Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PTPN14 Gene 0 6.24 1.01 4.55 1.45 2.73 1.54 2.91 3.04 5.46 2.67 5.20 3.15 4.66 4.41 18.97 1.83 12.78 0.69 0.96 1.62 40.85 18.69 17.64 2 486173 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.00 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 491277 Transcript 0 2.04 0.37 1.58 0.99 0.99 0.59 0.98 1.13 1.63 0.67 1.58 0.95 1.06 1.04 6.97 0.54 4.06 0.55 0.61 0.74 11.16 3.57 5.23 4 366956 Transcript 0 9.93 1.26 7.55 3.00 2.70 3.07 3.12 4.75 11.87 5.39 13.52 7.96 11.21 9.67 39.07 2.06 34.50 0.07 0.01 0.71 99.55 61.66 42.27 5 473261 Transcript 0 1.74 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.38 0.00 0.39 2.91 0.00 0.00 0.00 0.00 0.00 0.38 0.00 0.00 1.38 0.00 0.00 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2_Aa NovelBoundary 0 3.78 0.00 0.00 0.00 0.00 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.36 19.66 0.00 13.18 0.00 0.00 0.00 27.74 12.00 19.46 9 ER2a ExonRegion 0 1.39 0.00 1.13 0.23 0.16 0.72 0.00 0.69 2.57 0.27 3.87 0.00 0.61 1.27 12.44 0.00 8.82 0.43 0.00 0.00 31.54 8.74 10.93 10 E2_Ab KnownBoundary 0 2.96 0.00 0.00 1.80 4.16 2.90 0.00 2.22 1.16 0.00 2.58 0.00 0.00 0.00 4.45 0.00 18.70 0.00 0.00 0.00 52.63 5.94 4.27 11 ER2b ExonRegion 0 2.19 0.00 0.45 0.55 1.56 0.83 0.00 1.92 2.18 0.00 9.03 0.00 0.00 2.10 8.55 0.00 16.14 0.00 0.00 0.00 39.71 13.37 9.08 12 E2_Ac KnownBoundary 0 3.41 0.00 2.99 0.00 0.00 0.00 0.00 2.55 4.72 1.50 12.37 0.00 0.00 2.12 27.07 0.00 16.46 0.00 0.00 0.00 45.10 28.60 6.57 13 ER2c ExonRegion 0 2.91 0.00 1.23 0.72 0.00 1.24 0.00 1.60 3.74 0.00 4.45 0.00 0.00 1.79 26.47 0.00 7.67 0.00 0.00 0.00 47.66 14.01 15.93 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2a_E4a KnownJunction 0 3.19 0.00 1.51 0.00 0.00 5.05 0.00 0.00 3.59 0.00 2.68 0.00 0.00 0.00 27.32 0.00 0.00 0.00 0.00 0.00 53.07 10.84 24.41 16 ER3a ExonRegion 0 4.73 1.11 3.61 1.02 2.82 1.04 2.95 2.69 2.32 1.73 0.86 2.85 2.57 1.86 8.47 1.62 3.38 1.21 1.84 2.22 1.95 1.97 4.76 17 I3_SR2 SilentIntronRegion 0 6.35 0.00 2.45 1.36 6.12 0.00 2.84 0.00 0.00 2.29 0.00 0.00 9.38 0.00 19.89 0.00 9.90 0.00 0.00 0.00 2.20 0.89 2.94 18 I3_AR3 ActiveIntronRegion 0 6.35 0.00 2.45 1.36 5.35 0.00 3.97 0.00 0.00 2.29 0.00 0.00 8.34 0.00 20.95 0.00 9.90 0.00 0.00 0.00 2.20 2.08 5.87 19 ER4a ExonRegion 0 3.14 0.00 1.88 0.94 0.53 1.27 0.53 4.05 5.42 0.75 5.53 0.00 1.21 4.12 23.28 0.00 15.96 0.00 0.00 0.64 71.60 17.86 21.43 20 E4_Da KnownBoundary 0 7.56 0.00 2.78 1.83 0.00 0.00 0.00 3.57 9.98 1.48 14.85 0.00 19.80 2.30 13.35 0.00 8.60 0.00 0.00 5.62 88.71 29.15 8.19 21 ER4b ExonRegion 0 2.85 0.00 1.43 1.53 0.00 0.15 0.92 6.63 9.16 2.48 10.17 0.00 1.17 3.97 19.18 0.00 13.43 0.00 0.00 2.25 89.95 21.53 27.08 22 E4b_E5a KnownJunction 0 3.26 0.00 0.00 2.00 0.00 0.00 0.00 11.83 13.05 3.09 7.00 0.00 0.00 9.42 8.90 0.00 25.06 0.00 0.00 0.00 89.89 20.21 