Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CYB5R1 Gene 0 42.83 29.06 42.80 58.16 35.87 61.03 32.35 48.12 59.35 34.25 16.46 14.81 14.00 27.63 39.91 30.86 25.71 33.86 34.59 34.36 43.78 51.43 58.09 2 367249 Transcript 0 4.38 3.49 1.05 0.97 1.91 6.81 1.23 2.35 1.94 1.47 2.21 0.31 1.01 2.20 0.00 2.76 0.24 0.00 0.00 3.50 1.26 0.60 0.63 3 473599 Transcript 0 0.00 0.00 0.00 3.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 482572 Transcript 0 5.93 3.29 13.04 1.70 0.00 2.61 0.00 7.11 7.00 3.57 0.00 0.00 0.00 0.00 5.69 0.00 3.46 11.11 14.12 2.68 0.00 0.00 0.00 5 478009 Transcript 0 7.86 3.49 0.00 0.51 0.23 2.89 2.52 0.63 0.01 0.04 0.24 0.53 0.00 0.16 0.15 0.96 0.00 0.28 0.00 0.37 0.00 0.14 0.78 6 446185 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 497655 Transcript 0 19.32 7.99 14.44 16.68 12.51 19.88 10.53 15.88 9.70 11.14 5.78 6.14 8.65 7.64 6.09 8.97 7.43 10.04 10.52 12.92 6.89 7.83 7.17 8 483915 Transcript 0 11.54 4.49 7.88 9.06 5.43 6.88 4.41 2.67 2.49 2.81 1.71 0.14 2.85 1.13 3.39 3.03 4.50 3.44 2.24 3.26 1.77 5.64 3.12 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E1_Ac KnownBoundary 0 10.89 10.06 0.00 0.00 8.40 28.05 2.25 0.00 1.59 1.67 5.26 0.00 0.00 0.00 8.78 12.05 9.35 0.00 0.00 0.00 9.02 12.00 19.97 11 ER1b ExonRegion 0 5.03 7.05 4.14 5.88 4.43 11.35 2.15 1.78 3.63 4.70 3.20 0.00 0.00 1.02 5.89 6.50 5.78 8.14 5.47 0.86 3.72 6.97 6.61 12 E1_Ad KnownBoundary 0 119.87 54.33 38.08 62.76 48.64 194.15 76.18 34.63 47.37 18.86 9.37 6.45 6.66 44.15 78.13 99.63 39.27 106.20 115.20 51.90 74.07 98.46 272.82 13 ER1c ExonRegion 0 52.21 30.73 24.92 42.25 23.93 105.65 28.69 21.89 31.91 14.53 11.70 0.00 0.00 27.25 49.16 44.42 25.31 74.94 75.21 25.30 44.20 73.85 150.75 14 ER1d ExonRegion 1 163.53 79.01 92.98 117.53 89.72 322.05 135.04 93.08 132.01 62.78 46.45 0.00 4.69 132.80 174.25 256.48 144.56 217.27 357.88 97.87 249.73 274.17 715.76 15 E1_Da NovelBoundary 0 28.60 11.45 6.24 25.17 7.89 70.41 18.81 20.13 13.57 5.00 5.21 0.00 0.00 4.65 4.70 14.61 8.42 36.06 52.43 31.26 14.95 21.13 45.07 16 E1a_E2a KnownJunction 1 247.97 109.52 149.67 196.18 149.75 435.60 208.58 147.74 220.95 91.30 67.23 0.00 6.33 128.50 85.67 371.36 211.78 331.46 521.33 137.81 339.71 359.93 973.82 17 E2_Aa NovelBoundary 0 0.00 3.35 8.19 5.83 4.33 49.80 15.81 12.12 7.70 4.14 0.00 0.00 0.00 9.77 0.00 0.00 0.00 1.62 3.58 6.52 0.00 0.00 3.84 18 ER2a ExonRegion 0 17.02 12.32 56.38 62.51 10.81 45.16 20.20 65.46 92.60 44.28 26.00 4.76 4.97 21.33 30.46 47.95 72.38 86.79 76.30 33.80 122.60 