Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KLHDC8A Gene 0 4.57 16.77 82.14 11.13 30.56 16.53 10.71 60.47 37.66 13.05 0.00 0.00 0.06 0.00 0.00 0.00 0.00 38.07 10.16 15.70 0.22 0.75 0.51 2 367156 Transcript 0 0.00 0.13 2.68 0.00 2.78 0.83 0.08 0.96 0.58 0.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.88 0.30 0.53 0.00 0.07 0.00 3 367155 Transcript 0 0.00 0.15 3.58 0.00 2.43 0.30 0.00 3.24 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.32 0.00 0.00 0.00 0.00 0.00 4 491471 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 460687 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.30 1.98 0.00 0.87 0.59 0.00 0.56 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.01 0.00 0.00 0.00 0.00 0.00 9 E2_Ab KnownBoundary 0 0.00 0.00 14.16 0.00 3.48 2.33 0.00 1.68 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.11 0.00 0.00 0.00 0.00 0.00 10 ER2b ExonRegion 0 0.36 0.66 6.02 0.00 0.66 0.49 0.23 3.41 3.17 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.14 0.00 0.00 0.00 1.42 0.00 11 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 4.16 2.44 0.00 0.00 4.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E2_Ad KnownBoundary 0 2.82 0.00 1.39 0.00 4.24 0.00 0.00 7.11 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2c ExonRegion 0 0.00 0.00 1.36 0.00 2.97 1.83 0.00 5.19 3.29 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2d ExonRegion 0 0.00 0.06 3.95 0.00 3.34 0.10 0.00 5.95 1.17 1.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 0.00 0.00 0.00 0.00 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 16 E2a_E5a KnownJunction 0 0.00 0.00 5.17 0.00 3.99 0.00 0.00 5.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.63 0.00 0.00 0.00 0.00 0.00 17 I2 Intron 0 0.20 2.40 3.65 0.34 2.45 0.49 0.03 5.14 8.06 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.58 0.08 0.00 0.05 0.05 0.21 18 I2_SR1 SilentIntronRegion 0 0.20 2.40 3.65 0.34 2.45 0.49 0.03 5.15 8.06 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.59 0.08 0.00 0.05 0.05 0.21 19 E3_Aa NovelBoundary 0 3.63 16.77 5.68 0.00 4.33 0.00 0.00 5.79 12.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.83 0.00 0.00 0.00 0.00 0.00 20 ER3a ExonRegion 0 1.00 3.85 2.22 0.00 2.54 0.00 0.63 6.11 8.73 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.52 0.00 0.00 0.52 0.00 0.00 21 E3_Da NovelBoundary 0 6.52 20.39 16.71 0.00 11.04 0.00 0.00 20.45 19.39 3.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.46 0.00 0.00 0.00 0.00 0.00 22 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 I3 Intron 0 1.44 4.34 6.55 0.54 6.60 2.42 0.29 11.46 11.67 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.07 15.50 0.28 0.42 0.10 0.05 0.00 26 I3_AR1 ActiveIntronRegion 0 1.07 3.68 8.60 0.91 5.72 3.51 0.13 13.21 15.04 2.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.07 0.64 0.49 0.00 0.00 0.00 27 I3_SR2 SilentIntronRegion 0 1.13 3.28 7.92 0.83 2.72 6.35 0.00 11.08 9.31 1.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.25 0.85 2.67 0.00 0.00 0.00 28 E4_Aa NovelBoundary 0 3.48 0.00 9.17 0.00 3.74 0.00 0.00 7.97 5.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.62 0.00 7.86 0.00 0.00 0.00 29 ER4a ExonRegion 0 0.00 0.64 4.87 0.00 3.98 1.52 0.42 3.14 2.89 0.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.26 1.50 2.67 0.00 0.33 0.00 30 E4a_E5a KnownJunction 0 0.00 0.00 8.54 0.00 7.47 2.61 0.00 1.64 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.16 0.00 0.00 0.00 0.00 0.00 31 ER5a ExonRegion 0 1.33 2.82 25.95 1.30 3.82 4.08 2.66 13.27 13.36 5.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.55 3.30 7.56 0.00 0.27 0.39 32 E5_Da KnownBoundary 0 2.96 3.29 45.21 11.12 0.00 11.07 4.11 25.67 14.00 10.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.11 9.60 10.87 0.00 0.00 0.00 33 ER5b ExonRegion 0 2.51 6.53 57.90 7.14 12.75 16.92 6.70 34.90 21.73 11.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.29 10.92 16.76 0.00 0.00 0.59 34 E5b_E6a KnownJunction 0 2.82 0.00 81.31 11.35 11.71 10.39 5.39 71.72 34.23 14.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.07 13.46 29.47 0.00 0.00 3.93 35 ER6a ExonRegion 0 2.00 12.62 94.37 11.21 18.54 17.97 6.10 73.80 42.99 14.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.89 14.59 16.48 0.00 0.00 0.27 36 E6_Da NovelBoundary 0 0.00 0.00 11.56 7.66 0.00 2.90 5.30 17.70 7.15 6.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.03 22.49 9.01 0.00 0.00 0.00 37 E6a_E7a KnownJunction 0 0.00 21.97 101.39 13.25 15.79 25.44 6.54 69.95 46.41 25.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63.30 8.47 24.10 0.00 0.00 0.00 38 I6 Intron 0 0.46 1.33 11.14 4.87 4.08 3.60 0.87 16.28 8.02 5.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.61 2.78 3.25 0.00 0.00 0.00 39 I6_SR1 SilentIntronRegion 0 0.48 1.39 11.57 4.98 4.26 3.76 0.90 16.90 8.35 5.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.01 2.90 3.33 0.00 0.00 0.00 40 E7_Aa NovelBoundary 0 3.56 3.22 11.24 4.69 3.65 0.00 2.12 18.65 10.39 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 0.00 0.00 0.00 0.00 0.00 41 ER7a ExonRegion 0 2.90 10.34 118.15 10.51 29.57 28.72 13.37 94.90 55.13 21.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.26 16.24 20.77 0.00 0.89 0.00 42 E7a_E8a KnownJunction 0 10.45 11.58 137.93 9.16 42.19 19.36 16.34 102.44 62.73 26.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.54 21.18 26.14 0.00 2.51 0.00 43 ER8a ExonRegion 0 3.86 10.55 81.19 7.42 39.19 18.79 14.46 53.65 41.22 17.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.35 8.99 12.39 0.00 0.20 0.00 44 E8a_E9a KnownJunction 0 14.00 20.85 84.27 9.86 31.49 33.05 16.47 81.12 65.57 19.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.69 8.66 3.26 0.00 0.00 0.00 45 ER9a ExonRegion 0 9.33 26.97 149.89 21.28 47.42 31.20 22.40 110.61 66.76 27.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69.62 16.20 27.39 0.81 0.97 2.64 46 E9_Da KnownBoundary 0 11.34 14.73 211.70 23.27 41.51 26.52 25.92 169.43 89.09 24.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 100.52 16.85 35.22 0.00 3.12 8.45 47 ER9b ExonRegion 0 8.87 34.85 141.94 21.74 61.18 27.10 19.23 105.42 63.69 20.35 0.00 0.00 0.16 0.00 0.00 0.00 0.00 49.42 16.92 26.47 0.37 1.26 0.62