14.94 23 ER5a ExonRegion 0 6.15 1.54 1.28 2.34 3.21 1.79 3.45 7.05 8.49 4.20 14.11 2.85 7.04 8.59 20.53 0.00 25.92 0.00 0.00 0.83 104.00 37.37 34.83 24 E5a_E6a KnownJunction 0 17.78 3.35 1.69 5.49 0.00 2.84 2.08 11.50 9.20 4.94 20.01 6.30 0.00 7.42 30.29 0.00 37.68 0.00 0.00 2.94 109.41 47.15 23.13 25 ER6a ExonRegion 0 5.79 2.18 3.23 2.93 1.39 0.60 4.16 5.93 9.59 6.13 16.33 3.67 10.15 3.41 32.95 3.09 34.90 0.96 0.00 0.78 102.09 49.24 31.46 26 E6a_E7a KnownJunction 0 3.41 3.35 5.50 0.00 0.00 0.00 1.90 6.74 7.93 8.35 12.48 6.30 12.66 4.94 37.83 0.00 25.53 0.00 0.00 0.00 87.79 60.56 31.16 27 ER7a ExonRegion 0 9.31 0.63 5.80 2.91 3.19 0.40 3.86 5.87 10.50 8.79 14.55 7.89 20.35 8.81 27.60 4.33 32.09 0.00 0.00 1.60 100.75 68.24 33.60 28 E7a_E8a KnownJunction 0 17.71 0.00 8.99 7.16 12.31 2.61 5.96 9.32 13.45 6.42 12.16 6.00 26.62 11.77 49.32 0.00 33.10 0.00 0.00 0.00 96.00 70.11 30.82 29 ER8a ExonRegion 0 4.77 1.46 7.13 3.05 4.64 3.28 6.71 4.48 11.27 8.66 12.85 14.88 13.61 7.73 30.73 1.55 28.92 1.33 0.00 0.00 83.24 51.44 25.81 30 E8a_E9a KnownJunction 0 6.52 0.00 4.02 0.00 0.00 5.68 4.50 2.55 11.86 5.35 11.95 0.00 13.64 13.54 40.67 4.10 27.21 0.00 0.00 0.00 100.76 76.48 47.63 31 ER9a ExonRegion 0 9.79 4.71 4.96 3.21 0.00 4.06 5.63 3.85 9.97 4.69 6.24 9.00 11.88 8.88 21.99 1.15 40.77 0.00 0.00 2.08 96.46 65.39 32.27 32 E9a_E10a KnownJunction 0 9.41 0.00 9.49 3.90 0.00 8.29 0.00 10.31 14.50 6.07 14.21 13.50 6.33 14.42 32.14 3.25 58.34 0.00 0.00 2.75 92.97 71.52 31.33 33 ER10a ExonRegion 0 9.04 1.03 5.37 3.71 0.00 1.79 2.95 5.81 16.35 5.03 13.64 13.91 29.40 14.43 46.13 4.21 57.26 0.00 0.00 0.45 84.66 95.63 61.34 34 E10a_E11a KnownJunction 0 3.26 2.43 7.30 5.39 4.33 2.67 4.50 0.00 15.48 7.28 11.74 25.81 34.74 12.36 69.60 3.50 46.84 0.00 0.00 0.00 73.89 182.97 80.75 35 ER11a ExonRegion 0 4.06 0.14 13.92 4.23 0.00 4.36 2.78 7.42 19.82 4.48 24.56 14.61 24.36 12.51 48.69 0.41 54.54 0.00 0.00 1.16 92.61 86.66 52.09 36 E11a_E12a KnownJunction 0 6.74 0.00 11.32 4.76 0.00 5.45 3.89 6.65 15.91 5.72 27.59 18.91 6.33 26.66 39.43 0.00 38.24 0.00 0.00 0.00 95.82 57.25 56.68 37 ER12a ExonRegion 0 13.01 0.88 8.42 5.06 3.97 9.70 2.03 3.67 17.68 8.03 26.92 21.02 26.90 8.86 52.96 2.04 54.84 0.00 0.00 1.31 122.24 102.27 72.21 38 E12a_E13a KnownJunction 0 24.82 3.03 5.59 3.20 4.33 11.02 0.00 4.64 25.87 7.82 18.53 32.56 27.43 9.54 89.75 0.00 68.35 0.00 0.00 0.00 170.07 199.87 119.51 39 ER13a ExonRegion 0 8.21 0.53 6.49 0.80 1.57 3.19 1.16 2.47 13.22 6.37 12.83 15.00 18.11 13.13 47.12 4.82 28.97 0.00 0.00 0.00 108.44 87.54 53.26 40 E13a_E14a KnownJunction 0 7.56 0.00 9.82 0.00 0.00 0.00 0.00 2.55 9.58 9.62 13.64 0.00 0.00 4.77 16.19 0.00 16.36 0.00 0.00 0.00 92.91 60.56 23.82 41 ER14a ExonRegion 0 10.13 2.32 8.08 1.19 3.62 0.00 2.60 0.96 12.80 3.66 8.07 11.07 12.59 9.11 39.70 1.92 41.16 0.00 0.00 0.00 115.32 50.27 36.39 42 E14a_E15a