68.58 127.67 19 E2_Da NovelBoundary 0 23.56 9.01 20.90 14.18 3.48 25.27 12.90 17.58 21.21 10.07 7.00 0.00 0.00 7.06 18.17 7.26 8.42 6.51 30.02 23.59 9.08 0.00 0.00 20 E2a_E3a KnownJunction 0 0.00 18.02 119.81 180.76 15.79 49.52 29.24 141.17 194.88 86.68 40.38 24.16 21.91 103.48 194.70 110.23 166.43 176.09 328.57 87.25 198.68 327.72 442.01 21 E2a_E3d KnownJunction 0 5.93 3.29 13.04 1.70 0.00 2.61 0.00 7.11 7.00 3.57 0.00 0.00 0.00 0.00 5.69 0.00 3.46 11.11 14.12 2.68 0.00 0.00 0.00 22 E3_Aa NovelBoundary 0 10.96 5.85 18.66 16.61 0.00 45.43 8.17 21.73 24.57 19.18 7.21 0.00 6.82 7.36 6.06 11.19 21.13 22.51 8.38 36.82 11.24 5.39 11.18 23 ER3a ExonRegion 1 4.90 10.37 77.35 140.81 8.09 39.85 21.86 108.72 152.10 71.42 20.88 10.14 19.33 120.70 188.16 173.69 59.66 173.15 301.83 63.05 108.90 306.68 584.89 24 E3_Ab KnownBoundary 1 19.86 8.35 58.48 143.60 7.89 53.49 30.16 104.25 155.12 72.20 7.11 5.40 20.78 79.35 121.89 187.90 21.88 186.83 178.55 77.85 69.19 147.27 458.66 25 ER3b ExonRegion 1 14.55 22.37 41.89 89.74 18.90 47.33 18.20 72.05 94.22 51.57 15.52 13.12 20.23 36.44 77.79 75.05 23.11 139.97 65.10 57.05 81.95 99.49 241.26 26 E3_Da KnownBoundary 0 3.33 6.25 9.08 11.02 0.00 17.38 0.00 4.85 11.37 12.30 0.00 0.00 0.00 0.00 13.85 0.00 9.35 5.84 0.00 12.08 2.53 5.88 8.28 27 E3a_E3c KnownJunction 0 0.00 0.00 0.00 3.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E3a_E3d KnownJunction 0 30.30 30.72 37.20 65.53 57.89 68.94 9.89 59.68 73.55 45.83 31.53 24.31 29.06 28.61 80.47 52.46 32.63 124.86 22.12 63.02 92.11 92.28 186.86 29 ER3c ExonRegion 0 7.86 3.49 0.00 0.51 0.23 2.89 2.52 0.63 0.01 0.04 0.24 0.53 0.00 0.16 0.15 0.96 0.00 0.28 0.00 0.37 0.00 0.14 0.78 30 E3_Ac KnownBoundary 0 35.19 12.50 1.12 11.49 3.99 13.46 2.25 2.34 0.00 1.13 0.00 5.85 0.00 0.00 0.00 12.05 0.00 6.96 4.80 6.07 0.00 0.00 7.26 31 ER3d ExonRegion 0 10.78 5.84 5.74 9.15 7.70 14.50 8.43 7.57 4.99 4.41 1.95 3.81 2.71 3.78 6.38 10.27 0.60 7.39 9.58 8.75 3.40 1.44 7.67 32 E3_Ad KnownBoundary 0 9.93 25.92 17.06 19.91 6.71 2.38 3.84 32.49 20.98 8.81 2.68 6.30 12.50 0.00 0.00 23.93 0.00 7.75 35.01 11.82 8.83 7.59 3.76 33 ER3e ExonRegion 0 60.60 66.40 69.38 94.41 57.81 164.52 85.25 99.76 108.20 76.97 30.71 21.85 17.74 47.76 80.47 49.49 39.11 90.28 43.87 58.65 126.34 98.10 104.28 34 E3_Db NovelBoundary 0 6.15 6.31 7.98 8.29 8.23 8.40 6.58 2.14 3.41 4.97 0.00 12.30 0.00 2.47 24.11 0.00 3.65 10.61 0.00 9.46 0.00 0.00 4.35 35 E3b_E4a KnownJunction 0 128.39 153.13 132.73 151.46 111.21 294.83 219.09 145.36 154.11 