Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DSTYK Gene 0 31.70 54.12 37.99 52.13 44.46 44.02 36.69 42.26 77.12 42.92 17.33 17.15 23.81 19.58 20.15 10.70 14.11 44.74 38.60 70.55 63.10 55.30 52.48 2 419742 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 367160 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 367161 Transcript 0 0.00 0.00 1.39 0.00 3.40 0.00 3.62 0.00 3.15 0.00 4.84 0.00 0.00 3.00 9.15 0.00 0.00 6.51 9.41 12.46 5.62 3.12 11.01 5 367162 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 0.87 0.36 0.00 0.00 0.00 1.89 0.00 0.00 0.25 3.37 2.16 0.00 0.00 0.00 2.73 0.00 0.00 3.32 3.19 2.32 10.31 1.53 7.17 7 E1_Ab KnownBoundary 0 3.26 0.00 0.00 3.76 0.00 10.62 0.00 0.00 2.66 5.83 4.90 0.00 5.84 0.00 0.00 0.00 4.30 7.09 9.13 6.52 31.01 8.70 32.18 8 ER1b ExonRegion 0 1.98 1.29 3.34 1.27 3.12 9.84 3.73 4.83 15.20 10.67 7.54 0.23 2.91 4.60 2.77 3.08 3.42 19.89 10.48 27.85 47.69 9.51 29.78 9 E1a_E2a KnownJunction 0 3.78 2.76 2.60 4.23 8.23 5.22 1.99 9.00 25.69 14.08 2.21 6.30 0.00 4.59 5.44 0.00 0.00 36.15 17.88 30.30 36.94 8.45 19.72 10 E1a_E3a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.64 1.68 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.09 5.57 3.84 11 ER2a ExonRegion 0 5.36 12.44 7.88 13.52 9.62 17.44 11.41 16.52 42.19 23.49 10.97 1.16 7.48 14.17 8.14 5.43 14.51 47.74 27.73 60.04 70.00 21.34 38.04 12 E2a_E3a KnownJunction 0 3.04 20.46 1.71 29.73 7.72 14.88 15.77 19.67 60.88 25.52 22.22 6.30 11.53 13.89 10.75 8.37 4.77 44.81 38.31 68.39 70.80 50.70 25.35 13 I2_AR1 ActiveIntronRegion 0 13.50 1.70 0.00 11.31 4.77 0.00 1.68 6.12 6.88 5.70 0.00 3.98 2.15 0.00 0.00 0.00 4.55 2.65 5.34 6.21 1.61 0.00 7.22 14 ER3a ExonRegion 0 9.64 28.39 19.30 27.94 16.52 35.27 31.94 26.41 67.39 35.04 26.51 18.53 26.29 22.58 11.79 7.54 15.88 56.35 46.16 85.07 77.03 51.01 54.99 15 E3a_E4a KnownJunction 0 27.41 23.29 17.15 54.74 35.74 33.56 40.76 41.69 85.33 43.54 36.06 7.50 33.44 26.72 19.66 7.95 13.00 90.12 43.95 81.24 78.83 87.32 50.45 16 E4a_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 14.09 26.44 14.49 50.47 34.23 27.82 36.89 42.50 85.82 37.49 39.12 11.94 38.81 36.85 14.81 5.02 28.80 84.42 48.44 85.18 87.16 66.17 69.37 18 ER4b ExonRegion 0 7.71 29.62 28.27 39.22 22.53 45.70 27.49 26.16 86.95 42.62 40.15 29.95 30.12 25.17 15.37 10.32 26.37 83.86 43.78 90.82 116.38 60.19 83.67 19 E4b_E5a KnownJunction 0 6.37 24.60 47.31 27.67 24.70 55.42 30.65 32.08 108.62 57.32 32.96 24.46 18.83 48.80 18.91 11.79 47.69 77.97 54.78 69.35 92.67 49.29 87.50 20 ER5a ExonRegion 0 5.01 28.20 26.17 36.13 39.63 42.79 29.99 29.69 85.24 49.96 31.23 43.14 21.22 25.89 13.33 11.39 16.58 79.19 69.93 79.94 89.04 54.72 71.21 21 E5a_E6a KnownJunction 0 9.33 21.44 13.13 29.10 38.29 40.37 34.05 32.12 72.31 41.80 31.48 37.36 0.00 14.07 19.90 12.30 8.13 81.25 30.40 76.83 109.41 37.78 44.13 22 ER6a ExonRegion 0 11.95 13.65 14.19 23.11 20.87 24.17 17.45 27.39 61.01 29.64 15.81 31.75 14.90 19.06 13.41 8.78 21.93 74.20 23.43 65.82 107.54 30.97 64.48 23 E6_Da KnownBoundary 1 14.37 9.27 23.65 25.54 16.30 11.98 18.11 26.62 49.42 27.64 2.37 37.81 5.84 7.06 10.75 3.59 28.52 74.12 16.47 82.33 76.85 16.41 84.42 24 E6a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER6b ExonRegion 0 10.29 17.73 18.64 21.26 25.80 30.45 20.80 24.42 67.33 33.79 16.49 13.05 9.31 24.09 