KnownJunction 0 0.00 2.83 3.13 1.27 3.48 0.00 4.50 0.00 12.53 3.17 5.05 17.56 12.99 4.83 50.68 0.00 33.94 0.00 0.00 0.00 164.95 43.48 68.38 43 ER15a ExonRegion 0 3.78 0.72 4.24 0.67 1.34 1.84 1.51 2.48 8.21 3.30 7.59 1.93 7.13 8.28 33.13 1.95 21.80 0.10 0.00 0.88 95.89 29.03 32.94 44 E15_Da NovelBoundary 0 0.00 0.00 1.30 0.00 0.00 0.00 2.16 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.94 0.00 45 E15a_E16a KnownJunction 0 16.15 0.00 0.00 7.09 4.07 0.00 0.00 4.93 1.79 3.12 11.79 0.00 0.00 12.13 31.15 0.00 23.00 0.00 0.00 0.00 98.60 17.08 31.93 46 I15_SR2 SilentIntronRegion 0 1.19 0.58 0.19 1.04 0.56 0.19 0.53 0.54 0.58 0.00 0.00 0.75 0.41 0.17 1.55 0.00 0.00 0.00 0.00 0.00 8.49 2.54 0.93 47 ER16a ExonRegion 0 6.31 0.00 8.87 5.29 2.23 0.65 4.47 1.63 6.00 3.28 12.17 1.26 2.74 8.28 25.57 3.22 26.87 0.00 0.00 0.00 83.70 37.21 30.16 48 E16a_E17a KnownJunction 0 10.82 0.00 23.57 5.09 7.89 0.00 5.17 6.00 9.87 2.63 9.21 0.00 0.00 9.59 63.04 0.00 34.78 0.00 0.00 0.00 67.65 51.80 42.85 49 E17_Ab NovelBoundary 0 14.00 0.00 17.06 6.99 3.82 11.58 4.46 9.36 8.97 14.69 16.58 0.00 6.82 19.95 24.60 3.67 26.09 0.00 0.00 0.00 120.16 34.96 40.38 50 ER17a ExonRegion 0 10.12 0.00 20.22 5.03 3.93 6.88 2.98 5.19 9.07 9.71 14.01 0.00 6.89 16.34 46.87 3.44 31.05 0.00 0.00 0.00 102.40 38.35 43.50 51 ER17b ExonRegion 0 7.18 1.11 13.33 7.03 4.46 3.58 4.52 3.34 9.15 5.58 14.88 0.60 7.17 8.72 33.42 5.53 26.81 0.00 0.00 1.19 100.44 40.04 43.58 52 E17a_E18a KnownJunction 0 9.78 0.00 8.96 3.96 0.00 2.90 11.75 2.18 11.55 5.48 14.42 6.30 0.00 9.48 38.45 4.02 34.50 0.00 0.00 0.00 73.21 39.19 32.86 53 ER18a ExonRegion 0 9.98 0.00 6.81 3.70 2.05 4.28 2.90 1.82 7.49 4.53 11.64 3.22 4.58 5.97 40.21 2.30 19.78 1.09 0.00 2.54 77.10 36.76 35.95 54 E18a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 E18a_E20a KnownJunction 0 10.82 0.00 10.35 3.70 0.00 2.90 0.00 4.11 10.01 2.55 14.69 0.00 0.00 0.00 58.97 4.36 17.30 0.00 0.00 0.00 90.94 39.99 35.00 56 ER19a ExonRegion 0 3.49 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.76 0.00 0.79 5.82 0.00 0.00 0.00 0.00 0.00 0.75 0.00 0.00 2.75 0.00 0.00 57 ER20a ExonRegion 0 17.93 1.18 11.17 1.92 4.65 2.88 5.35 3.07 14.85 5.79 19.32 4.05 8.52 5.94 41.68 4.77 19.55 0.00 0.00 2.28 93.20 45.70 35.29 58 E20a_E21a KnownJunction 0 14.52 3.16 11.62 0.00 0.00 7.04 6.05 0.00 10.04 1.18 7.90 0.00 13.31 17.72 25.71 0.00 61.24 0.00 0.00 0.00 73.08 51.25 41.57 59 ER21a ExonRegion 0 11.09 1.38 10.66 1.07 5.50 3.42 4.08 1.59 12.92 7.50 9.79 5.54 4.55 7.55 43.08 4.71 34.10 0.00 0.00 2.63 98.20 40.22 43.42 60 E21a_E22a KnownJunction 0 18.30 2.57 7.89 1.80 4.33 5.28 1.99 0.00 9.26 4.54 14.42 6.45 6.82 4.94 33.75 8.72 25.53 0.00 0.00 0.00 128.62 27.74 35.94 61 ER22a ExonRegion 0 24.36 2.13 7.75 3.11 9.15 2.48 7.89 7.52 11.59 3.99 10.76 2.44 3.80 9.38 33.88 2.50 19.86 0.00 0.30 1.40 78.77 50.73 33.68