Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IL10 Gene 0 25.70 3.67 2.45 3.98 5.79 4.25 5.98 5.78 9.35 2.60 46.89 86.11 28.13 30.92 49.93 13.17 8.60 2.13 2.14 4.77 1.25 2.42 8.40 2 423557 Transcript 0 12.65 1.33 0.89 1.31 2.63 1.85 2.57 1.98 3.80 1.00 35.75 55.96 15.51 28.26 55.40 9.00 4.78 0.87 0.78 1.73 0.45 0.84 5.84 3 471071 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 5.90 0.00 0.00 0.00 1.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 367099 Transcript 0 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 8.39 7.39 0.81 4.97 4.44 0.00 1.32 0.00 0.00 0.00 0.00 0.51 0.00 5 IG28 Intergenic 0 0.60 0.01 0.00 0.01 0.28 0.03 0.14 0.03 0.07 0.00 3.08 22.55 13.12 4.01 7.44 5.83 2.11 0.01 0.04 0.06 0.01 0.29 1.28 6 IG28_SR2 SilentIntergenicRegion 0 0.44 0.00 0.00 0.00 0.34 0.00 0.19 0.00 0.03 0.00 2.88 17.84 12.16 4.46 6.20 4.77 1.95 0.00 0.03 0.15 0.00 0.22 0.92 7 IG28_AR2 ActiveIntergenicRegion 0 0.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 20.07 13.64 1.48 10.55 0.81 0.00 0.00 0.00 0.00 0.00 0.00 1.60 8 IG28_AR1 ActiveIntergenicRegion 0 0.51 0.00 0.00 0.00 0.00 0.22 0.00 0.00 0.00 0.00 2.54 11.32 20.67 3.15 12.27 8.82 0.40 0.00 0.00 0.00 0.00 0.00 0.36 9 IG28_SR1 SilentIntergenicRegion 0 0.69 0.02 0.00 0.01 0.26 0.03 0.12 0.05 0.09 0.00 3.20 25.42 13.33 3.82 7.90 6.26 2.26 0.01 0.04 0.02 0.01 0.33 1.51 10 ER1a ExonRegion 0 6.79 0.00 0.00 0.00 1.83 2.92 0.09 0.00 1.42 0.39 30.09 28.90 10.43 20.64 42.56 9.16 7.52 0.63 0.00 0.00 0.00 0.47 4.06 11 E1a_E2a KnownJunction 0 10.15 0.00 0.00 0.00 0.00 0.00 2.03 0.00 1.74 0.00 33.75 50.87 6.82 40.14 75.65 8.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 I1 Intron 1 1.75 0.00 0.00 0.00 0.17 0.00 0.00 0.00 0.23 0.00 6.78 61.18 16.94 6.78 7.86 6.82 2.53 0.00 0.20 0.00 0.00 0.80 1.50 13 I1_SR1 SilentIntronRegion 0 1.05 0.00 0.00 0.00 0.43 0.00 0.00 0.00 0.00 0.00 6.92 46.26 18.12 6.03 8.48 4.83 2.61 0.00 0.51 0.00 0.00 0.00 2.58 14 I1_AR1 ActiveIntronRegion 1 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.44 0.00 7.51 77.51 18.16 7.55 7.83 9.16 2.78 0.00 0.00 0.00 0.00 1.49 0.87 15 I1_SR2 SilentIntronRegion 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.98 0.00 5.25 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E2_Aa NovelBoundary 1 3.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.79 82.38 46.59 2.41 4.45 17.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER2a ExonRegion 0 5.47 0.00 0.00 0.00 2.27 0.00 0.79 0.00 0.97 0.00 29.44 62.63 10.55 22.28 46.81 5.99 6.00 0.00 0.00 0.00 0.00 0.00 7.44 18 E2a_E3c KnownJunction 0 2.