97.05 48.17 49.07 53.89 70.99 110.02 89.29 70.87 87.72 63.91 75.42 189.22 173.11 170.21 36 E4_Aa NovelBoundary 0 10.89 18.09 11.59 12.82 11.54 2.73 6.18 18.98 7.55 4.35 4.79 5.25 0.00 0.00 0.00 4.27 4.30 5.35 3.95 16.87 14.70 5.69 12.55 37 ER4a ExonRegion 0 98.03 96.79 128.12 140.54 85.05 186.33 91.67 124.66 170.78 92.15 46.14 34.67 49.71 79.29 105.83 75.19 62.38 84.10 76.61 103.05 148.16 137.85 113.02 38 E4_Ab NovelBoundary 0 95.72 55.38 92.28 123.66 47.96 113.46 38.02 115.17 141.81 78.92 31.06 18.46 12.66 39.67 51.92 53.83 32.16 84.07 64.57 61.94 64.06 105.57 90.23 39 E4_Da NovelBoundary 0 3.56 6.38 11.86 16.12 4.33 17.09 0.00 6.20 11.95 4.59 0.00 0.00 11.69 17.31 0.00 0.00 14.31 9.37 8.38 8.56 18.22 3.12 8.45 40 E4a_E4c KnownJunction 0 239.67 86.70 187.75 236.73 144.91 255.88 122.55 177.81 215.28 105.73 74.55 46.52 39.77 99.59 110.64 104.67 101.26 140.94 92.52 86.61 159.69 187.01 246.27 41 ER4b ExonRegion 0 172.25 81.81 146.86 187.55 117.73 223.02 85.96 152.37 196.86 95.10 70.77 39.30 33.19 91.70 120.74 88.94 88.36 128.21 103.40 92.31 150.70 176.62 216.63 42 ER4c ExonRegion 0 14.08 6.69 9.64 18.95 12.70 21.02 8.80 12.05 11.18 12.83 7.94 5.02 9.55 12.06 8.57 11.33 9.40 13.24 14.65 10.59 11.83 9.76 6.32 43 E4_Ac KnownBoundary 0 69.05 9.01 15.11 24.21 28.61 27.65 18.42 11.75 13.60 8.52 15.32 31.51 6.82 14.66 20.77 12.99 12.81 18.32 36.80 19.56 8.59 14.08 0.00 44 ER4d ExonRegion 0 164.30 82.08 147.31 198.44 125.57 208.63 96.00 176.14 220.62 104.99 55.24 64.79 38.31 104.63 107.73 122.29 94.25 118.12 153.70 92.87 147.17 199.77 202.42 45 E4_Db KnownBoundary 0 3.48 9.67 5.12 10.59 11.63 44.63 2.25 13.43 9.90 14.02 17.53 0.00 6.82 14.89 8.90 16.06 9.35 4.77 9.41 9.01 5.13 12.74 7.94 46 E4b_E4d KnownJunction 0 106.76 57.49 106.18 183.96 67.32 105.17 58.74 143.88 192.50 105.03 27.43 27.91 38.47 55.15 103.34 89.04 68.91 92.81 163.77 89.80 105.39 150.63 179.77 47 ER4e ExonRegion 0 20.74 10.50 10.92 15.60 15.61 25.45 15.34 16.83 8.85 10.37 4.06 11.70 8.42 7.70 4.96 5.35 5.11 5.08 6.39 14.02 3.91 9.06 5.20 48 E4_Ad KnownBoundary 0 23.12 3.35 8.96 15.08 11.88 21.12 7.95 12.45 9.09 12.81 4.84 19.21 0.00 4.59 8.90 0.00 4.77 6.05 11.95 11.25 8.83 9.06 3.93 49 ER4f ExonRegion 0 91.06 71.82 139.58 147.56 88.08 124.66 93.81 119.55 183.54 101.40 45.91 38.71 43.70 87.89 101.27 114.44 83.77 106.76 93.39 98.15 167.77 141.07 185.63 50 E4_Dc NovelBoundary 0 10.74 5.59 4.44 5.06 0.00 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.96 9.54 6.22 8.75 9.01 15.38 0.00 0.00 51 E4c_E5b