.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	13.68	9.04	50.81	0.00	0.00	0.00
24	ER2a	ExonRegion	0	2.53	5.67	13.10	4.05	0.00	0.00	7.88	9.17	1.54	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.08	15.23	32.08	0.00	0.00	0.00
25	E2_Da	NovelBoundary	0	0.00	13.42	14.25	6.56	0.00	0.00	6.23	9.45	1.48	3.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.84	44.99	77.66	0.00	0.00	0.00
26	E2a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	I2	Intron	0	2.90	7.70	7.26	4.79	1.30	0.01	10.63	10.28	3.65	3.62	0.00	0.68	0.06	0.03	0.07	0.00	0.00	4.82	22.25	48.05	0.00	0.00	0.00
28	I2_SR1	SilentIntronRegion	0	2.75	7.55	7.90	4.36	0.97	0.00	12.32	7.97	3.07	3.50	0.00	0.63	0.14	0.02	0.05	0.00	0.00	4.44	23.72	48.50	0.00	0.00	0.00
29	I2_AR1	ActiveIntronRegion	0	3.49	9.05	3.33	4.91	0.00	0.00	10.34	15.15	2.52	3.35	0.00	2.00	0.00	0.43	0.00	0.00	0.00	4.41	22.50	60.29	0.00	0.00	0.00
30	I2_AR2	ActiveIntronRegion	0	2.02	5.72	4.26	2.95	2.03	0.00	8.60	15.41	1.97	4.65	0.00	0.96	0.00	0.34	0.00	0.00	0.00	1.96	22.41	78.10	0.00	0.00	0.00
31	I2_SR2	SilentIntronRegion	0	3.03	7.86	7.00	5.20	1.58	0.02	9.41	11.72	4.19	3.68	0.00	0.67	0.00	0.01	0.09	0.00	0.00	5.23	21.10	46.19	0.00	0.00	0.00
32	Ix	Intron	0	0.73	4.89	4.39	3.14	0.92	0.00	7.28	7.52	5.06	3.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.57	19.14	32.15	0.00	0.00	0.00
33	Ix_SR1	SilentIntronRegion	0	0.73	4.92	4.42	3.16	0.93	0.00	7.32	7.57	5.09	3.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.60	19.27	32.36	0.00	0.00	0.00
34	I2	Intron	0	1.95	9.03	7.52	4.92	0.89	0.01	7.72	7.06	3.04	2.40	0.00	0.29	0.04	0.02	0.02	0.05	0.00	5.88	19.69	40.88	0.00	0.01	0.04
35	I2_SR1	SilentIntronRegion	0	0.80	10.16	8.96	5.64	0.86	0.00	10.25	10.31	4.95	2.80	0.00	0.00	0.11	0.09	0.00	0.00	0.00	7.84	22.05	57.92	0.00	0.00	0.00
36	I2_AR1	ActiveIntronRegion	0	4.19	17.79	11.63	9.14	1.07	0.00	9.85	6.89	3.12	2.35	0.00	0.00	0.97	0.11	0.00	0.00	0.00	5.90	21.62	50.63	0.00	0.00	0.00
37	I2_SR2	SilentIntronRegion	0	5.67	18.74	11.30	8.75	2.84	0.00	11.98	4.35	3.73	2.64	0.00	0.00	0.00	0.11	0.00	0.00	0.00	6.66	24.20	43.47	0.00	0.00	0.00
38	I2_AR2	ActiveIntronRegion	0	4.38	6.67	4.79	3.68	0.00	0.00	3.79	2.63	1.21	0.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.07	32.06	0.00	0.00	0.00
39	I2_AR3	ActiveIntronRegion	0	8.61	22.96	11.30	8.55	1.81	0.00	12.73	11.78	3.86	4.28	0.00	1.21	0.00	0.00	0.00	0.00	0.00	5.88	27.09	58.42	0.00	0.00	0.00
