Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BATF3 Gene 0 20.25 1.80 7.52 3.47 9.26 7.10 8.09 6.39 7.09 3.89 19.69 10.74 26.34 26.34 20.05 13.85 34.31 3.11 0.24 10.64 10.02 11.47 4.86 2 243440 Transcript 0 13.15 1.56 4.40 3.22 0.44 6.39 2.83 2.35 2.16 2.26 20.84 5.05 14.62 15.35 20.10 11.03 35.10 1.17 0.00 13.00 5.96 5.97 3.97 3 478275 Transcript 1 16.12 0.86 1.80 2.24 8.55 4.27 6.71 3.90 5.93 3.01 3.07 10.43 19.28 6.56 3.64 7.73 12.40 1.23 0.10 7.26 3.87 4.85 2.48 4 471382 Transcript 0 3.84 0.00 0.87 0.70 0.25 1.65 0.08 0.78 0.00 0.00 1.97 0.00 0.16 0.13 1.18 2.90 0.31 0.93 0.00 2.46 0.00 0.07 0.07 5 IG13_SR2 SilentIntergenicRegion 0 7.71 12.18 5.56 16.61 16.79 15.99 7.35 9.55 12.95 7.48 1.84 1.11 3.08 1.76 2.27 2.36 2.09 5.18 5.96 9.85 2.23 1.12 3.16 6 ER1a ExonRegion 0 4.58 0.61 1.50 0.34 0.87 4.44 1.94 0.63 0.90 0.35 10.52 3.65 9.60 11.33 8.31 6.34 25.31 0.53 0.00 2.81 6.29 3.42 3.58 7 E1a_E2b KnownJunction 0 21.71 2.50 7.30 6.09 0.00 8.35 3.71 4.07 3.41 4.16 31.17 6.45 19.64 19.37 31.89 15.72 44.88 1.82 0.00 23.20 5.62 8.51 4.35 8 E2_Aa NovelBoundary 0 20.67 0.00 1.60 4.79 10.44 0.00 8.52 0.00 5.50 0.00 0.00 12.15 20.29 0.00 0.00 7.18 9.16 2.57 0.00 3.26 0.00 0.00 4.35 9 ER2a ExonRegion 1 16.12 0.86 1.80 2.24 8.55 4.27 6.71 3.90 5.93 3.01 3.07 10.43 19.28 6.56 3.64 7.73 12.40 1.23 0.10 7.26 3.87 4.85 2.48 10 E2_Ab KnownBoundary 0 32.30 0.00 3.02 2.06 0.00 2.21 1.63 6.41 4.08 3.49 1.95 6.30 0.00 15.42 0.00 7.78 13.74 2.03 0.00 5.75 11.12 0.00 0.00 11 ER2b ExonRegion 0 31.83 5.32 17.03 5.60 13.20 17.84 17.07 13.53 15.17 8.09 65.53 23.73 49.11 87.86 67.29 35.64 112.01 8.79 0.00 23.12 30.24 39.83 7.54 12 E2_Da NovelBoundary 0 10.89 2.57 7.13 0.00 0.00 0.00 2.25 0.00 3.59 4.62 0.00 0.00 6.33 5.47 5.69 0.00 8.88 4.73 0.00 5.82 5.93 0.00 3.67 13 E2a_E4a KnownJunction 0 47.56 2.76 29.60 9.49 19.86 7.95 12.41 14.17 19.44 10.48 65.86 26.11 25.65 124.38 120.40 63.06 106.97 2.57 0.00 5.82 37.38 33.86 14.77 14 I2 Intron 0 3.70 1.35 3.16 3.10 2.85 2.21 3.27 3.78 4.40 3.16 4.51 5.40 19.29 7.82 4.08 6.04 13.54 3.23 0.26 7.92 4.43 6.79 4.13 15 I2_SR1 SilentIntronRegion 0 3.70 1.35 3.16 3.10 