9.89 12.02 14.83 42.89 36.63 74.48 89.88 43.45 53.66 26 E6b_E7a KnownJunction 0 5.78 29.86 16.41 26.10 20.54 34.13 23.54 26.12 39.21 21.60 7.37 24.46 6.82 19.48 18.54 8.37 4.58 54.55 22.21 47.75 97.61 14.27 26.97 27 ER7a ExonRegion 0 6.32 17.99 11.64 20.62 18.20 31.39 14.93 12.43 59.38 30.75 13.93 14.12 16.88 20.64 8.95 12.23 14.37 49.89 31.54 66.94 77.60 26.96 41.25 28 E7a_E8a KnownJunction 0 3.41 15.19 9.22 17.45 18.59 35.89 25.88 30.48 48.41 27.00 24.01 20.26 8.28 17.78 10.75 0.00 17.11 25.99 9.60 97.09 75.68 18.68 41.23 29 ER8a ExonRegion 0 3.57 12.75 12.46 18.37 14.52 28.55 20.92 29.75 52.03 40.14 15.92 14.83 16.73 24.10 10.31 12.18 16.25 61.17 34.41 75.13 84.19 29.14 51.07 30 E8a_E9a KnownJunction 0 6.52 12.23 10.35 24.11 31.41 15.39 29.59 35.65 49.80 31.19 16.43 6.00 15.10 16.95 19.90 20.25 0.00 43.69 28.99 71.01 100.88 49.60 40.21 31 ER8b ExonRegion 0 6.35 14.11 12.79 22.40 24.42 13.75 25.49 32.08 47.47 37.42 18.97 5.95 9.38 21.01 19.95 16.90 9.49 59.71 33.45 74.07 102.20 42.58 59.83 32 ER9a ExonRegion 0 5.24 15.24 12.96 21.62 18.31 29.23 17.32 23.35 50.93 36.90 14.77 11.33 11.88 20.58 11.74 9.25 11.57 39.43 23.85 64.36 91.30 31.97 44.71 33 E9a_E10a KnownJunction 0 19.71 31.70 13.25 23.01 11.80 32.37 16.69 5.79 49.80 30.11 11.63 5.55 6.17 22.07 0.00 15.64 8.32 44.81 13.46 64.11 71.29 45.86 56.17 34 ER10a ExonRegion 0 13.89 37.25 19.34 38.47 27.81 36.43 23.60 12.66 60.55 31.80 22.06 3.57 19.71 18.73 14.71 12.33 16.33 49.95 30.26 75.16 82.87 44.43 61.44 35 E10a_E11a KnownJunction 0 7.41 55.65 27.76 43.38 39.47 63.37 27.95 16.59 74.16 30.35 16.00 6.15 19.48 32.32 9.89 19.48 21.79 68.11 26.07 47.17 83.40 24.06 79.73 36 E11_Ab NovelBoundary 0 16.97 28.61 20.70 30.13 26.99 45.49 38.42 21.07 60.44 36.69 4.69 12.60 6.82 13.89 19.16 7.95 18.98 69.72 38.78 81.88 87.85 29.51 42.68 37 ER11a ExonRegion 0 9.14 36.04 24.21 35.22 32.00 53.84 34.63 19.36 67.78 34.04 11.06 13.68 15.76 23.06 18.80 14.15 22.05 63.93 31.98 64.17 93.08 26.59 61.32 38 ER11b ExonRegion 0 9.55 33.55 26.30 42.10 27.68 47.62 35.54 16.34 59.19 38.94 16.06 20.64 13.13 15.65 17.09 7.66 15.22 55.66 36.95 78.32 76.25 64.47 49.96 39 E11_Da NovelBoundary 0 17.93 0.00 1.83 5.13 4.07 0.00 0.00 2.55 2.72 0.00 0.00 0.00 0.00 0.00 0.00 8.37 0.00 8.37 0.00 12.21 6.24 0.00 0.00 40 E11a_E12a KnownJunction 0 10.30 35.45 38.23 63.46 24.28 51.39 46.46 23.99 68.00 35.94 13.21 12.60 6.49 7.95 13.35 4.02 4.49 40.62 37.27 68.77 67.34 37.84 49.51 41 E11a_E13a KnownJunction 0 0.00 0.00 1.39 0.00 3.40 0.00 3.62 0.00 3.15 0.00 4.84 0.00 0.00 3.00 9.15 0.00 0.00 6.51 9.41 12.46 5.62 3.12 11.01 42 E12_Aa NovelBoundary 0 14.00 3.35 1.83 1.27 29.46 2.84 1.68 4.35 1.62 5.02 6.48 0.00 0.00 0.00 0.00 3.42 0.00 4.89 0.00 9.33 2.97 3.06 3.67 43 ER12a ExonRegion 0 6.08 24.79 23.80 40.80 37.44 44.96 27.27 30.80 66.28 43.40 13.64 9.43 21.37 14.02 12.31 11.05 13.59 48.40 38.93 72.56 80.84 37.15 44.66 44 E12a_E13a KnownJunction 0 10.45 34.27 17.06 25.70 16.55 39.30 10.91 43.62 63.63 30.30 9.84 0.00 13.64 2.41 0.00 3.50 8.60 40.58 48.75 61.68 53.19 50.64 51.05 45 ER13a ExonRegion 0 44.19 71.30 49.30 66.49 57.97 51.10 44.35 53.07 87.64 48.61 16.31 19.10 27.28 20.08 24.98 11.94 13.80 41.25 40.59 71.11 55.33 64.29 53.57 46 ER13b ExonRegion 0 0.00 0.00 1.23 0.00 0.00 1.83 2.65 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94