40	I2_SR4	SilentIntronRegion	0	1.80	8.15	7.08	4.56	0.85	0.01	7.17	6.62	2.77	2.31	0.00	0.32	0.00	0.01	0.02	0.06	0.00	5.66	19.14	38.00	0.00	0.02	0.04
41	E3_Aa	NovelBoundary	0	26.67	58.34	76.46	108.64	48.39	57.13	84.97	137.68	108.19	71.75	18.64	5.25	26.62	0.00	5.44	30.76	37.40	57.08	77.84	77.98	54.30	26.33	18.35
42	ER3a	ExonRegion	0	0.04	2.61	9.41	9.34	0.00	0.00	4.56	8.84	1.92	3.07	0.00	1.01	0.00	0.00	0.00	0.00	0.00	1.83	27.74	31.98	0.00	0.00	0.00
43	E3a_E4b	KnownJunction	0	0.00	3.09	4.46	3.40	0.00	0.00	0.00	0.00	1.19	3.25	0.00	6.30	0.00	0.00	0.00	0.00	0.00	6.43	34.54	18.60	0.00	0.00	0.00
44	I3	Intron	0	2.33	7.67	5.73	4.68	1.96	0.00	6.72	7.57	3.32	2.62	0.00	0.12	0.00	0.04	0.00	0.00	0.00	6.53	16.16	33.73	0.00	0.00	0.00
45	I3_SR1	SilentIntronRegion	0	2.33	7.67	5.73	4.68	1.96	0.00	6.72	7.57	3.32	2.62	0.00	0.12	0.00	0.04	0.00	0.00	0.00	6.53	16.16	33.73	0.00	0.00	0.00
46	Ix	Intron	0	3.61	5.56	9.36	1.39	0.30	0.00	3.62	4.70	1.68	3.70	0.00	0.81	0.00	0.15	0.33	0.34	0.00	6.79	14.14	22.04	0.00	0.00	0.00
47	Ix_SR1	SilentIntronRegion	0	3.63	5.58	9.40	1.39	0.31	0.00	3.63	4.71	1.68	3.71	0.00	0.82	0.00	0.15	0.33	0.34	0.00	6.82	14.21	22.14	0.00	0.00	0.00
48	Ix_AR3	ActiveIntronRegion	0	8.60	8.22	7.70	3.45	4.89	0.34	6.05	8.80	3.08	5.55	0.00	1.78	2.37	3.17	1.02	1.68	0.10	4.48	19.05	35.83	0.00	0.38	0.00
49	Ix_AR1	ActiveIntronRegion	0	28.87	9.87	6.32	8.68	6.55	1.70	9.34	13.24	4.61	7.78	1.02	2.74	4.26	4.21	3.43	4.07	1.84	12.50	32.30	35.20	0.00	2.20	0.00
50	Ix_SR1	SilentIntronRegion	0	17.96	10.89	12.05	10.54	4.17	0.59	6.29	12.65	6.05	7.90	0.77	3.41	0.92	4.75	4.67	2.95	0.00	6.81	21.83	39.51	1.06	0.67	1.17
51	E4_Aa	NovelBoundary	0	13.78	22.56	10.14	21.61	3.74	0.00	8.83	15.57	7.99	7.90	2.42	0.00	7.47	0.00	9.64	3.85	0.00	13.02	17.69	55.54	0.00	0.00	0.00
52	ER4a	ExonRegion	0	25.41	14.31	12.65	13.35	9.02	2.59	14.03	16.48	7.97	9.31	1.70	4.64	8.21	7.10	5.62	5.40	2.46	12.94	21.26	36.52	2.22	2.89	4.35
53	E4_Ab	KnownBoundary	0	10.74	25.19	29.36	24.61	3.57	0.00	16.25	28.51	6.05	15.28	2.16	6.30	0.00	10.71	0.00	3.42	0.00	21.14	34.35	55.16	0.00	0.00	7.68
54	ER4b	ExonRegion	0	15.96	35.91	56.96	42.73	7.55	0.88	19.73	60.56	35.48	36.66	0.55	2.76	1.24	6.52	1.47	2.90	0.42	50.21	171.66	107.45	0.00	0.33	2.08
55	E4_Da	KnownBoundary	0	21.71	65.45	52.98	47.35	8.06	0.00	37.49	55.12	54.95	50.26	0.00	0.00	0.00	2.47	0.00	7.52	3.93	60.94	203.30	92.87	0.00	0.00	0.00
56	ER4c	ExonRegion	0	20.84	55.87	94.06	50.06	10.65	0.99	27.82	83.99	41.86	37.34	0.51	1.94	1.90	4.94	1.52	2.28	0.51	47.28	193.39	112.78	0.33	1.48	0.93