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.27 18.61 6.82 22.60 52.04 7.18 0.00 0.00 0.00 0.00 0.00 0.00 6.74 19 I2 Intron 0 0.00 0.00 0.00 0.00 0.87 0.00 0.00 0.00 0.60 0.00 10.11 34.97 6.58 4.56 4.52 7.77 2.16 0.00 0.00 0.00 0.00 0.68 0.96 20 I2_SR1 SilentIntronRegion 0 0.00 0.00 0.00 0.00 0.89 0.00 0.00 0.00 0.61 0.00 10.23 35.39 6.67 4.62 4.58 7.87 2.16 0.00 0.00 0.00 0.00 0.69 0.97 21 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 5.90 0.00 0.00 0.00 1.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3b ExonRegion 0 18.46 0.00 0.00 1.59 0.80 0.72 3.64 0.00 0.72 0.00 13.66 18.62 6.13 6.55 8.93 9.08 3.38 0.00 0.00 0.00 0.00 0.82 6.30 23 E3_Ac KnownBoundary 0 16.23 0.00 0.00 0.00 3.74 0.00 0.00 0.00 0.00 0.00 26.48 30.16 14.12 21.48 21.14 23.16 4.77 0.00 0.00 0.00 0.00 0.00 12.21 24 ER3c ExonRegion 0 21.60 0.00 0.00 2.65 1.11 2.04 0.87 1.24 4.27 0.00 81.46 103.25 16.51 70.24 81.52 37.03 14.05 0.00 0.00 0.00 0.00 0.71 9.43 25 E3_Da NovelBoundary 0 3.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.79 19.06 19.64 11.77 14.34 3.67 4.02 0.00 0.00 0.00 0.00 0.00 11.95 26 E3a_E4a KnownJunction 1 10.45 0.00 0.00 1.30 0.00 2.67 0.00 2.51 1.59 0.00 55.54 133.24 0.00 31.31 68.36 15.55 4.30 0.00 0.00 0.00 0.00 0.00 8.54 27 I3 Intron 0 2.79 0.00 0.30 0.22 0.00 0.00 0.15 0.28 1.82 0.00 12.43 18.07 3.52 8.48 6.59 2.61 1.45 0.00 0.00 0.00 0.12 0.46 0.81 28 I3_SR1 SilentIntronRegion 0 2.80 0.00 0.30 0.22 0.00 0.00 0.15 0.28 1.82 0.00 12.46 18.11 3.53 8.50 6.61 2.62 1.45 0.00 0.00 0.00 0.12 0.46 0.81 29 ER4a ExonRegion 0 11.80 0.00 0.00 0.29 8.03 5.22 0.94 4.40 4.92 0.00 61.76 112.43 20.04 34.52 54.90 11.84 7.40 0.00 0.00 0.00 0.00 2.21 5.29 30 E4_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 9.42 7.05 0.00 12.01 0.00 0.00 4.68 0.00 0.00 0.00 0.00 0.00 0.00 31 E4a_E5a KnownJunction 0 0.00 0.00 0.00 1.73 14.94 0.00 3.97 3.66 11.55 0.00 72.49 93.63 33.76 20.19 67.74 0.00 7.29 0.00 0.00 0.00 0.00 3.12 12.21 32 ER4b ExonRegion 0 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 8.39 7.39 0.81 4.97 4.44 0.00 1.32 0.00 0.00 0.00 0.00 0.51 0.00 33 ER5a ExonRegion 0 18.92 0.00 0.00 2.81 5.74 2.27 6.54 4.58 11.30 0.00 83.46 91.81 28.28 41.37 83.03 23.95 8.74 0.00 0.00 0.00 0.00 3.68 19.95 34 E5_Da KnownBoundary 0 62.83 0.00 0.00 4.13 3.99 5.79 12.63 4.89 16.78 0.00 91.97 119.44 20.13 63.75 132.27 45.29 8.04 0.00 0.00 0.00 0.00 3.12 24.16 35 ER5b ExonRegion 0 38.02 6.64 4.44 6.54 9.07 6.35 9.94 9.88 14.86 4.63 56.19 118.78 42.92 35.64 59.93 13.93 10.36 3.73 3.88 8.64 2.26 3.74 10.97