KnownJunction 0 102.17 91.96 111.85 161.98 86.50 152.47 89.25 142.16 173.15 103.90 63.44 38.71 26.30 95.00 73.43 84.17 77.61 101.60 69.65 105.21 124.60 134.16 145.63 52 ER5a ExonRegion 0 11.54 4.49 7.88 9.06 5.43 6.88 4.41 2.67 2.49 2.81 1.71 0.14 2.85 1.13 3.39 3.03 4.50 3.44 2.24 3.26 1.77 5.64 3.12 53 E5_Ab KnownBoundary 0 9.63 2.50 7.72 5.43 0.00 11.13 6.45 0.00 6.74 1.67 2.42 0.00 0.00 0.00 6.06 3.76 7.67 4.39 0.00 0.00 0.00 3.12 0.00 54 ER5b ExonRegion 0 158.23 113.70 137.70 200.04 83.89 223.50 97.84 156.36 221.05 116.69 44.98 58.43 45.72 101.75 104.27 121.59 90.29 126.73 131.34 88.65 143.84 166.49 196.70 55 E5_Da KnownBoundary 0 71.12 10.06 31.31 28.04 34.63 41.79 29.68 22.06 22.25 8.41 7.42 19.66 0.00 4.18 4.45 15.47 4.77 23.01 18.64 8.44 3.15 5.76 12.80 56 E5a_E5c KnownJunction 0 107.80 77.68 131.46 168.58 50.08 168.71 78.87 135.30 196.12 105.92 29.06 47.27 40.09 58.39 60.94 96.90 53.48 60.31 74.83 84.24 106.87 97.48 173.71 57 ER5c ExonRegion 0 21.18 11.27 32.63 18.80 11.64 24.14 13.68 16.21 12.01 6.60 7.75 9.56 8.31 4.27 3.15 14.86 5.92 13.84 14.77 12.16 4.31 3.97 9.15 58 E5_Db KnownBoundary 0 15.78 18.15 30.13 27.67 4.33 9.54 13.51 14.87 11.17 10.37 5.05 0.00 19.97 7.36 4.45 32.21 4.68 20.85 16.75 2.43 0.00 5.57 18.95 59 ER5d ExonRegion 0 23.14 6.78 22.75 15.50 9.22 13.17 7.45 18.75 9.06 10.22 5.32 1.72 7.98 3.15 4.75 10.24 7.78 11.79 10.51 14.14 4.91 4.66 9.97 60 E5_Ac KnownBoundary 0 22.89 3.29 28.18 21.58 7.64 13.46 23.58 4.23 2.98 6.61 12.79 0.00 6.33 2.41 0.00 3.93 8.60 10.45 0.00 6.52 8.46 2.57 9.99 61 ER5e ExonRegion 0 107.15 72.44 121.80 142.90 64.09 149.24 68.50 100.23 162.04 80.99 44.77 18.83 34.91 74.09 108.51 78.51 63.45 92.64 54.79 87.61 121.31 115.84 141.92 62 E5_Dc KnownBoundary 0 37.34 52.03 35.89 64.59 40.92 83.42 34.84 37.13 66.93 23.75 16.00 12.00 12.99 22.13 26.95 32.13 32.82 47.01 4.71 64.11 53.31 54.62 68.80 63 E5_Dd KnownBoundary 0 46.16 50.39 73.68 118.77 23.94 82.06 35.37 53.15 55.12 40.13 12.00 12.00 0.00 19.19 33.25 21.36 34.03 44.23 17.13 31.89 44.48 52.97 32.86 64 ER5f ExonRegion 0 79.72 94.90 131.11 200.80 66.89 170.54 74.58 111.20 150.68 73.78 35.44 25.98 18.76 73.63 108.31 55.48 67.12 106.55 27.61 99.29 108.72 108.34 143.90 65 ER5g ExonRegion 0 95.93 72.81 98.11 151.63 108.09 131.15 77.74 122.33 154.83 84.06 37.86 36.89 26.16 59.33 115.16 50.58 51.81 47.50 55.57 84.66 83.76 126.04 101.25 66 ER5h ExonRegion 0 8.77 6.97 2.10 1.95 3.82 13.62 2.46 4.69 3.88 2.95 4.42 0.62 2.01 4.41 0.00 5.52 0.47 0.00 0.00 6.99 2.52 1.19 1.26