2.85 2.21 3.28 3.78 4.41 3.16 4.51 5.40 19.29 7.82 4.08 6.04 13.54 3.23 0.26 7.92 4.43 6.79 4.13 16 I2 Intron 0 5.98 1.55 2.97 2.75 5.88 4.13 4.32 2.48 4.42 3.09 4.68 3.79 16.88 9.44 2.91 6.28 12.84 3.20 0.81 6.51 5.03 6.52 4.32 17 I2_SR1 SilentIntronRegion 0 5.15 1.81 2.47 2.63 4.63 3.62 3.86 3.20 4.33 2.77 4.23 3.25 13.76 9.18 1.99 6.26 14.00 3.28 1.12 5.86 4.34 7.09 4.52 18 I2_AR1 ActiveIntronRegion 0 4.47 0.65 3.34 2.61 7.68 5.02 2.99 0.99 3.06 4.22 5.80 2.25 21.46 9.14 3.08 5.57 13.46 2.99 0.00 8.00 9.25 3.73 2.84 19 I2_SR2 SilentIntronRegion 0 7.97 1.54 3.77 3.41 9.24 5.53 7.00 1.43 6.29 4.39 4.92 7.53 26.74 11.20 4.25 7.32 9.59 3.91 0.00 7.25 5.14 6.45 5.17 20 I2_AR2 ActiveIntronRegion 0 3.48 0.00 0.00 0.00 0.00 1.51 1.09 0.00 0.00 0.00 7.95 0.00 10.21 4.64 4.07 2.44 0.00 0.00 0.00 5.25 3.59 0.00 0.00 21 I2_AR4 ActiveIntronRegion 0 13.28 0.75 6.75 3.00 6.92 4.07 3.43 1.90 2.72 0.63 5.71 0.00 8.87 8.19 8.77 5.49 15.86 1.02 2.35 9.44 4.87 8.47 3.26 22 E3_Aa NovelBoundary 0 7.41 2.96 14.04 14.68 4.33 9.88 2.25 8.58 1.16 4.75 6.90 0.00 24.67 9.71 0.00 17.00 8.70 0.00 0.00 12.46 8.59 3.06 4.35 23 ER3a ExonRegion 0 0.49 0.00 0.00 0.00 0.50 0.68 0.15 0.00 0.00 0.00 1.26 0.00 0.33 0.26 2.36 1.52 0.61 0.00 0.00 1.78 0.00 0.15 0.14 24 E3_Da NovelBoundary 0 16.37 0.00 7.30 10.55 14.43 4.66 11.70 11.83 3.15 1.67 18.43 0.00 6.82 14.83 15.20 12.65 22.16 0.00 0.00 6.07 2.35 14.27 7.60 25 E3a_E4a KnownJunction 0 7.19 0.00 1.74 1.40 0.00 2.61 0.00 1.56 0.00 0.00 2.68 0.00 0.00 0.00 0.00 4.27 0.00 1.87 0.00 3.13 0.00 0.00 0.00 26 I3 Intron 0 22.03 1.27 6.84 3.80 2.23 4.58 5.51 3.22 2.68 0.71 2.01 7.63 19.64 7.20 5.01 4.95 5.50 2.29 0.00 3.99 4.59 4.34 3.06 27 I3_AR1 ActiveIntronRegion 0 22.21 1.28 6.90 3.84 2.25 4.60 5.56 3.24 2.70 0.72 2.03 7.68 19.80 7.26 5.05 4.98 5.54 2.31 0.00 4.02 4.63 4.37 3.08 28 E4_Aa NovelBoundary 0 35.12 5.85 3.49 6.66 7.56 13.91 5.96 5.46 7.93 4.11 10.06 12.45 46.91 4.59 0.00 3.93 22.16 5.02 0.00 8.69 5.19 5.51 6.91 29 ER4a ExonRegion 0 40.78 4.76 26.90 8.79 15.97 15.59 14.61 16.28 13.08 8.03 67.75 14.06 54.67 84.83 68.58 33.37 93.46 9.37 0.87 23.54 27.64 31.52 12.58